RNA–Protein interactions for RNA: ENST00000261897.5

PRPF40B-201, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-201ENST00000261897 CUL2Q13617 745 aa16.45■□□□□ 0.22
PRPF40B-201ENST00000261897 Q3C1V9 767 aa16.45■□□□□ 0.22
PRPF40B-201ENST00000261897 C1orf220Q5T0J3 134 aa16.45■□□□□ 0.22
PRPF40B-201ENST00000261897 C6orf183Q5T699 404 aa16.45■□□□□ 0.22
PRPF40B-201ENST00000261897 LRRC8EQ6NSJ5 796 aa16.45■□□□□ 0.22
PRPF40B-201ENST00000261897 OLFML1Q6UWY5 402 aa16.45■□□□□ 0.22
PRPF40B-201ENST00000261897 MCUQ8NE86 351 aa16.45■□□□□ 0.22
PRPF40B-201ENST00000261897 FBXL8Q96CD0 374 aa16.45■□□□□ 0.22
PRPF40B-201ENST00000261897 C20orf27Q9GZN8 174 aa16.45■□□□□ 0.22
PRPF40B-201ENST00000261897 USP29Q9HBJ7 922 aa16.45■□□□□ 0.22
PRPF40B-201ENST00000261897 AGO2Q9UKV8 859 aaKnown RBP16.45■□□□□ 0.22
PRPF40B-201ENST00000261897 TRPC5Q9UL62 973 aaPredicted RBP16.45■□□□□ 0.22
PRPF40B-201ENST00000261897 C1orf232A0A0U1RR37 186 aa16.45■□□□□ 0.22
PRPF40B-201ENST00000261897 AGRPO00253 132 aa16.45■□□□□ 0.22
PRPF40B-201ENST00000261897 APOEP02649 317 aa16.45■□□□□ 0.22
PRPF40B-201ENST00000261897 CYP24A1Q07973 514 aa16.45■□□□□ 0.22
PRPF40B-201ENST00000261897 DMPKQ09013 629 aa16.45■□□□□ 0.22
PRPF40B-201ENST00000261897 MSLNQ13421 630 aaPredicted RBP16.45■□□□□ 0.22
PRPF40B-201ENST00000261897 PRPSAP1Q14558 356 aa16.45■□□□□ 0.22
PRPF40B-201ENST00000261897 WDR78Q5VTH9 848 aa16.45■□□□□ 0.22
PRPF40B-201ENST00000261897 SWSAP1Q6NVH7 229 aa16.45■□□□□ 0.22
PRPF40B-201ENST00000261897 XKR5Q6UX68 686 aa16.45■□□□□ 0.22
PRPF40B-201ENST00000261897 DCAF4Q8WV16 495 aa16.45■□□□□ 0.22
PRPF40B-201ENST00000261897 ABHD8Q96I13 439 aa16.45■□□□□ 0.22
PRPF40B-201ENST00000261897 EPS15L1Q9UBC2 864 aa16.45■□□□□ 0.22
PRPF40B-201ENST00000261897 PI4KBQ9UBF8 816 aa16.45■□□□□ 0.22
PRPF40B-201ENST00000261897 MRPL11Q9Y3B7 192 aaKnown RBP16.45■□□□□ 0.22
PRPF40B-201ENST00000261897 BCL9O00512 1426 aa16.44■□□□□ 0.22
PRPF40B-201ENST00000261897 P4HA2O15460 535 aa16.44■□□□□ 0.22
PRPF40B-201ENST00000261897 PRPSAP2O60256 369 aa16.44■□□□□ 0.22
PRPF40B-201ENST00000261897 ADSSP30520 456 aa16.44■□□□□ 0.22
PRPF40B-201ENST00000261897 RAP1GAPP47736 663 aa16.44■□□□□ 0.22
PRPF40B-201ENST00000261897 NME5P56597 212 aa16.44■□□□□ 0.22
PRPF40B-201ENST00000261897 NLRP11P59045 1033 aaKnown RBP16.44■□□□□ 0.22
PRPF40B-201ENST00000261897 MAP3K10Q02779 954 aa16.44■□□□□ 0.22
PRPF40B-201ENST00000261897 KLF1Q13351 362 aaPredicted RBP16.44■□□□□ 0.22
PRPF40B-201ENST00000261897 UBA3Q8TBC4 463 aa16.44■□□□□ 0.22
PRPF40B-201ENST00000261897 SLCO2A1Q92959 643 aa16.44■□□□□ 0.22
PRPF40B-201ENST00000261897 PLLPQ9Y342 182 aa16.44■□□□□ 0.22
PRPF40B-201ENST00000261897 K7ERI5 159 aa16.44■□□□□ 0.22
PRPF40B-201ENST00000261897 SERPINA6P08185 405 aa16.44■□□□□ 0.22
PRPF40B-201ENST00000261897 CASP2P42575 452 aa16.44■□□□□ 0.22
PRPF40B-201ENST00000261897 RAP1GDS1P52306 607 aa16.44■□□□□ 0.22
PRPF40B-201ENST00000261897 NOMO3P69849 1222 aa16.44■□□□□ 0.22
PRPF40B-201ENST00000261897 CCNIQ14094 377 aa16.44■□□□□ 0.22
PRPF40B-201ENST00000261897 FSCBQ5H9T9 825 aa16.44■□□□□ 0.22
PRPF40B-201ENST00000261897 CMC1Q7Z7K0 106 aa16.44■□□□□ 0.22
PRPF40B-201ENST00000261897 IL31RAQ8NI17 732 aa16.44■□□□□ 0.22
PRPF40B-201ENST00000261897 JOSD2Q8TAC2 188 aa16.44■□□□□ 0.22
PRPF40B-201ENST00000261897 PGLYRP2Q96PD5 576 aa16.44■□□□□ 0.22
PRPF40B-201ENST00000261897 HAUS8Q9BT25 410 aa16.44■□□□□ 0.22
PRPF40B-201ENST00000261897 LSM1O15116 133 aaKnown RBP16.44■□□□□ 0.22
PRPF40B-201ENST00000261897 KDM1AO60341 852 aa16.44■□□□□ 0.22
PRPF40B-201ENST00000261897 STIP1P31948 543 aaKnown RBP16.44■□□□□ 0.22
PRPF40B-201ENST00000261897 MTTPP55157 894 aa16.44■□□□□ 0.22
PRPF40B-201ENST00000261897 UGCGQ16739 394 aa16.44■□□□□ 0.22
PRPF40B-201ENST00000261897 TDRPQ86YL5 185 aa16.44■□□□□ 0.22
PRPF40B-201ENST00000261897 C10orf107Q8IVU9 208 aa16.44■□□□□ 0.22
PRPF40B-201ENST00000261897 RBM12BQ8IXT5 1001 aaKnown RBP16.44■□□□□ 0.22
PRPF40B-201ENST00000261897 DNAAF3Q8N9W5 541 aa16.44■□□□□ 0.22
PRPF40B-201ENST00000261897 CIB1Q99828 191 aa16.44■□□□□ 0.22
PRPF40B-201ENST00000261897 THAP1Q9NVV9 213 aa16.44■□□□□ 0.22
PRPF40B-201ENST00000261897 TMEM191BP0C7N4 346 aa16.43■□□□□ 0.22
PRPF40B-201ENST00000261897 PGGT1BP53609 377 aa16.43■□□□□ 0.22
PRPF40B-201ENST00000261897 PERM1Q5SV97 790 aa16.43■□□□□ 0.22
PRPF40B-201ENST00000261897 LDHDQ86WU2 507 aa16.43■□□□□ 0.22
PRPF40B-201ENST00000261897 NAT16Q8N8M0 369 aa16.43■□□□□ 0.22
PRPF40B-201ENST00000261897 CDKL2Q92772 493 aa16.43■□□□□ 0.22
PRPF40B-201ENST00000261897 LENG8Q96PV6 779 aaPredicted RBP16.43■□□□□ 0.22
PRPF40B-201ENST00000261897 MYPNQ86TC9 1320 aa16.43■□□□□ 0.22
PRPF40B-201ENST00000261897 POLRMTO00411 1230 aaKnown RBP16.43■□□□□ 0.22
PRPF40B-201ENST00000261897 RALBP11234 206 aa16.43■□□□□ 0.22
PRPF40B-201ENST00000261897 CYP3A7P24462 503 aa16.43■□□□□ 0.22
PRPF40B-201ENST00000261897 ITGADQ13349 1161 aa16.43■□□□□ 0.22
PRPF40B-201ENST00000261897 SLC27A3Q5K4L6 730 aa16.43■□□□□ 0.22
PRPF40B-201ENST00000261897 GRIN3AQ8TCU5 1115 aa16.43■□□□□ 0.22
PRPF40B-201ENST00000261897 RCN3Q96D15 328 aa16.43■□□□□ 0.22
PRPF40B-201ENST00000261897 ADPGKQ9BRR6 497 aa16.43■□□□□ 0.22
PRPF40B-201ENST00000261897 RAVER2Q9HCJ3 691 aaKnown RBP16.43■□□□□ 0.22
PRPF40B-201ENST00000261897 GTSE1Q9NYZ3 720 aa16.43■□□□□ 0.22
PRPF40B-201ENST00000261897 RSL24D1Q9UHA3 163 aaKnown RBP16.43■□□□□ 0.22
PRPF40B-201ENST00000261897 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.43■□□□□ 0.22
PRPF40B-201ENST00000261897 CALB1P05937 261 aa16.43■□□□□ 0.22
PRPF40B-201ENST00000261897 RBL1P28749 1068 aa16.43■□□□□ 0.22
PRPF40B-201ENST00000261897 POLR2BP30876 1174 aaKnown RBP16.43■□□□□ 0.22
PRPF40B-201ENST00000261897 CRKP46108 304 aa16.43■□□□□ 0.22
PRPF40B-201ENST00000261897 OGDHQ02218 1023 aa16.43■□□□□ 0.22
PRPF40B-201ENST00000261897 ZBTB41Q5SVQ8 909 aa16.43■□□□□ 0.22
PRPF40B-201ENST00000261897 GPR107Q5VW38 600 aa16.43■□□□□ 0.22
PRPF40B-201ENST00000261897 DUS1LQ6P1R4 473 aaKnown RBP16.43■□□□□ 0.22
PRPF40B-201ENST00000261897 BNC2Q6ZN30 1099 aaPredicted RBP16.43■□□□□ 0.22
PRPF40B-201ENST00000261897 RNF135Q8IUD6 432 aa16.43■□□□□ 0.22
PRPF40B-201ENST00000261897 SLC44A1Q8WWI5 657 aa16.43■□□□□ 0.22
PRPF40B-201ENST00000261897 MTA2O94776 668 aa16.42■□□□□ 0.22
PRPF40B-201ENST00000261897 TFAP2AP05549 437 aa16.42■□□□□ 0.22
PRPF40B-201ENST00000261897 KRT7P08729 469 aa16.42■□□□□ 0.22
PRPF40B-201ENST00000261897 CSH1P0DML2 217 aa16.42■□□□□ 0.22
PRPF40B-201ENST00000261897 CSH2P0DML3 217 aa16.42■□□□□ 0.22
PRPF40B-201ENST00000261897 UNGP13051 313 aaPredicted RBP16.42■□□□□ 0.22
PRPF40B-201ENST00000261897 COX4I1P13073 169 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms