RNA–Protein interactions for RNA: ENST00000261584.8

PALB2-201, Transcript of partner and localizer of BRCA2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PALB2, Length 4,003 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-201ENST00000261584 SOX13Q9UN79 622 aa10.44□□□□□ -0.74
PALB2-201ENST00000261584 TDRKHQ9Y2W6 561 aaKnown RBP10.44□□□□□ -0.74
PALB2-201ENST00000261584 DFFAO00273 331 aa10.44□□□□□ -0.74
PALB2-201ENST00000261584 GPD1P21695 349 aa10.44□□□□□ -0.74
PALB2-201ENST00000261584 ZNF786Q8N393 782 aa10.44□□□□□ -0.74
PALB2-201ENST00000261584 COPS5Q92905 334 aa10.44□□□□□ -0.74
PALB2-201ENST00000261584 HPDLQ96IR7 371 aa10.44□□□□□ -0.74
PALB2-201ENST00000261584 ECSITQ9BQ95 431 aa10.44□□□□□ -0.74
PALB2-201ENST00000261584 SLC7A8Q9UHI5 535 aa10.44□□□□□ -0.74
PALB2-201ENST00000261584 AKAP11Q9UKA4 1901 aa10.44□□□□□ -0.74
PALB2-201ENST00000261584 MYPNQ86TC9 1320 aa10.44□□□□□ -0.74
PALB2-201ENST00000261584 CICQ96RK0 1608 aaPredicted RBP10.44□□□□□ -0.74
PALB2-201ENST00000261584 MYO18AQ92614 2054 aaKnown RBP10.44□□□□□ -0.74
PALB2-201ENST00000261584 C4AP0C0L4 1744 aa10.44□□□□□ -0.74
PALB2-201ENST00000261584 C4BP0C0L5 1744 aa10.44□□□□□ -0.74
PALB2-201ENST00000261584 FOXD2O60548 495 aaPredicted RBP10.44□□□□□ -0.74
PALB2-201ENST00000261584 LRCH4O75427 683 aa10.44□□□□□ -0.74
PALB2-201ENST00000261584 MT-ND1P03886 318 aa10.44□□□□□ -0.74
PALB2-201ENST00000261584 ACAT1P24752 427 aaKnown RBP10.44□□□□□ -0.74
PALB2-201ENST00000261584 CXCR3P49682 368 aa10.44□□□□□ -0.74
PALB2-201ENST00000261584 CSE1LP55060 971 aaKnown RBP10.44□□□□□ -0.74
PALB2-201ENST00000261584 GBE1Q04446 702 aa10.44□□□□□ -0.74
PALB2-201ENST00000261584 ZACNQ401N2 412 aa10.44□□□□□ -0.74
PALB2-201ENST00000261584 FUT11Q495W5 492 aa10.44□□□□□ -0.74
PALB2-201ENST00000261584 SPDYAQ5MJ70 313 aa10.44□□□□□ -0.74
PALB2-201ENST00000261584 RARS2Q5T160 578 aaKnown RBP10.44□□□□□ -0.74
PALB2-201ENST00000261584 MAP3K21Q5TCX8 1036 aa10.44□□□□□ -0.74
PALB2-201ENST00000261584 KCNT2Q6UVM3 1135 aa10.44□□□□□ -0.74
PALB2-201ENST00000261584 C10orf107Q8IVU9 208 aa10.44□□□□□ -0.74
PALB2-201ENST00000261584 PHF21BQ96EK2 531 aa10.44□□□□□ -0.74
PALB2-201ENST00000261584 XPNPEP1Q9NQW7 623 aa10.44□□□□□ -0.74
PALB2-201ENST00000261584 TRPC5Q9UL62 973 aaPredicted RBP10.44□□□□□ -0.74
PALB2-201ENST00000261584 TIMM13Q9Y5L4 95 aaPredicted RBP10.44□□□□□ -0.74
PALB2-201ENST00000261584 STX16-NPEPL1H3BU86 382 aa10.43□□□□□ -0.74
PALB2-201ENST00000261584 APOEP02649 317 aa10.43□□□□□ -0.74
PALB2-201ENST00000261584 T-ENOLP0DO92 83 aa10.43□□□□□ -0.74
PALB2-201ENST00000261584 ROR2Q01974 943 aaKnown RBP10.43□□□□□ -0.74
PALB2-201ENST00000261584 RNASEH2BQ5TBB1 312 aaKnown RBP10.43□□□□□ -0.74
PALB2-201ENST00000261584 ATF7IP2Q5U623 682 aa10.43□□□□□ -0.74
PALB2-201ENST00000261584 FAM160B1Q5W0V3 765 aa10.43□□□□□ -0.74
PALB2-201ENST00000261584 EEF1DP3Q658K8 133 aa10.43□□□□□ -0.74
PALB2-201ENST00000261584 PAOXQ6QHF9 649 aa10.43□□□□□ -0.74
PALB2-201ENST00000261584 STRA8Q7Z7C7 330 aa10.43□□□□□ -0.74
PALB2-201ENST00000261584 C4orf19Q8IY42 314 aa10.43□□□□□ -0.74
PALB2-201ENST00000261584 NAT16Q8N8M0 369 aa10.43□□□□□ -0.74
PALB2-201ENST00000261584 PNPLA1Q8N8W4 532 aa10.43□□□□□ -0.74
PALB2-201ENST00000261584 ZNF333Q96JL9 665 aa10.43□□□□□ -0.74
PALB2-201ENST00000261584 TXLNGYQ9BZA5 131 aa10.43□□□□□ -0.74
PALB2-201ENST00000261584 SNX25Q9H3E2 840 aa10.43□□□□□ -0.74
PALB2-201ENST00000261584 ACSS3Q9H6R3 686 aa10.43□□□□□ -0.74
PALB2-201ENST00000261584 RSAD1Q9HA92 442 aa10.43□□□□□ -0.74
PALB2-201ENST00000261584 EPS15L1Q9UBC2 864 aa10.43□□□□□ -0.74
PALB2-201ENST00000261584 HMGXB4Q9UGU5 601 aa10.43□□□□□ -0.74
PALB2-201ENST00000261584 NUDT5Q9UKK9 219 aa10.43□□□□□ -0.74
PALB2-201ENST00000261584 CRYBG1Q9Y4K1 1723 aa10.43□□□□□ -0.74
PALB2-201ENST00000261584 IGKV6D-41A0A0C4DH26 115 aa10.43□□□□□ -0.74
PALB2-201ENST00000261584 CCDC189A1A4V9 331 aa10.43□□□□□ -0.74
PALB2-201ENST00000261584 ITM2AO43736 263 aa10.43□□□□□ -0.74
PALB2-201ENST00000261584 C6orf52Q5T4I8 152 aa10.43□□□□□ -0.74
PALB2-201ENST00000261584 MON1BQ7L1V2 547 aa10.43□□□□□ -0.74
PALB2-201ENST00000261584 KRT27Q7Z3Y8 459 aa10.43□□□□□ -0.74
PALB2-201ENST00000261584 IARS2Q9NSE4 1012 aaKnown RBP10.43□□□□□ -0.74
PALB2-201ENST00000261584 BTBD7Q9P203 1132 aa10.43□□□□□ -0.74
PALB2-201ENST00000261584 PAK5Q9P286 719 aa10.43□□□□□ -0.74
PALB2-201ENST00000261584 CLUHO75153 1309 aa10.43□□□□□ -0.74
PALB2-201ENST00000261584 TMEM191CA6NGB0 347 aa10.43□□□□□ -0.74
PALB2-201ENST00000261584 PMPCBO75439 489 aa10.43□□□□□ -0.74
PALB2-201ENST00000261584 FAM200BP0CF97 657 aa10.43□□□□□ -0.74
PALB2-201ENST00000261584 IVDP26440 423 aa10.43□□□□□ -0.74
PALB2-201ENST00000261584 CCR10P46092 362 aa10.43□□□□□ -0.74
PALB2-201ENST00000261584 NDST1P52848 882 aa10.43□□□□□ -0.74
PALB2-201ENST00000261584 NAGLUP54802 743 aa10.43□□□□□ -0.74
PALB2-201ENST00000261584 DYNC1I2Q13409 638 aaKnown RBP10.43□□□□□ -0.74
PALB2-201ENST00000261584 C16orf72Q14CZ0 275 aa10.43□□□□□ -0.74
PALB2-201ENST00000261584 TMEM198Q66K66 360 aa10.43□□□□□ -0.74
PALB2-201ENST00000261584 SLC39A4Q6P5W5 647 aa10.43□□□□□ -0.74
PALB2-201ENST00000261584 C16orf87Q6PH81 154 aa10.43□□□□□ -0.74
PALB2-201ENST00000261584 DDIASQ8IXT1 998 aa10.43□□□□□ -0.74
PALB2-201ENST00000261584 TMEM192Q8IY95 271 aa10.43□□□□□ -0.74
PALB2-201ENST00000261584 SIX6OS1Q8N1H7 587 aa10.43□□□□□ -0.74
PALB2-201ENST00000261584 MAB21L3Q8N8X9 362 aa10.43□□□□□ -0.74
PALB2-201ENST00000261584 GMCL1P1Q8NEA9 526 aa10.43□□□□□ -0.74
PALB2-201ENST00000261584 IPMKQ8NFU5 416 aa10.43□□□□□ -0.74
PALB2-201ENST00000261584 OR6Y1Q8NGX8 325 aa10.43□□□□□ -0.74
PALB2-201ENST00000261584 MAGEC3Q8TD91 643 aa10.43□□□□□ -0.74
PALB2-201ENST00000261584 OPTNQ96CV9 577 aa10.43□□□□□ -0.74
PALB2-201ENST00000261584 CCDC97Q96F63 343 aaPredicted RBP10.43□□□□□ -0.74
PALB2-201ENST00000261584 FIZ1Q96SL8 496 aa10.43□□□□□ -0.74
PALB2-201ENST00000261584 SARS2Q9NP81 518 aaKnown RBP10.43□□□□□ -0.74
PALB2-201ENST00000261584 CCDC167Q9P0B6 97 aa10.43□□□□□ -0.74
PALB2-201ENST00000261584 PDP2Q9P2J9 529 aa10.43□□□□□ -0.74
PALB2-201ENST00000261584 LNPEPQ9UIQ6 1025 aa10.43□□□□□ -0.74
PALB2-201ENST00000261584 ZNF541Q9H0D2 1346 aa10.43□□□□□ -0.74
PALB2-201ENST00000261584 CNTRLQ7Z7A1 2325 aa10.43□□□□□ -0.74
PALB2-201ENST00000261584 SPDYE2BA6NHP3 402 aa10.42□□□□□ -0.74
PALB2-201ENST00000261584 OATP04181 439 aa10.42□□□□□ -0.74
PALB2-201ENST00000261584 SPDYE6P0CI01 402 aa10.42□□□□□ -0.74
PALB2-201ENST00000261584 MAPTP10636 758 aaKnown RBP10.42□□□□□ -0.74
PALB2-201ENST00000261584 RARBP10826 455 aa10.42□□□□□ -0.74
PALB2-201ENST00000261584 NR4A1P22736 598 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms