RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 PLCL1Q15111 1095 aa13.86□□□□□ -0.19
PRPF38A-201ENST00000257181 LLGL2Q6P1M3 1020 aa13.86□□□□□ -0.19
PRPF38A-201ENST00000257181 LGI2Q8N0V4 545 aa13.86□□□□□ -0.19
PRPF38A-201ENST00000257181 TNIP2Q8NFZ5 429 aa13.86□□□□□ -0.19
PRPF38A-201ENST00000257181 FAM172AQ8WUF8 416 aa13.86□□□□□ -0.19
PRPF38A-201ENST00000257181 EEF2KMTQ96G04 330 aa13.86□□□□□ -0.19
PRPF38A-201ENST00000257181 ATP13A3Q9H7F0 1226 aa13.86□□□□□ -0.19
PRPF38A-201ENST00000257181 BUB1BO60566 1050 aaPredicted RBP13.86□□□□□ -0.19
PRPF38A-201ENST00000257181 ARSEP51690 589 aa13.86□□□□□ -0.19
PRPF38A-201ENST00000257181 SPIRE1Q08AE8 756 aa13.86□□□□□ -0.19
PRPF38A-201ENST00000257181 CLEC16AQ2KHT3 1053 aa13.86□□□□□ -0.19
PRPF38A-201ENST00000257181 SERPINA13PQ6UXR4 307 aa13.86□□□□□ -0.19
PRPF38A-201ENST00000257181 CASKIN2Q8WXE0 1202 aa13.86□□□□□ -0.19
PRPF38A-201ENST00000257181 UBE2E3Q969T4 207 aa13.86□□□□□ -0.19
PRPF38A-201ENST00000257181 KRCC1Q9NPI7 259 aaPredicted RBP13.86□□□□□ -0.19
PRPF38A-201ENST00000257181 PSMD12O00232 456 aaPredicted RBP13.86□□□□□ -0.19
PRPF38A-201ENST00000257181 CACNB4O00305 520 aaPredicted RBP13.86□□□□□ -0.19
PRPF38A-201ENST00000257181 EIF3HO15372 352 aaKnown RBP eCLIP13.86□□□□□ -0.19
PRPF38A-201ENST00000257181 B4GALT4O60513 344 aa13.86□□□□□ -0.19
PRPF38A-201ENST00000257181 HNRNPA1P09651 372 aaKnown RBP eCLIP13.86□□□□□ -0.19
PRPF38A-201ENST00000257181 YBX3P16989 372 aaKnown RBP eCLIP13.86□□□□□ -0.195e-7■□□□□ 8.6
PRPF38A-201ENST00000257181 ZNF7P17097 686 aaPredicted RBP13.86□□□□□ -0.19
PRPF38A-201ENST00000257181 GALCP54803 685 aa13.86□□□□□ -0.19
PRPF38A-201ENST00000257181 CAPSQ13938 189 aa13.86□□□□□ -0.19
PRPF38A-201ENST00000257181 COBLL1Q53SF7 1204 aa13.86□□□□□ -0.19
PRPF38A-201ENST00000257181 IZUMO3Q5VZ72 239 aa13.86□□□□□ -0.19
PRPF38A-201ENST00000257181 KIAA1324Q6UXG2 1013 aaKnown RBP13.86□□□□□ -0.19
PRPF38A-201ENST00000257181 ANKRD52Q8NB46 1076 aa13.86□□□□□ -0.19
PRPF38A-201ENST00000257181 SLC35G2Q8TBE7 412 aa13.86□□□□□ -0.19
PRPF38A-201ENST00000257181 OSBPL8Q9BZF1 889 aa13.86□□□□□ -0.19
PRPF38A-201ENST00000257181 CTDNEP1O95476 244 aa13.86□□□□□ -0.19
PRPF38A-201ENST00000257181 HPCAP84074 193 aa13.86□□□□□ -0.19
PRPF38A-201ENST00000257181 ZNF792Q3KQV3 632 aa13.86□□□□□ -0.19
PRPF38A-201ENST00000257181 FUT10Q6P4F1 479 aa13.86□□□□□ -0.19
PRPF38A-201ENST00000257181 CCDC137Q6PK04 289 aaKnown RBP13.86□□□□□ -0.19
PRPF38A-201ENST00000257181 COPS5Q92905 334 aa13.86□□□□□ -0.19
PRPF38A-201ENST00000257181 CACNA1FO60840 1977 aa13.85□□□□□ -0.19
PRPF38A-201ENST00000257181 TTC26A0AVF1 554 aa13.85□□□□□ -0.19
PRPF38A-201ENST00000257181 CLASP2O75122 1294 aaKnown RBP13.85□□□□□ -0.19
PRPF38A-201ENST00000257181 SYF2O95926 243 aaKnown RBP13.85□□□□□ -0.19
PRPF38A-201ENST00000257181 CXCR2P25025 360 aa13.85□□□□□ -0.19
PRPF38A-201ENST00000257181 TYK2P29597 1187 aa13.85□□□□□ -0.19
PRPF38A-201ENST00000257181 OR1E1P30953 314 aa13.85□□□□□ -0.19
PRPF38A-201ENST00000257181 NPY2RP49146 381 aa13.85□□□□□ -0.19
PRPF38A-201ENST00000257181 RAP1GDS1P52306 607 aa13.85□□□□□ -0.19
PRPF38A-201ENST00000257181 EOGTQ5NDL2 527 aa13.85□□□□□ -0.19
PRPF38A-201ENST00000257181 SV2AQ7L0J3 742 aa13.85□□□□□ -0.19
PRPF38A-201ENST00000257181 PPIL6Q8IXY8 311 aa13.85□□□□□ -0.19
PRPF38A-201ENST00000257181 SNX31Q8N9S9 440 aa13.85□□□□□ -0.19
PRPF38A-201ENST00000257181 ARNTL2Q8WYA1 636 aa13.85□□□□□ -0.19
PRPF38A-201ENST00000257181 ACBD6Q9BR61 282 aa13.85□□□□□ -0.19
PRPF38A-201ENST00000257181 DOT1LQ8TEK3 1739 aa13.85□□□□□ -0.19
PRPF38A-201ENST00000257181 SOWAHDA6NJG2 315 aa13.85□□□□□ -0.19
PRPF38A-201ENST00000257181 XPO1O14980 1071 aaKnown RBP13.85□□□□□ -0.19
PRPF38A-201ENST00000257181 RARGP13631 454 aa13.85□□□□□ -0.19
PRPF38A-201ENST00000257181 RBM10P98175 930 aaKnown RBP13.85□□□□□ -0.19
PRPF38A-201ENST00000257181 MED21Q13503 144 aa13.85□□□□□ -0.19
PRPF38A-201ENST00000257181 TAB3Q8N5C8 712 aaPredicted RBP13.85□□□□□ -0.19
PRPF38A-201ENST00000257181 ARHGEF2Q92974 986 aaKnown RBP13.85□□□□□ -0.19
PRPF38A-201ENST00000257181 ARMC7Q9H6L4 198 aa13.85□□□□□ -0.19
PRPF38A-201ENST00000257181 ABCF3Q9NUQ8 709 aa13.85□□□□□ -0.19
PRPF38A-201ENST00000257181 A0A1W2PQ45 241 aaPredicted RBP13.85□□□□□ -0.19
PRPF38A-201ENST00000257181 A0A1W2PQY0 241 aa13.85□□□□□ -0.19
PRPF38A-201ENST00000257181 FAM205CA6NFA0 338 aa13.85□□□□□ -0.19
PRPF38A-201ENST00000257181 PRNPP04156 253 aa13.85□□□□□ -0.19
PRPF38A-201ENST00000257181 GFAPP14136 432 aa13.85□□□□□ -0.19
PRPF38A-201ENST00000257181 ITGAXP20702 1163 aa13.85□□□□□ -0.19
PRPF38A-201ENST00000257181 C1QTNF8P60827 252 aa13.85□□□□□ -0.19
PRPF38A-201ENST00000257181 GPR158Q5T848 1215 aa13.85□□□□□ -0.19
PRPF38A-201ENST00000257181 HASPINQ8TF76 798 aa13.85□□□□□ -0.19
PRPF38A-201ENST00000257181 QRFPRQ96P65 431 aa13.85□□□□□ -0.19
PRPF38A-201ENST00000257181 HEMGNQ9BXL5 484 aa13.85□□□□□ -0.19
PRPF38A-201ENST00000257181 SENP2Q9HC62 589 aa13.85□□□□□ -0.19
PRPF38A-201ENST00000257181 GMEB2Q9UKD1 530 aa13.85□□□□□ -0.19
PRPF38A-201ENST00000257181 FHOD1Q9Y613 1164 aa13.85□□□□□ -0.19
PRPF38A-201ENST00000257181 DAB1O75553 588 aa13.85□□□□□ -0.19
PRPF38A-201ENST00000257181 RHOBTB1O94844 696 aa13.85□□□□□ -0.19
PRPF38A-201ENST00000257181 KRT20P35900 424 aa13.85□□□□□ -0.19
PRPF38A-201ENST00000257181 ZC3H14Q6PJT7 736 aaKnown RBP13.85□□□□□ -0.19
PRPF38A-201ENST00000257181 CAPN12Q6ZSI9 719 aa13.85□□□□□ -0.19
PRPF38A-201ENST00000257181 GPIHBP1Q8IV16 184 aa13.85□□□□□ -0.19
PRPF38A-201ENST00000257181 KCTD13Q8WZ19 329 aa13.85□□□□□ -0.19
PRPF38A-201ENST00000257181 CBWD1Q9BRT8 395 aa13.85□□□□□ -0.19
PRPF38A-201ENST00000257181 URADA6NGE7 173 aa13.84□□□□□ -0.19
PRPF38A-201ENST00000257181 ERICH4A6NGS2 130 aa13.84□□□□□ -0.19
PRPF38A-201ENST00000257181 CBX4O00257 560 aa13.84□□□□□ -0.19
PRPF38A-201ENST00000257181 ART3Q13508 389 aa13.84□□□□□ -0.19
PRPF38A-201ENST00000257181 C7orf43Q8WVR3 580 aa13.84□□□□□ -0.19
PRPF38A-201ENST00000257181 STARD8Q92502 1023 aa13.84□□□□□ -0.19
PRPF38A-201ENST00000257181 WNT8BQ93098 351 aa13.84□□□□□ -0.19
PRPF38A-201ENST00000257181 POLR1EQ9GZS1 481 aaKnown RBP13.84□□□□□ -0.19
PRPF38A-201ENST00000257181 AFF4Q9UHB7 1163 aaKnown RBP13.84□□□□□ -0.19
PRPF38A-201ENST00000257181 GNGT2O14610 69 aa13.84□□□□□ -0.19
PRPF38A-201ENST00000257181 PDIA2Q13087 525 aaKnown RBP13.84□□□□□ -0.19
PRPF38A-201ENST00000257181 KIF19Q2TAC6 998 aa13.84□□□□□ -0.19
PRPF38A-201ENST00000257181 SPDYE7PQ495Y7 208 aa13.84□□□□□ -0.19
PRPF38A-201ENST00000257181 B3GALNT2Q8NCR0 500 aa13.84□□□□□ -0.19
PRPF38A-201ENST00000257181 ACRBPQ8NEB7 543 aa13.84□□□□□ -0.19
PRPF38A-201ENST00000257181 GTSE1Q9NYZ3 720 aa13.84□□□□□ -0.19
PRPF38A-201ENST00000257181 PITPNM1O00562 1244 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms