RNA–Protein interactions for RNA: ENST00000255448.8

DCLK1-201, Transcript of doublecortin like kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DCLK1, Length 5,703 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DCLK1-201ENST00000255448 FAM32AQ9Y421 112 aaKnown RBP11.28□□□□□ -0.6
DCLK1-201ENST00000255448 IL18RAPO95256 599 aa11.28□□□□□ -0.6
DCLK1-201ENST00000255448 CD4P01730 458 aa11.28□□□□□ -0.6
DCLK1-201ENST00000255448 TNFRSF8P28908 595 aa11.28□□□□□ -0.6
DCLK1-201ENST00000255448 GNL1P36915 607 aaPredicted RBP11.28□□□□□ -0.6
DCLK1-201ENST00000255448 SLC25A3Q00325 362 aa11.28□□□□□ -0.6
DCLK1-201ENST00000255448 PARP6Q2NL67 630 aa11.28□□□□□ -0.6
DCLK1-201ENST00000255448 C11orf63Q6NUN7 778 aa11.28□□□□□ -0.6
DCLK1-201ENST00000255448 MPP6Q9NZW5 540 aa11.28□□□□□ -0.6
DCLK1-201ENST00000255448 MOSPD1Q9UJG1 213 aa11.28□□□□□ -0.6
DCLK1-201ENST00000255448 HEATR9A2RTY3 570 aa11.28□□□□□ -0.6
DCLK1-201ENST00000255448 HBP1O60381 514 aa11.28□□□□□ -0.6
DCLK1-201ENST00000255448 ME2P23368 584 aa11.28□□□□□ -0.6
DCLK1-201ENST00000255448 ADRA1DP25100 572 aa11.28□□□□□ -0.6
DCLK1-201ENST00000255448 PSMC6P62333 389 aa11.28□□□□□ -0.6
DCLK1-201ENST00000255448 SEL1L3Q68CR1 1132 aa11.28□□□□□ -0.6
DCLK1-201ENST00000255448 RRM2BQ7LG56 351 aa11.28□□□□□ -0.6
DCLK1-201ENST00000255448 PPHLN1Q8NEY8 458 aaKnown RBP11.28□□□□□ -0.6
DCLK1-201ENST00000255448 SH3TC2Q8TF17 1288 aa11.28□□□□□ -0.6
DCLK1-201ENST00000255448 PDCD6IPQ8WUM4 868 aaKnown RBP11.28□□□□□ -0.6
DCLK1-201ENST00000255448 GPRASP2Q96D09 838 aa11.28□□□□□ -0.6
DCLK1-201ENST00000255448 MCEEQ96PE7 176 aa11.28□□□□□ -0.6
DCLK1-201ENST00000255448 REEP2Q9BRK0 252 aa11.28□□□□□ -0.6
DCLK1-201ENST00000255448 PAK5Q9P286 719 aa11.28□□□□□ -0.6
DCLK1-201ENST00000255448 UBA6A0AVT1 1052 aaPredicted RBP11.27□□□□□ -0.6
DCLK1-201ENST00000255448 RRN3P2A6NIE6 340 aa11.27□□□□□ -0.6
DCLK1-201ENST00000255448 EIF3DO15371 548 aaKnown RBP eCLIP11.27□□□□□ -0.6
DCLK1-201ENST00000255448 RALBP11234 206 aa11.27□□□□□ -0.6
DCLK1-201ENST00000255448 NME5P56597 212 aa11.27□□□□□ -0.6
DCLK1-201ENST00000255448 ANTXR2P58335 489 aa11.27□□□□□ -0.6
DCLK1-201ENST00000255448 WDR72Q3MJ13 1102 aa11.27□□□□□ -0.6
DCLK1-201ENST00000255448 SAMD3Q8N6K7 520 aa11.27□□□□□ -0.6
DCLK1-201ENST00000255448 EGFL8Q99944 293 aa11.27□□□□□ -0.6
DCLK1-201ENST00000255448 TMEM39BQ9GZU3 492 aa11.27□□□□□ -0.6
DCLK1-201ENST00000255448 VPS33BQ9H267 617 aa11.27□□□□□ -0.6
DCLK1-201ENST00000255448 PRMT7Q9NVM4 692 aaPredicted RBP11.27□□□□□ -0.6
DCLK1-201ENST00000255448 ERAP1Q9NZ08 941 aa11.27□□□□□ -0.6
DCLK1-201ENST00000255448 KANSL1LA0AUZ9 987 aa11.27□□□□□ -0.61
DCLK1-201ENST00000255448 GAS2O43903 313 aaKnown RBP11.27□□□□□ -0.61
DCLK1-201ENST00000255448 IMPDH2P12268 514 aa11.27□□□□□ -0.61
DCLK1-201ENST00000255448 PRKCEQ02156 737 aa11.27□□□□□ -0.61
DCLK1-201ENST00000255448 TMEM132DQ14C87 1099 aa11.27□□□□□ -0.61
DCLK1-201ENST00000255448 FAM45BPQ6NSW5 357 aa11.27□□□□□ -0.61
DCLK1-201ENST00000255448 NUDT18Q6ZVK8 323 aa11.27□□□□□ -0.61
DCLK1-201ENST00000255448 CLEC10AQ8IUN9 316 aa11.27□□□□□ -0.61
DCLK1-201ENST00000255448 ELMO2Q96JJ3 720 aa11.27□□□□□ -0.61
DCLK1-201ENST00000255448 NUDT12Q9BQG2 462 aa11.27□□□□□ -0.61
DCLK1-201ENST00000255448 MTG1Q9BT17 334 aaPredicted RBP11.27□□□□□ -0.61
DCLK1-201ENST00000255448 SLC39A10Q9ULF5 831 aa11.27□□□□□ -0.61
DCLK1-201ENST00000255448 AGAP1Q9UPQ3 857 aa11.27□□□□□ -0.61
DCLK1-201ENST00000255448 RPA1P27694 616 aa11.27□□□□□ -0.61
DCLK1-201ENST00000255448 TP53BP2Q13625 1128 aa11.27□□□□□ -0.61
DCLK1-201ENST00000255448 TRIP4Q15650 581 aaPredicted RBP11.27□□□□□ -0.61
DCLK1-201ENST00000255448 CARTPTQ16568 116 aa11.27□□□□□ -0.61
DCLK1-201ENST00000255448 LRRC8DQ7L1W4 858 aa11.27□□□□□ -0.61
DCLK1-201ENST00000255448 APPL2Q8NEU8 664 aa11.27□□□□□ -0.61
DCLK1-201ENST00000255448 INTS13Q9NVM9 706 aa11.27□□□□□ -0.61
DCLK1-201ENST00000255448 RPL26L1Q9UNX3 145 aaKnown RBP11.27□□□□□ -0.61
DCLK1-201ENST00000255448 C15orf38-AP3S2A0A0A6YYH1 394 aa11.27□□□□□ -0.61
DCLK1-201ENST00000255448 SEC24AO95486 1093 aa11.27□□□□□ -0.61
DCLK1-201ENST00000255448 FCGR1AP12314 374 aa11.27□□□□□ -0.61
DCLK1-201ENST00000255448 UQCRBP14927 111 aa11.27□□□□□ -0.61
DCLK1-201ENST00000255448 FXR2P51116 673 aaKnown RBP eCLIP11.27□□□□□ -0.61
DCLK1-201ENST00000255448 PKNOX1P55347 436 aa11.27□□□□□ -0.61
DCLK1-201ENST00000255448 KCNT1Q5JUK3 1230 aa11.27□□□□□ -0.61
DCLK1-201ENST00000255448 TRIQKQ629K1 86 aa11.27□□□□□ -0.61
DCLK1-201ENST00000255448 ARPINQ7Z6K5 226 aa11.27□□□□□ -0.61
DCLK1-201ENST00000255448 SPATA2LQ8IUW3 424 aaPredicted RBP11.27□□□□□ -0.61
DCLK1-201ENST00000255448 FBXW8Q8N3Y1 598 aa11.27□□□□□ -0.61
DCLK1-201ENST00000255448 DRAXINQ8NBI3 349 aaPredicted RBP11.27□□□□□ -0.61
DCLK1-201ENST00000255448 KLHL32Q96NJ5 620 aa11.27□□□□□ -0.61
DCLK1-201ENST00000255448 SEPHS2Q99611 448 aa11.27□□□□□ -0.61
DCLK1-201ENST00000255448 APOL4Q9BPW4 351 aa11.27□□□□□ -0.61
DCLK1-201ENST00000255448 CIDEBQ9UHD4 219 aa11.27□□□□□ -0.61
DCLK1-201ENST00000255448 DDX3XO00571 662 aaKnown RBP eCLIP11.26□□□□□ -0.61
DCLK1-201ENST00000255448 NELFEP18615 380 aaKnown RBP11.26□□□□□ -0.61
DCLK1-201ENST00000255448 CCNA2P20248 432 aa11.26□□□□□ -0.61
DCLK1-201ENST00000255448 SKIV2L2P42285 1042 aaKnown RBP11.26□□□□□ -0.61
DCLK1-201ENST00000255448 HSD17B4P51659 736 aa11.26□□□□□ -0.61
DCLK1-201ENST00000255448 GTF2A2P52657 109 aa11.26□□□□□ -0.61
DCLK1-201ENST00000255448 AUHQ13825 339 aaKnown RBP11.26□□□□□ -0.61
DCLK1-201ENST00000255448 DGCR6Q14129 220 aa11.26□□□□□ -0.61
DCLK1-201ENST00000255448 TTI2Q6NXR4 508 aa11.26□□□□□ -0.61
DCLK1-201ENST00000255448 MAB21L3Q8N8X9 362 aa11.26□□□□□ -0.61
DCLK1-201ENST00000255448 DAGLBQ8NCG7 672 aa11.26□□□□□ -0.61
DCLK1-201ENST00000255448 OR7A2PQ8NGA2 310 aa11.26□□□□□ -0.61
DCLK1-201ENST00000255448 TMEM143Q96AN5 459 aa11.26□□□□□ -0.61
DCLK1-201ENST00000255448 ACSF2Q96CM8 615 aaPredicted RBP11.26□□□□□ -0.61
DCLK1-201ENST00000255448 THUMPD3Q9BV44 507 aaKnown RBP11.26□□□□□ -0.61
DCLK1-201ENST00000255448 NINJ2Q9NZG7 142 aa11.26□□□□□ -0.61
DCLK1-201ENST00000255448 GPC6Q9Y625 555 aaPredicted RBP11.26□□□□□ -0.61
DCLK1-201ENST00000255448 CELF2O95319 508 aaKnown RBP11.26□□□□□ -0.61
DCLK1-201ENST00000255448 NPEPPSP55786 919 aa11.26□□□□□ -0.61
DCLK1-201ENST00000255448 CNPY1Q3B7I2 92 aa11.26□□□□□ -0.61
DCLK1-201ENST00000255448 FAXCQ5TGI0 409 aa11.26□□□□□ -0.61
DCLK1-201ENST00000255448 SAPCD2Q86UD0 394 aa11.26□□□□□ -0.61
DCLK1-201ENST00000255448 CCDC28BQ9BUN5 200 aa11.26□□□□□ -0.61
DCLK1-201ENST00000255448 AP4B1Q9Y6B7 739 aa11.26□□□□□ -0.61
DCLK1-201ENST00000255448 RIMS1Q86UR5 1692 aaKnown RBP11.26□□□□□ -0.61
DCLK1-201ENST00000255448 FOXN3O00409 490 aaPredicted RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms