RNA–Protein interactions for RNA: ENST00000252699.6

ACTN4-201, Transcript of actinin alpha 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ACTN4, Length 4,963 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-201ENST00000252699 CST3P01034 146 aaPredicted RBP17.6■□□□□ 0.41
ACTN4-201ENST00000252699 ITGA7Q13683 1181 aa17.6■□□□□ 0.41
ACTN4-201ENST00000252699 NOMO2Q5JPE7 1267 aa17.6■□□□□ 0.41
ACTN4-201ENST00000252699 HELQQ8TDG4 1101 aa17.6■□□□□ 0.41
ACTN4-201ENST00000252699 WNT8BQ93098 351 aa17.6■□□□□ 0.41
ACTN4-201ENST00000252699 SMPD4Q9NXE4 827 aa17.6■□□□□ 0.41
ACTN4-201ENST00000252699 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.6■□□□□ 0.41
ACTN4-201ENST00000252699 PYGLP06737 847 aa17.6■□□□□ 0.41
ACTN4-201ENST00000252699 RHOCP08134 193 aa17.6■□□□□ 0.41
ACTN4-201ENST00000252699 TUBP50607 506 aa17.6■□□□□ 0.41
ACTN4-201ENST00000252699 ZNF143P52747 638 aaPredicted RBP17.6■□□□□ 0.41
ACTN4-201ENST00000252699 ZRANB3Q5FWF4 1079 aa17.6■□□□□ 0.41
ACTN4-201ENST00000252699 HGSNATQ68CP4 663 aa17.6■□□□□ 0.41
ACTN4-201ENST00000252699 TEPSINQ96N21 525 aa17.6■□□□□ 0.41
ACTN4-201ENST00000252699 UPF3AQ9H1J1 476 aaKnown RBP17.6■□□□□ 0.41
ACTN4-201ENST00000252699 HSD3B7Q9H2F3 369 aa17.6■□□□□ 0.41
ACTN4-201ENST00000252699 BCAS3Q9H6U6 928 aa17.6■□□□□ 0.41
ACTN4-201ENST00000252699 NT5MQ9NPB1 228 aa17.6■□□□□ 0.41
ACTN4-201ENST00000252699 TCHHQ07283 1943 aa17.6■□□□□ 0.41
ACTN4-201ENST00000252699 ASMTLO95671 621 aa17.6■□□□□ 0.41
ACTN4-201ENST00000252699 FAM153BP0C7A2 387 aa17.6■□□□□ 0.41
ACTN4-201ENST00000252699 FAM153CQ494X1 144 aa17.6■□□□□ 0.41
ACTN4-201ENST00000252699 PTRHD1Q6GMV3 140 aaKnown RBP17.6■□□□□ 0.41
ACTN4-201ENST00000252699 KCNT2Q6UVM3 1135 aa17.6■□□□□ 0.41
ACTN4-201ENST00000252699 UNC45BQ8IWX7 931 aa17.6■□□□□ 0.41
ACTN4-201ENST00000252699 DAW1Q8N136 415 aa17.6■□□□□ 0.41
ACTN4-201ENST00000252699 CARNMT1Q8N4J0 409 aa17.6■□□□□ 0.41
ACTN4-201ENST00000252699 ARMC2Q8NEN0 867 aa17.6■□□□□ 0.41
ACTN4-201ENST00000252699 PBXIP1Q96AQ6 731 aa17.6■□□□□ 0.41
ACTN4-201ENST00000252699 FAM153AQ9UHL3 310 aa17.6■□□□□ 0.41
ACTN4-201ENST00000252699 VPS28Q9UK41 221 aa17.6■□□□□ 0.41
ACTN4-201ENST00000252699 GIT1Q9Y2X7 761 aa17.6■□□□□ 0.41
ACTN4-201ENST00000252699 PKP3Q9Y446 797 aa17.6■□□□□ 0.41
ACTN4-201ENST00000252699 GPR25O00155 361 aa17.59■□□□□ 0.41
ACTN4-201ENST00000252699 YBX3P16989 372 aaKnown RBP eCLIP17.59■□□□□ 0.411e-8■■□□□ 12.8
ACTN4-201ENST00000252699 LRRC38Q5VT99 294 aa17.59■□□□□ 0.41
ACTN4-201ENST00000252699 HTR3CQ8WXA8 447 aa17.59■□□□□ 0.41
ACTN4-201ENST00000252699 C18orf25Q96B23 403 aaPredicted RBP17.59■□□□□ 0.41
ACTN4-201ENST00000252699 NTPCRQ9BSD7 190 aaKnown RBP17.59■□□□□ 0.41
ACTN4-201ENST00000252699 CDH9Q9ULB4 789 aa17.59■□□□□ 0.41
ACTN4-201ENST00000252699 GNGT2O14610 69 aa17.59■□□□□ 0.41
ACTN4-201ENST00000252699 C4BPAP04003 597 aaKnown RBP17.59■□□□□ 0.41
ACTN4-201ENST00000252699 MYL2P10916 166 aa17.59■□□□□ 0.41
ACTN4-201ENST00000252699 PECAM1P16284 738 aaPredicted RBP17.59■□□□□ 0.41
ACTN4-201ENST00000252699 AVPR1AP37288 418 aa17.59■□□□□ 0.41
ACTN4-201ENST00000252699 HIRAP54198 1017 aaPredicted RBP17.59■□□□□ 0.41
ACTN4-201ENST00000252699 POLD3Q15054 466 aaPredicted RBP17.59■□□□□ 0.41
ACTN4-201ENST00000252699 GIPC2Q8TF65 315 aa17.59■□□□□ 0.41
ACTN4-201ENST00000252699 PPP1R36Q96LQ0 422 aa17.59■□□□□ 0.41
ACTN4-201ENST00000252699 TMBIM4Q9HC24 238 aa17.59■□□□□ 0.41
ACTN4-201ENST00000252699 EML4Q9HC35 981 aaKnown RBP17.59■□□□□ 0.41
ACTN4-201ENST00000252699 DMAC2Q9NW81 257 aa17.59■□□□□ 0.41
ACTN4-201ENST00000252699 DHX15O43143 795 aaKnown RBP17.59■□□□□ 0.41
ACTN4-201ENST00000252699 OPHN1O60890 802 aa17.59■□□□□ 0.41
ACTN4-201ENST00000252699 RPL9P32969 192 aaKnown RBP17.59■□□□□ 0.41
ACTN4-201ENST00000252699 TUFMP49411 452 aaKnown RBP17.59■□□□□ 0.41
ACTN4-201ENST00000252699 THEMIS2Q5TEJ8 643 aa17.59■□□□□ 0.41
ACTN4-201ENST00000252699 PCDHB18PQ96TA0 734 aa17.59■□□□□ 0.41
ACTN4-201ENST00000252699 PAFAH2Q99487 392 aa17.59■□□□□ 0.41
ACTN4-201ENST00000252699 TKTL2Q9H0I9 626 aa17.59■□□□□ 0.41
ACTN4-201ENST00000252699 ZNF112Q9UJU3 913 aa17.59■□□□□ 0.41
ACTN4-201ENST00000252699 PCDHA2Q9Y5H9 948 aa17.59■□□□□ 0.41
ACTN4-201ENST00000252699 H0Y3Z8 333 aa17.59■□□□□ 0.41
ACTN4-201ENST00000252699 AMHP03971 560 aa17.59■□□□□ 0.41
ACTN4-201ENST00000252699 HADHAP40939 763 aa17.59■□□□□ 0.41
ACTN4-201ENST00000252699 FTHL17Q9BXU8 183 aa17.59■□□□□ 0.41
ACTN4-201ENST00000252699 SAE1Q9UBE0 346 aaPredicted RBP17.59■□□□□ 0.41
ACTN4-201ENST00000252699 USH1CQ9Y6N9 552 aa17.59■□□□□ 0.41
ACTN4-201ENST00000252699 SMIM28A0A1B0GU29 152 aa17.58■□□□□ 0.41
ACTN4-201ENST00000252699 NR2C2P49116 596 aa17.58■□□□□ 0.41
ACTN4-201ENST00000252699 DNAJC3Q13217 504 aa17.58■□□□□ 0.41
ACTN4-201ENST00000252699 MARC1Q5VT66 337 aa17.58■□□□□ 0.41
ACTN4-201ENST00000252699 CAPNS2Q96L46 248 aa17.58■□□□□ 0.41
ACTN4-201ENST00000252699 FAM111AQ96PZ2 611 aa17.58■□□□□ 0.41
ACTN4-201ENST00000252699 ECT2Q9H8V3 914 aa17.58■□□□□ 0.41
ACTN4-201ENST00000252699 OLA1Q9NTK5 396 aaKnown RBP17.58■□□□□ 0.41
ACTN4-201ENST00000252699 CBX4O00257 560 aa17.58■□□□□ 0.4
ACTN4-201ENST00000252699 KIF3CO14782 793 aa17.58■□□□□ 0.4
ACTN4-201ENST00000252699 RTN3O95197 1032 aaPredicted RBP17.58■□□□□ 0.4
ACTN4-201ENST00000252699 MYL4P12829 197 aa17.58■□□□□ 0.4
ACTN4-201ENST00000252699 UROC1Q96N76 676 aa17.58■□□□□ 0.4
ACTN4-201ENST00000252699 FICDQ9BVA6 458 aa17.58■□□□□ 0.4
ACTN4-201ENST00000252699 PDZD7Q9H5P4 517 aa17.58■□□□□ 0.4
ACTN4-201ENST00000252699 TXNRD2Q9NNW7 524 aa17.58■□□□□ 0.4
ACTN4-201ENST00000252699 NUP188Q5SRE5 1749 aa17.58■□□□□ 0.4
ACTN4-201ENST00000252699 RAMP2O60895 175 aa17.58■□□□□ 0.4
ACTN4-201ENST00000252699 ASGR1P07306 291 aa17.58■□□□□ 0.4
ACTN4-201ENST00000252699 HIST1H2AGP0C0S8 130 aaPredicted RBP17.58■□□□□ 0.4
ACTN4-201ENST00000252699 HIST1H2ADP20671 130 aa17.58■□□□□ 0.4
ACTN4-201ENST00000252699 TMC3Q7Z5M5 1100 aa17.58■□□□□ 0.4
ACTN4-201ENST00000252699 ITIH5Q86UX2 942 aa17.58■□□□□ 0.4
ACTN4-201ENST00000252699 E2F7Q96AV8 911 aa17.58■□□□□ 0.4
ACTN4-201ENST00000252699 HIST1H2AHQ96KK5 128 aa17.58■□□□□ 0.4
ACTN4-201ENST00000252699 HIST1H2AJQ99878 128 aa17.58■□□□□ 0.4
ACTN4-201ENST00000252699 H2AFJQ9BTM1 129 aa17.58■□□□□ 0.4
ACTN4-201ENST00000252699 GOLGA2P5Q9HBQ8 144 aa17.58■□□□□ 0.4
ACTN4-201ENST00000252699 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.58■□□□□ 0.4
ACTN4-201ENST00000252699 TUBGCP4Q9UGJ1 667 aa17.58■□□□□ 0.4
ACTN4-201ENST00000252699 CHRM3P20309 590 aa17.58■□□□□ 0.4
ACTN4-201ENST00000252699 RBBP7Q16576 425 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms