RNA–Protein interactions for RNA: ENST00000251739.9

VPS50-201, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS50, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-201ENST00000251739 GPRIN1Q7Z2K8 1008 aa10.91□□□□□ -0.66
VPS50-201ENST00000251739 CYP2U1Q7Z449 544 aa10.91□□□□□ -0.66
VPS50-201ENST00000251739 ACOT1Q86TX2 421 aa10.91□□□□□ -0.66
VPS50-201ENST00000251739 UNC93AQ86WB7 457 aa10.91□□□□□ -0.66
VPS50-201ENST00000251739 BBS7Q8IWZ6 715 aa10.91□□□□□ -0.66
VPS50-201ENST00000251739 TERB1Q8NA31 727 aa10.91□□□□□ -0.66
VPS50-201ENST00000251739 SLC2A14Q8TDB8 520 aa10.91□□□□□ -0.66
VPS50-201ENST00000251739 WHAMMQ8TF30 809 aa10.91□□□□□ -0.66
VPS50-201ENST00000251739 PAGE5Q96GU1 130 aa10.91□□□□□ -0.66
VPS50-201ENST00000251739 CYLDQ9NQC7 956 aa10.91□□□□□ -0.66
VPS50-201ENST00000251739 CHORDC1Q9UHD1 332 aaPredicted RBP10.91□□□□□ -0.66
VPS50-201ENST00000251739 EVLQ9UI08 416 aaPredicted RBP10.91□□□□□ -0.66
VPS50-201ENST00000251739 MBD1Q9UIS9 605 aaPredicted RBP10.91□□□□□ -0.66
VPS50-201ENST00000251739 HPSEQ9Y251 543 aa10.91□□□□□ -0.66
VPS50-201ENST00000251739 DMXL2Q8TDJ6 3036 aa10.91□□□□□ -0.66
VPS50-201ENST00000251739 ITPR1Q14643 2758 aa10.9□□□□□ -0.66
VPS50-201ENST00000251739 FAM237AA0A1B0GTK4 181 aa10.9□□□□□ -0.66
VPS50-201ENST00000251739 C4orf47A7E2U8 309 aa10.9□□□□□ -0.66
VPS50-201ENST00000251739 MAPK13O15264 365 aa10.9□□□□□ -0.66
VPS50-201ENST00000251739 CACNG3O60359 315 aa10.9□□□□□ -0.66
VPS50-201ENST00000251739 TLR5O60602 858 aa10.9□□□□□ -0.66
VPS50-201ENST00000251739 MYL1P05976 194 aa10.9□□□□□ -0.66
VPS50-201ENST00000251739 NDST1P52848 882 aa10.9□□□□□ -0.66
VPS50-201ENST00000251739 DNM1Q05193 864 aaKnown RBP10.9□□□□□ -0.66
VPS50-201ENST00000251739 GAD2Q05329 585 aa10.9□□□□□ -0.66
VPS50-201ENST00000251739 ORC1Q13415 861 aa10.9□□□□□ -0.66
VPS50-201ENST00000251739 NFIL3Q16649 462 aa10.9□□□□□ -0.66
VPS50-201ENST00000251739 SGSM1Q2NKQ1 1148 aa10.9□□□□□ -0.66
VPS50-201ENST00000251739 FOXD4L6Q3SYB3 417 aaPredicted RBP10.9□□□□□ -0.66
VPS50-201ENST00000251739 SPDYCQ5MJ68 293 aa10.9□□□□□ -0.66
VPS50-201ENST00000251739 EOGTQ5NDL2 527 aa10.9□□□□□ -0.66
VPS50-201ENST00000251739 FOXD4L3Q6VB84 417 aaPredicted RBP10.9□□□□□ -0.66
VPS50-201ENST00000251739 CLEC20AQ6ZU45 233 aa10.9□□□□□ -0.66
VPS50-201ENST00000251739 HTR3DQ70Z44 454 aa10.9□□□□□ -0.66
VPS50-201ENST00000251739 TMEM25Q86YD3 366 aa10.9□□□□□ -0.66
VPS50-201ENST00000251739 MIB1Q86YT6 1006 aa10.9□□□□□ -0.66
VPS50-201ENST00000251739 CEP57L1Q8IYX8 460 aa10.9□□□□□ -0.66
VPS50-201ENST00000251739 RLN3Q8WXF3 142 aa10.9□□□□□ -0.66
VPS50-201ENST00000251739 TWNKQ96RR1 684 aa10.9□□□□□ -0.66
VPS50-201ENST00000251739 SPSB2Q99619 263 aa10.9□□□□□ -0.66
VPS50-201ENST00000251739 HNRNPABQ99729 332 aaKnown RBP10.9□□□□□ -0.66
VPS50-201ENST00000251739 KLF16Q9BXK1 252 aaPredicted RBP10.9□□□□□ -0.66
VPS50-201ENST00000251739 PNPLA8Q9NP80 782 aa10.9□□□□□ -0.66
VPS50-201ENST00000251739 ZDHHC4Q9NPG8 344 aa10.9□□□□□ -0.66
VPS50-201ENST00000251739 SPHK2Q9NRA0 654 aa10.9□□□□□ -0.66
VPS50-201ENST00000251739 EXOC1Q9NV70 894 aa10.9□□□□□ -0.66
VPS50-201ENST00000251739 OSER1Q9NX31 292 aa10.9□□□□□ -0.66
VPS50-201ENST00000251739 MARK1Q9P0L2 795 aa10.9□□□□□ -0.66
VPS50-201ENST00000251739 TRAF3IP3Q9Y228 551 aa10.9□□□□□ -0.66
VPS50-201ENST00000251739 STARD13Q9Y3M8 1113 aa10.9□□□□□ -0.66
VPS50-201ENST00000251739 MUC22E2RYF6 1773 aaPredicted RBP10.9□□□□□ -0.67
VPS50-201ENST00000251739 ATRXP46100 2492 aa10.89□□□□□ -0.67
VPS50-201ENST00000251739 A0A1W2PQF6 199 aa10.89□□□□□ -0.67
VPS50-201ENST00000251739 GIPC1O14908 333 aa10.89□□□□□ -0.67
VPS50-201ENST00000251739 KHNYNO15037 678 aaKnown RBP10.89□□□□□ -0.67
VPS50-201ENST00000251739 TRIM24O15164 1050 aa10.89□□□□□ -0.67
VPS50-201ENST00000251739 ALDH1A2O94788 518 aa10.89□□□□□ -0.67
VPS50-201ENST00000251739 TBX18O95935 607 aa10.89□□□□□ -0.67
VPS50-201ENST00000251739 HLA-DRAP01903 254 aa10.89□□□□□ -0.67
VPS50-201ENST00000251739 P4HA1P13674 534 aa10.89□□□□□ -0.67
VPS50-201ENST00000251739 PFKFB1P16118 471 aa10.89□□□□□ -0.67
VPS50-201ENST00000251739 CSRP1P21291 193 aaKnown RBP10.89□□□□□ -0.67
VPS50-201ENST00000251739 HOXD12P35452 270 aa10.89□□□□□ -0.67
VPS50-201ENST00000251739 PTGER3P43115 390 aa10.89□□□□□ -0.67
VPS50-201ENST00000251739 ENPEPQ07075 957 aa10.89□□□□□ -0.67
VPS50-201ENST00000251739 SPOPLQ6IQ16 392 aa10.89□□□□□ -0.67
VPS50-201ENST00000251739 PSAPL1Q6NUJ1 521 aa10.89□□□□□ -0.67
VPS50-201ENST00000251739 KLHDC10Q6PID8 442 aa10.89□□□□□ -0.67
VPS50-201ENST00000251739 FRMD1Q8N878 549 aa10.89□□□□□ -0.67
VPS50-201ENST00000251739 ZNF513Q8N8E2 541 aaPredicted RBP10.89□□□□□ -0.67
VPS50-201ENST00000251739 C12orf29Q8N999 325 aa10.89□□□□□ -0.67
VPS50-201ENST00000251739 HMGB4Q8WW32 186 aa10.89□□□□□ -0.67
VPS50-201ENST00000251739 P2RY11Q96G91 374 aa10.89□□□□□ -0.67
VPS50-201ENST00000251739 MED10Q9BTT4 135 aa10.89□□□□□ -0.67
VPS50-201ENST00000251739 FBXO44Q9H4M3 255 aa10.89□□□□□ -0.67
VPS50-201ENST00000251739 NMUR1Q9HB89 426 aa10.89□□□□□ -0.67
VPS50-201ENST00000251739 APOBEC3GQ9HC16 384 aaKnown RBP10.89□□□□□ -0.67
VPS50-201ENST00000251739 POLMQ9NP87 494 aaPredicted RBP10.89□□□□□ -0.67
VPS50-201ENST00000251739 TMEM9BQ9NQ34 198 aa10.89□□□□□ -0.67
VPS50-201ENST00000251739 FAM49BQ9NUQ9 324 aa10.89□□□□□ -0.67
VPS50-201ENST00000251739 DEC1Q9P2X7 70 aa10.89□□□□□ -0.67
VPS50-201ENST00000251739 USP25Q9UHP3 1055 aa10.89□□□□□ -0.67
VPS50-201ENST00000251739 CFAP45Q9UL16 551 aa10.89□□□□□ -0.67
VPS50-201ENST00000251739 SCML2Q9UQR0 700 aa10.89□□□□□ -0.67
VPS50-201ENST00000251739 SH3BP1Q9Y3L3 701 aa10.89□□□□□ -0.67
VPS50-201ENST00000251739 FREM2Q5SZK8 3169 aa10.88□□□□□ -0.67
VPS50-201ENST00000251739 CACNA1GO43497 2377 aa10.88□□□□□ -0.67
VPS50-201ENST00000251739 TCRBV21S2A2A0A5A6 115 aa10.88□□□□□ -0.67
VPS50-201ENST00000251739 CYP26A1O43174 497 aa10.88□□□□□ -0.67
VPS50-201ENST00000251739 CILPO75339 1184 aa10.88□□□□□ -0.67
VPS50-201ENST00000251739 RHOBTB3O94955 611 aa10.88□□□□□ -0.67
VPS50-201ENST00000251739 FAM200BP0CF97 657 aa10.88□□□□□ -0.67
VPS50-201ENST00000251739 GABRG2P18507 467 aa10.88□□□□□ -0.67
VPS50-201ENST00000251739 CMA1P23946 247 aa10.88□□□□□ -0.67
VPS50-201ENST00000251739 DHPSP49366 369 aaPredicted RBP10.88□□□□□ -0.67
VPS50-201ENST00000251739 NOVA1P51513 510 aaKnown RBP10.88□□□□□ -0.67
VPS50-201ENST00000251739 MAP3K7CLP57077 242 aa10.88□□□□□ -0.67
VPS50-201ENST00000251739 IRX4P78413 519 aa10.88□□□□□ -0.67
VPS50-201ENST00000251739 PPP3CAQ08209 521 aa10.88□□□□□ -0.67
VPS50-201ENST00000251739 ZCWPW2Q504Y3 356 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms