RNA–Protein interactions for RNA: ENST00000249299.6

LSM8-201, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-201ENST00000249299 ZDHHC7Q9NXF8 308 aa13.51□□□□□ -0.25
LSM8-201ENST00000249299 ZMYM5Q9UJ78 669 aa13.51□□□□□ -0.25
LSM8-201ENST00000249299 CDC23Q9UJX2 597 aa13.51□□□□□ -0.25
LSM8-201ENST00000249299 ZNF487B1APH4 448 aa13.5□□□□□ -0.25
LSM8-201ENST00000249299 DDX3YO15523 660 aaKnown RBP13.5□□□□□ -0.25
LSM8-201ENST00000249299 PRPSAP2O60256 369 aa13.5□□□□□ -0.25
LSM8-201ENST00000249299 ZMYND10O75800 440 aa13.5□□□□□ -0.25
LSM8-201ENST00000249299 GJB6O95452 261 aa13.5□□□□□ -0.25
LSM8-201ENST00000249299 IGLV3-25P01717 112 aa13.5□□□□□ -0.25
LSM8-201ENST00000249299 LRG1P02750 347 aa13.5□□□□□ -0.25
LSM8-201ENST00000249299 C8AP07357 584 aa13.5□□□□□ -0.25
LSM8-201ENST00000249299 CA8P35219 290 aa13.5□□□□□ -0.25
LSM8-201ENST00000249299 RDXP35241 583 aaKnown RBP13.5□□□□□ -0.25
LSM8-201ENST00000249299 CETN2P41208 172 aa13.5□□□□□ -0.25
LSM8-201ENST00000249299 GPR15P49685 360 aa13.5□□□□□ -0.25
LSM8-201ENST00000249299 TWF1Q12792 350 aa13.5□□□□□ -0.25
LSM8-201ENST00000249299 TAF10Q12962 218 aa13.5□□□□□ -0.25
LSM8-201ENST00000249299 EIF4EBP2Q13542 120 aaPredicted RBP13.5□□□□□ -0.25
LSM8-201ENST00000249299 TAF12Q16514 161 aa13.5□□□□□ -0.25
LSM8-201ENST00000249299 WHAMMP3Q1A5X7 153 aa13.5□□□□□ -0.25
LSM8-201ENST00000249299 DNAJB7Q7Z6W7 309 aaPredicted RBP13.5□□□□□ -0.25
LSM8-201ENST00000249299 STKLD1Q8NE28 680 aa13.5□□□□□ -0.25
LSM8-201ENST00000249299 EXD1Q8NHP7 514 aa13.5□□□□□ -0.25
LSM8-201ENST00000249299 RNF139Q8WU17 664 aa13.5□□□□□ -0.25
LSM8-201ENST00000249299 ARNTL2Q8WYA1 636 aa13.5□□□□□ -0.25
LSM8-201ENST00000249299 OSBPL9Q96SU4 736 aa13.5□□□□□ -0.25
LSM8-201ENST00000249299 NAP1L3Q99457 506 aaPredicted RBP13.5□□□□□ -0.25
LSM8-201ENST00000249299 SMOC2Q9H3U7 446 aa13.5□□□□□ -0.25
LSM8-201ENST00000249299 PRDM16Q9HAZ2 1276 aa13.5□□□□□ -0.25
LSM8-201ENST00000249299 RRAGDQ9NQL2 400 aaPredicted RBP13.5□□□□□ -0.25
LSM8-201ENST00000249299 MTUS1Q9ULD2 1270 aa13.5□□□□□ -0.25
LSM8-201ENST00000249299 USP18Q9UMW8 372 aa13.5□□□□□ -0.25
LSM8-201ENST00000249299 EFR3BQ9Y2G0 817 aa13.5□□□□□ -0.25
LSM8-201ENST00000249299 COL4A4P53420 1690 aaPredicted RBP13.5□□□□□ -0.25
LSM8-201ENST00000249299 FAM170AA1A519 330 aa13.49□□□□□ -0.25
LSM8-201ENST00000249299 TMEM110-MUSTN1A8MSY1 372 aa13.49□□□□□ -0.25
LSM8-201ENST00000249299 ENC1O14682 589 aa13.49□□□□□ -0.25
LSM8-201ENST00000249299 MDM4O15151 490 aa13.49□□□□□ -0.25
LSM8-201ENST00000249299 GRAP2O75791 330 aa13.49□□□□□ -0.25
LSM8-201ENST00000249299 URI1O94763 535 aaPredicted RBP13.49□□□□□ -0.25
LSM8-201ENST00000249299 ZRANB2O95218 330 aaKnown RBP eCLIP13.49□□□□□ -0.25
LSM8-201ENST00000249299 SLC2A3P11169 496 aa13.49□□□□□ -0.25
LSM8-201ENST00000249299 MIPP30301 263 aa13.49□□□□□ -0.25
LSM8-201ENST00000249299 IRS1P35568 1242 aa13.49□□□□□ -0.25
LSM8-201ENST00000249299 EPHA5P54756 1037 aa13.49□□□□□ -0.25
LSM8-201ENST00000249299 HDAC4P56524 1084 aa13.49□□□□□ -0.25
LSM8-201ENST00000249299 USP46P62068 366 aa13.49□□□□□ -0.25
LSM8-201ENST00000249299 TUBB4BP68371 445 aa13.49□□□□□ -0.25
LSM8-201ENST00000249299 SLC25A11Q02978 314 aaKnown RBP13.49□□□□□ -0.25
LSM8-201ENST00000249299 DUSP6Q16828 381 aa13.49□□□□□ -0.25
LSM8-201ENST00000249299 BRMS1LQ5PSV4 323 aa13.49□□□□□ -0.25
LSM8-201ENST00000249299 HFE2Q6ZVN8 426 aa13.49□□□□□ -0.25
LSM8-201ENST00000249299 SND1Q7KZF4 910 aaKnown RBP eCLIP13.49□□□□□ -0.25
LSM8-201ENST00000249299 RCOR2Q8IZ40 523 aa13.49□□□□□ -0.25
LSM8-201ENST00000249299 RASGEF1CQ8N431 466 aa13.49□□□□□ -0.25
LSM8-201ENST00000249299 ARFGAP1Q8N6T3 406 aa13.49□□□□□ -0.25
LSM8-201ENST00000249299 CMASQ8NFW8 434 aaPredicted RBP13.49□□□□□ -0.25
LSM8-201ENST00000249299 SLC7A14Q8TBB6 771 aa13.49□□□□□ -0.25
LSM8-201ENST00000249299 ACTRT1Q8TDG2 376 aa13.49□□□□□ -0.25
LSM8-201ENST00000249299 KCNV2Q8TDN2 545 aa13.49□□□□□ -0.25
LSM8-201ENST00000249299 FAM172AQ8WUF8 416 aa13.49□□□□□ -0.25
LSM8-201ENST00000249299 PTCD2Q8WV60 388 aaKnown RBP13.49□□□□□ -0.25
LSM8-201ENST00000249299 NTAN1Q96AB6 310 aa13.49□□□□□ -0.25
LSM8-201ENST00000249299 RBM41Q96IZ5 413 aaKnown RBP13.49□□□□□ -0.25
LSM8-201ENST00000249299 RPGRIP1Q96KN7 1286 aa13.49□□□□□ -0.25
LSM8-201ENST00000249299 ZNF512Q96ME7 567 aaPredicted RBP13.49□□□□□ -0.25
LSM8-201ENST00000249299 CFAP57Q96MR6 1250 aa13.49□□□□□ -0.25
LSM8-201ENST00000249299 SERPINB11Q96P15 392 aa13.49□□□□□ -0.25
LSM8-201ENST00000249299 GOLPH3Q9H4A6 298 aa13.49□□□□□ -0.25
LSM8-201ENST00000249299 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.49□□□□□ -0.25
LSM8-201ENST00000249299 TRPM5Q9NZQ8 1165 aa13.49□□□□□ -0.25
LSM8-201ENST00000249299 NAALADL1Q9UQQ1 740 aa13.49□□□□□ -0.25
LSM8-201ENST00000249299 PATJQ8NI35 1801 aa13.49□□□□□ -0.25
LSM8-201ENST00000249299 RANBP2P49792 3224 aaKnown RBP13.48□□□□□ -0.25
LSM8-201ENST00000249299 CLUHO75153 1309 aa13.48□□□□□ -0.25
LSM8-201ENST00000249299 A0A1W2PQH9 124 aa13.48□□□□□ -0.25
LSM8-201ENST00000249299 ZNF840PA6NDX5 716 aa13.48□□□□□ -0.25
LSM8-201ENST00000249299 M0QYT0 321 aa13.48□□□□□ -0.25
LSM8-201ENST00000249299 KCNK3O14649 394 aa13.48□□□□□ -0.25
LSM8-201ENST00000249299 XYLBO75191 536 aa13.48□□□□□ -0.25
LSM8-201ENST00000249299 SOAT2O75908 522 aa13.48□□□□□ -0.25
LSM8-201ENST00000249299 TRUB2O95900 331 aaKnown RBP13.48□□□□□ -0.25
LSM8-201ENST00000249299 CDC25CP30307 473 aa13.48□□□□□ -0.25
LSM8-201ENST00000249299 PTPN7P35236 360 aa13.48□□□□□ -0.25
LSM8-201ENST00000249299 CXCR3P49682 368 aa13.48□□□□□ -0.25
LSM8-201ENST00000249299 SULT1E1P49888 294 aa13.48□□□□□ -0.25
LSM8-201ENST00000249299 ITIH3Q06033 890 aa13.48□□□□□ -0.25
LSM8-201ENST00000249299 RING1Q06587 406 aa13.48□□□□□ -0.25
LSM8-201ENST00000249299 CKAP4Q07065 602 aaKnown RBP13.48□□□□□ -0.25
LSM8-201ENST00000249299 SCAPQ12770 1279 aa13.48□□□□□ -0.25
LSM8-201ENST00000249299 PPP2R5DQ14738 602 aa13.48□□□□□ -0.25
LSM8-201ENST00000249299 PDK2Q15119 407 aa13.48□□□□□ -0.25
LSM8-201ENST00000249299 ARL13BQ3SXY8 428 aa13.48□□□□□ -0.25
LSM8-201ENST00000249299 PPM1LQ5SGD2 360 aa13.48□□□□□ -0.25
LSM8-201ENST00000249299 SDHAF4Q5VUM1 108 aa13.48□□□□□ -0.25
LSM8-201ENST00000249299 SYPL2Q5VXT5 272 aa13.48□□□□□ -0.25
LSM8-201ENST00000249299 SPRED2Q7Z698 418 aa13.48□□□□□ -0.25
LSM8-201ENST00000249299 MAP7D3Q8IWC1 876 aa13.48□□□□□ -0.25
LSM8-201ENST00000249299 FAM71BQ8TC56 605 aa13.48□□□□□ -0.25
LSM8-201ENST00000249299 GIPC2Q8TF65 315 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms