RNA–Protein interactions for RNA: ENST00000241393.3

CXCR4-201, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CXCR4, Length 1,682 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-201ENST00000241393 FPR2P25090 351 aa8.37□□□□□ -1.07
CXCR4-201ENST00000241393 YWHABP31946 246 aaKnown RBP8.37□□□□□ -1.07
CXCR4-201ENST00000241393 HSD17B3P37058 310 aa8.37□□□□□ -1.07
CXCR4-201ENST00000241393 MAGEA9P43362 315 aa8.37□□□□□ -1.07
CXCR4-201ENST00000241393 GP2P55259 537 aaKnown RBP8.37□□□□□ -1.07
CXCR4-201ENST00000241393 EIF3BP55884 814 aaKnown RBP8.37□□□□□ -1.07
CXCR4-201ENST00000241393 RNASE9P60153 205 aaKnown RBP8.37□□□□□ -1.07
CXCR4-201ENST00000241393 GPC5P78333 572 aa8.37□□□□□ -1.07
CXCR4-201ENST00000241393 MRPS9P82933 396 aaKnown RBP8.37□□□□□ -1.07
CXCR4-201ENST00000241393 LACTBP83111 547 aaPredicted RBP8.37□□□□□ -1.07
CXCR4-201ENST00000241393 C1orf220Q5T0J3 134 aa8.37□□□□□ -1.07
CXCR4-201ENST00000241393 AGBL2Q5U5Z8 902 aa8.37□□□□□ -1.07
CXCR4-201ENST00000241393 SLC30A10Q6XR72 485 aa8.37□□□□□ -1.07
CXCR4-201ENST00000241393 B4GALNT4Q76KP1 1039 aa8.37□□□□□ -1.07
CXCR4-201ENST00000241393 HAUS6Q7Z4H7 955 aa8.37□□□□□ -1.07
CXCR4-201ENST00000241393 FAM71AQ8IYT1 594 aa8.37□□□□□ -1.07
CXCR4-201ENST00000241393 UBL4BQ8N7F7 174 aa8.37□□□□□ -1.07
CXCR4-201ENST00000241393 C3orf20Q8ND61 904 aa8.37□□□□□ -1.07
CXCR4-201ENST00000241393 IL31RAQ8NI17 732 aa8.37□□□□□ -1.07
CXCR4-201ENST00000241393 PHOSPHO1Q8TCT1 267 aa8.37□□□□□ -1.07
CXCR4-201ENST00000241393 KCNN1Q92952 543 aa8.37□□□□□ -1.07
CXCR4-201ENST00000241393 TTC1Q99614 292 aa8.37□□□□□ -1.07
CXCR4-201ENST00000241393 AP1M1Q9BXS5 423 aa8.37□□□□□ -1.07
CXCR4-201ENST00000241393 DDX47Q9H0S4 455 aaKnown RBP8.37□□□□□ -1.07
CXCR4-201ENST00000241393 GOLPH3Q9H4A6 298 aa8.37□□□□□ -1.07
CXCR4-201ENST00000241393 UBE2TQ9NPD8 197 aaPredicted RBP8.37□□□□□ -1.07
CXCR4-201ENST00000241393 RSPH14Q9UHP6 348 aa8.37□□□□□ -1.07
CXCR4-201ENST00000241393 FEZ2Q9UHY8 353 aaPredicted RBP8.37□□□□□ -1.07
CXCR4-201ENST00000241393 KCNG1Q9UIX4 513 aa8.37□□□□□ -1.07
CXCR4-201ENST00000241393 ADAMTS6Q9UKP5 1117 aa8.37□□□□□ -1.07
CXCR4-201ENST00000241393 ATP8A1Q9Y2Q0 1164 aa8.37□□□□□ -1.07
CXCR4-201ENST00000241393 COQ6Q9Y2Z9 468 aa8.37□□□□□ -1.07
CXCR4-201ENST00000241393 NFS1Q9Y697 457 aa8.37□□□□□ -1.07
CXCR4-201ENST00000241393 ASTN2O75129 1339 aaPredicted RBP8.36□□□□□ -1.07
CXCR4-201ENST00000241393 IGSF9BQ9UPX0 1349 aa8.36□□□□□ -1.07
CXCR4-201ENST00000241393 ALG1L2C9J202 215 aa8.36□□□□□ -1.07
CXCR4-201ENST00000241393 H0YCG3 227 aa8.36□□□□□ -1.07
CXCR4-201ENST00000241393 CBX4O00257 560 aa8.36□□□□□ -1.07
CXCR4-201ENST00000241393 PSPNO60542 156 aa8.36□□□□□ -1.07
CXCR4-201ENST00000241393 CTNND1O60716 968 aaKnown RBP8.36□□□□□ -1.07
CXCR4-201ENST00000241393 ZBED4O75132 1171 aa8.36□□□□□ -1.07
CXCR4-201ENST00000241393 ZBTB7AO95365 584 aa8.36□□□□□ -1.07
CXCR4-201ENST00000241393 FGGP02679 453 aa8.36□□□□□ -1.07
CXCR4-201ENST00000241393 CYBBP04839 570 aa8.36□□□□□ -1.07
CXCR4-201ENST00000241393 CKMP06732 381 aa8.36□□□□□ -1.07
CXCR4-201ENST00000241393 MYZAPP0CAP1 466 aa8.36□□□□□ -1.07
CXCR4-201ENST00000241393 PYGMP11217 842 aa8.36□□□□□ -1.07
CXCR4-201ENST00000241393 TACR1P25103 407 aa8.36□□□□□ -1.07
CXCR4-201ENST00000241393 CHRNA3P32297 505 aa8.36□□□□□ -1.07
CXCR4-201ENST00000241393 MFAP3P55082 362 aa8.36□□□□□ -1.07
CXCR4-201ENST00000241393 PPP3CAQ08209 521 aa8.36□□□□□ -1.07
CXCR4-201ENST00000241393 PKN3Q6P5Z2 889 aa8.36□□□□□ -1.07
CXCR4-201ENST00000241393 MIGA2Q7L4E1 593 aa8.36□□□□□ -1.07
CXCR4-201ENST00000241393 ENOSF1Q7L5Y1 443 aa8.36□□□□□ -1.07
CXCR4-201ENST00000241393 OTOP3Q7RTS5 596 aa8.36□□□□□ -1.07
CXCR4-201ENST00000241393 CROCCP2Q86T23 111 aa8.36□□□□□ -1.07
CXCR4-201ENST00000241393 ATG4DQ86TL0 474 aaPredicted RBP8.36□□□□□ -1.07
CXCR4-201ENST00000241393 PASD1Q8IV76 773 aa8.36□□□□□ -1.07
CXCR4-201ENST00000241393 BCAS4Q8TDM0 211 aa8.36□□□□□ -1.07
CXCR4-201ENST00000241393 SHC3Q92529 594 aa8.36□□□□□ -1.07
CXCR4-201ENST00000241393 KIFAP3Q92845 792 aa8.36□□□□□ -1.07
CXCR4-201ENST00000241393 ARHGEF26Q96DR7 871 aa8.36□□□□□ -1.07
CXCR4-201ENST00000241393 PDCD2LQ9BRP1 358 aa8.36□□□□□ -1.07
CXCR4-201ENST00000241393 CBWD1Q9BRT8 395 aa8.36□□□□□ -1.07
CXCR4-201ENST00000241393 NTPCRQ9BSD7 190 aaKnown RBP8.36□□□□□ -1.07
CXCR4-201ENST00000241393 JAM3Q9BX67 310 aa8.36□□□□□ -1.07
CXCR4-201ENST00000241393 GLIS2Q9BZE0 524 aaPredicted RBP8.36□□□□□ -1.07
CXCR4-201ENST00000241393 THAP2Q9H0W7 228 aa8.36□□□□□ -1.07
CXCR4-201ENST00000241393 WNT8AQ9H1J5 351 aa8.36□□□□□ -1.07
CXCR4-201ENST00000241393 SLC6A20Q9NP91 592 aa8.36□□□□□ -1.07
CXCR4-201ENST00000241393 UVRAGQ9P2Y5 699 aa8.36□□□□□ -1.07
CXCR4-201ENST00000241393 AMACRQ9UHK6 382 aa8.36□□□□□ -1.07
CXCR4-201ENST00000241393 RASAL2Q9UJF2 1139 aa8.36□□□□□ -1.07
CXCR4-201ENST00000241393 GGA2Q9UJY4 613 aa8.36□□□□□ -1.07
CXCR4-201ENST00000241393 DDX39AO00148 427 aaKnown RBP8.35□□□□□ -1.07
CXCR4-201ENST00000241393 WNT10BO00744 389 aa8.35□□□□□ -1.07
CXCR4-201ENST00000241393 ABLIM1O14639 778 aa8.35□□□□□ -1.07
CXCR4-201ENST00000241393 HGSO14964 777 aaPredicted RBP8.35□□□□□ -1.07
CXCR4-201ENST00000241393 TTI1O43156 1089 aa8.35□□□□□ -1.07
CXCR4-201ENST00000241393 DAPK3O43293 454 aa8.35□□□□□ -1.07
CXCR4-201ENST00000241393 ZC3H11AO75152 810 aaKnown RBP eCLIP8.35□□□□□ -1.07
CXCR4-201ENST00000241393 PPFIA2O75334 1257 aa8.35□□□□□ -1.07
CXCR4-201ENST00000241393 FTLP02792 175 aaPredicted RBP8.35□□□□□ -1.07
CXCR4-201ENST00000241393 ALAS1P13196 640 aa8.35□□□□□ -1.07
CXCR4-201ENST00000241393 VCAM1P19320 739 aa8.35□□□□□ -1.07
CXCR4-201ENST00000241393 ABCB4P21439 1286 aa8.35□□□□□ -1.07
CXCR4-201ENST00000241393 CTNNA2P26232 953 aa8.35□□□□□ -1.07
CXCR4-201ENST00000241393 PMLP29590 882 aa8.35□□□□□ -1.07
CXCR4-201ENST00000241393 GPC3P51654 580 aa8.35□□□□□ -1.07
CXCR4-201ENST00000241393 OAZ1P54368 228 aa8.35□□□□□ -1.07
CXCR4-201ENST00000241393 ZNF280AP59817 542 aaPredicted RBP8.35□□□□□ -1.07
CXCR4-201ENST00000241393 RPS6P62753 249 aaKnown RBP8.35□□□□□ -1.07
CXCR4-201ENST00000241393 DR1Q01658 176 aa8.35□□□□□ -1.07
CXCR4-201ENST00000241393 PGM5Q15124 567 aa8.35□□□□□ -1.07
CXCR4-201ENST00000241393 UAP1Q16222 522 aaPredicted RBP8.35□□□□□ -1.07
CXCR4-201ENST00000241393 CEP85LQ5SZL2 805 aa8.35□□□□□ -1.07
CXCR4-201ENST00000241393 DCAF12L1Q5VU92 463 aa8.35□□□□□ -1.07
CXCR4-201ENST00000241393 DUPD1Q68J44 220 aa8.35□□□□□ -1.07
CXCR4-201ENST00000241393 KRT39Q6A163 491 aa8.35□□□□□ -1.07
CXCR4-201ENST00000241393 PAQR3Q6TCH7 311 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms