RNA–Protein interactions for RNA: ENST00000225742.13

SMARCD2-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 1 (best) BASIC

Gene SMARCD2, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-201ENST00000225742 OR6J1Q8NGC5 347 aa22.8■■□□□ 1.24
SMARCD2-201ENST00000225742 TSSK1BQ9BXA7 367 aa22.8■■□□□ 1.24
SMARCD2-201ENST00000225742 ZFP69BQ9UJL9 534 aa22.8■■□□□ 1.24
SMARCD2-201ENST00000225742 TRIM33Q9UPN9 1127 aa22.8■■□□□ 1.24
SMARCD2-201ENST00000225742 TRIP11Q15643 1979 aa22.8■■□□□ 1.24
SMARCD2-201ENST00000225742 GOLGA8RI6L899 631 aa22.8■■□□□ 1.24
SMARCD2-201ENST00000225742 GABBR2O75899 941 aa22.8■■□□□ 1.24
SMARCD2-201ENST00000225742 SMPD1P17405 629 aa22.8■■□□□ 1.24
SMARCD2-201ENST00000225742 MAP2K2P36507 400 aa22.8■■□□□ 1.24
SMARCD2-201ENST00000225742 AGAP11Q8TF27 550 aa22.8■■□□□ 1.24
SMARCD2-201ENST00000225742 THOC1Q96FV9 657 aaKnown RBP22.8■■□□□ 1.24
SMARCD2-201ENST00000225742 HSFY1Q96LI6 401 aa22.8■■□□□ 1.24
SMARCD2-201ENST00000225742 QKIQ96PU8 341 aaKnown RBP eCLIP22.8■■□□□ 1.24
SMARCD2-201ENST00000225742 XAB2Q9HCS7 855 aaKnown RBP22.8■■□□□ 1.24
SMARCD2-201ENST00000225742 NPHS2Q9NP85 383 aa22.8■■□□□ 1.24
SMARCD2-201ENST00000225742 SLC5A4Q9NY91 659 aa22.8■■□□□ 1.24
SMARCD2-201ENST00000225742 RCOR3Q9P2K3 495 aaPredicted RBP22.8■■□□□ 1.24
SMARCD2-201ENST00000225742 LNPEPQ9UIQ6 1025 aa22.8■■□□□ 1.24
SMARCD2-201ENST00000225742 STK38LQ9Y2H1 464 aa22.8■■□□□ 1.24
SMARCD2-201ENST00000225742 MTO1Q9Y2Z2 717 aaKnown RBP22.8■■□□□ 1.24
SMARCD2-201ENST00000225742 NME7Q9Y5B8 376 aa22.8■■□□□ 1.24
SMARCD2-201ENST00000225742 PDCD11Q14690 1871 aaKnown RBP22.79■■□□□ 1.24
SMARCD2-201ENST00000225742 C11orf97A0A1B0GVM6 126 aaPredicted RBP22.79■■□□□ 1.24
SMARCD2-201ENST00000225742 A8MXQ7 604 aa22.79■■□□□ 1.24
SMARCD2-201ENST00000225742 HACD1B0YJ81 288 aa22.79■■□□□ 1.24
SMARCD2-201ENST00000225742 XPOTO43592 962 aaKnown RBP22.79■■□□□ 1.24
SMARCD2-201ENST00000225742 APOEP02649 317 aa22.79■■□□□ 1.24
SMARCD2-201ENST00000225742 PNPLA4P41247 253 aa22.79■■□□□ 1.24
SMARCD2-201ENST00000225742 E2F5Q15329 346 aa22.79■■□□□ 1.24
SMARCD2-201ENST00000225742 SOWAHAQ2M3V2 549 aa22.79■■□□□ 1.24
SMARCD2-201ENST00000225742 BZW1Q7L1Q6 419 aaKnown RBP22.79■■□□□ 1.24
SMARCD2-201ENST00000225742 PSTKQ8IV42 348 aaKnown RBP22.79■■□□□ 1.24
SMARCD2-201ENST00000225742 ZNF560Q96MR9 790 aa22.79■■□□□ 1.24
SMARCD2-201ENST00000225742 KLF6Q99612 283 aaPredicted RBP22.79■■□□□ 1.24
SMARCD2-201ENST00000225742 GDAP2Q9NXN4 497 aa22.79■■□□□ 1.24
SMARCD2-201ENST00000225742 NOP53Q9NZM5 478 aaKnown RBP22.79■■□□□ 1.24
SMARCD2-201ENST00000225742 TUBGCP4Q9UGJ1 667 aa22.79■■□□□ 1.24
SMARCD2-201ENST00000225742 WDR91A4D1P6 747 aa22.78■■□□□ 1.24
SMARCD2-201ENST00000225742 DCAF8L1A6NGE4 600 aa22.78■■□□□ 1.24
SMARCD2-201ENST00000225742 COPEO14579 308 aa22.78■■□□□ 1.24
SMARCD2-201ENST00000225742 PPEF2O14830 753 aa22.78■■□□□ 1.24
SMARCD2-201ENST00000225742 AVILO75366 819 aa22.78■■□□□ 1.24
SMARCD2-201ENST00000225742 GPR32O75388 356 aa22.78■■□□□ 1.24
SMARCD2-201ENST00000225742 PYGBP11216 843 aa22.78■■□□□ 1.24
SMARCD2-201ENST00000225742 CCNFP41002 786 aa22.78■■□□□ 1.24
SMARCD2-201ENST00000225742 KIZQ2M2Z5 673 aa22.78■■□□□ 1.24
SMARCD2-201ENST00000225742 CYS1Q717R9 158 aa22.78■■□□□ 1.24
SMARCD2-201ENST00000225742 STRADAQ7RTN6 431 aa22.78■■□□□ 1.24
SMARCD2-201ENST00000225742 IQCGQ9H095 443 aaKnown RBP22.78■■□□□ 1.24
SMARCD2-201ENST00000225742 ABHD16BQ9H3Z7 469 aa22.78■■□□□ 1.24
SMARCD2-201ENST00000225742 SMIM35A0A1B0GVV1 85 aa22.78■■□□□ 1.24
SMARCD2-201ENST00000225742 TRIM49D1C9J1S8 452 aa22.78■■□□□ 1.24
SMARCD2-201ENST00000225742 PDHXO00330 501 aa22.78■■□□□ 1.24
SMARCD2-201ENST00000225742 PIRO00625 290 aa22.78■■□□□ 1.24
SMARCD2-201ENST00000225742 HGSO14964 777 aaPredicted RBP22.78■■□□□ 1.24
SMARCD2-201ENST00000225742 DNAJC6O75061 913 aa22.78■■□□□ 1.24
SMARCD2-201ENST00000225742 KRT38O76015 456 aa22.78■■□□□ 1.24
SMARCD2-201ENST00000225742 APRTP07741 180 aa22.78■■□□□ 1.24
SMARCD2-201ENST00000225742 T-ENOLP0DO92 83 aa22.78■■□□□ 1.24
SMARCD2-201ENST00000225742 EPHX2P34913 555 aa22.78■■□□□ 1.24
SMARCD2-201ENST00000225742 SERPINB9P50453 376 aa22.78■■□□□ 1.24
SMARCD2-201ENST00000225742 SARNPP82979 210 aaKnown RBP22.78■■□□□ 1.24
SMARCD2-201ENST00000225742 MTM1Q13496 603 aa22.78■■□□□ 1.24
SMARCD2-201ENST00000225742 PRKD1Q15139 912 aaPredicted RBP22.78■■□□□ 1.24
SMARCD2-201ENST00000225742 PPP6R3Q5H9R7 873 aaPredicted RBP22.78■■□□□ 1.24
SMARCD2-201ENST00000225742 PPM1NQ8N819 430 aa22.78■■□□□ 1.24
SMARCD2-201ENST00000225742 TBC1D31Q96DN5 1066 aa22.78■■□□□ 1.24
SMARCD2-201ENST00000225742 EBNA1BP2Q99848 306 aaKnown RBP22.78■■□□□ 1.24
SMARCD2-201ENST00000225742 DHX35Q9H5Z1 703 aaKnown RBP22.78■■□□□ 1.24
SMARCD2-201ENST00000225742 AP4E1Q9UPM8 1137 aa22.78■■□□□ 1.24
SMARCD2-201ENST00000225742 EPB41L3Q9Y2J2 1087 aaPredicted RBP22.78■■□□□ 1.24
SMARCD2-201ENST00000225742 SLC15A5A6NIM6 579 aa22.77■■□□□ 1.24
SMARCD2-201ENST00000225742 PIAS1O75925 651 aa22.77■■□□□ 1.24
SMARCD2-201ENST00000225742 TARSP26639 723 aaKnown RBP22.77■■□□□ 1.24
SMARCD2-201ENST00000225742 SERPINB4P48594 390 aa22.77■■□□□ 1.24
SMARCD2-201ENST00000225742 CDK16Q00536 496 aa22.77■■□□□ 1.24
SMARCD2-201ENST00000225742 SEMA5AQ13591 1074 aa22.77■■□□□ 1.24
SMARCD2-201ENST00000225742 EFHC1Q5JVL4 640 aa22.77■■□□□ 1.24
SMARCD2-201ENST00000225742 FBXO47Q5MNV8 452 aa22.77■■□□□ 1.24
SMARCD2-201ENST00000225742 DPY19L2Q6NUT2 758 aa22.77■■□□□ 1.24
SMARCD2-201ENST00000225742 DPP9Q86TI2 863 aa22.77■■□□□ 1.24
SMARCD2-201ENST00000225742 PRPF39Q86UA1 669 aaKnown RBP22.77■■□□□ 1.24
SMARCD2-201ENST00000225742 CTAGE3PQ8IX95 158 aa22.77■■□□□ 1.24
SMARCD2-201ENST00000225742 GIMAP7Q8NHV1 300 aa22.77■■□□□ 1.24
SMARCD2-201ENST00000225742 GSDMBQ8TAX9 411 aa22.77■■□□□ 1.24
SMARCD2-201ENST00000225742 CCDC110Q8TBZ0 833 aa22.77■■□□□ 1.24
SMARCD2-201ENST00000225742 EIF2AQ9BY44 585 aaKnown RBP22.77■■□□□ 1.24
SMARCD2-201ENST00000225742 SNX25Q9H3E2 840 aa22.77■■□□□ 1.24
SMARCD2-201ENST00000225742 TLE6Q9H808 572 aa22.77■■□□□ 1.24
SMARCD2-201ENST00000225742 SETD4Q9NVD3 440 aa22.77■■□□□ 1.24
SMARCD2-201ENST00000225742 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP22.77■■□□□ 1.24
SMARCD2-201ENST00000225742 HAO1Q9UJM8 370 aa22.77■■□□□ 1.24
SMARCD2-201ENST00000225742 NRCAMQ92823 1304 aa22.76■■□□□ 1.23
SMARCD2-201ENST00000225742 ZNF189O75820 626 aaPredicted RBP22.76■■□□□ 1.23
SMARCD2-201ENST00000225742 DARSP14868 501 aaKnown RBP22.76■■□□□ 1.23
SMARCD2-201ENST00000225742 PTPN4P29074 926 aa22.76■■□□□ 1.23
SMARCD2-201ENST00000225742 GNL1P36915 607 aaPredicted RBP22.76■■□□□ 1.23
SMARCD2-201ENST00000225742 FDFT1P37268 417 aa22.76■■□□□ 1.23
SMARCD2-201ENST00000225742 GRB14Q14449 540 aa22.76■■□□□ 1.23
SMARCD2-201ENST00000225742 TAF1BQ53T94 588 aaPredicted RBP22.76■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms