RNA–Protein interactions for RNA: ENST00000221232.9

CNOT3-201, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 2,852 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-201ENST00000221232 ITGA11Q9UKX5 1188 aa15.18■□□□□ 0.02
CNOT3-201ENST00000221232 TTLL3Q9Y4R7 772 aa15.18■□□□□ 0.02
CNOT3-201ENST00000221232 A0A1B0GUA9 196 aa15.17■□□□□ 0.02
CNOT3-201ENST00000221232 SPDYE5A6NIY4 337 aa15.17■□□□□ 0.02
CNOT3-201ENST00000221232 CXCL11O14625 94 aa15.17■□□□□ 0.02
CNOT3-201ENST00000221232 TM9SF1O15321 606 aa15.17■□□□□ 0.02
CNOT3-201ENST00000221232 CSH1P0DML2 217 aa15.17■□□□□ 0.02
CNOT3-201ENST00000221232 CSH2P0DML3 217 aa15.17■□□□□ 0.02
CNOT3-201ENST00000221232 MYL2P10916 166 aa15.17■□□□□ 0.02
CNOT3-201ENST00000221232 GMPRP36959 345 aa15.17■□□□□ 0.02
CNOT3-201ENST00000221232 SERPINB4P48594 390 aa15.17■□□□□ 0.02
CNOT3-201ENST00000221232 ACAP1Q15027 740 aa15.17■□□□□ 0.02
CNOT3-201ENST00000221232 GRIK4Q16099 956 aa15.17■□□□□ 0.02
CNOT3-201ENST00000221232 SOWAHAQ2M3V2 549 aa15.17■□□□□ 0.02
CNOT3-201ENST00000221232 KCNT2Q6UVM3 1135 aa15.17■□□□□ 0.02
CNOT3-201ENST00000221232 DENND5BQ6ZUT9 1274 aa15.17■□□□□ 0.02
CNOT3-201ENST00000221232 CATSPER4Q7RTX7 472 aa15.17■□□□□ 0.02
CNOT3-201ENST00000221232 ALYREFQ86V81 257 aaKnown RBP15.17■□□□□ 0.02
CNOT3-201ENST00000221232 SLC26A11Q86WA9 606 aa15.17■□□□□ 0.02
CNOT3-201ENST00000221232 FAM131BQ86XD5 332 aa15.17■□□□□ 0.02
CNOT3-201ENST00000221232 CCDC185Q8N715 623 aa15.17■□□□□ 0.02
CNOT3-201ENST00000221232 FAM149B1Q96BN6 582 aa15.17■□□□□ 0.02
CNOT3-201ENST00000221232 C16orf70Q9BSU1 422 aa15.17■□□□□ 0.02
CNOT3-201ENST00000221232 VPS11Q9H270 941 aa15.17■□□□□ 0.02
CNOT3-201ENST00000221232 SEPT10Q9P0V9 454 aa15.17■□□□□ 0.02
CNOT3-201ENST00000221232 GJD2Q9UKL4 321 aa15.17■□□□□ 0.02
CNOT3-201ENST00000221232 A6NJR5 290 aa15.17■□□□□ 0.02
CNOT3-201ENST00000221232 C2CD2LO14523 706 aa15.17■□□□□ 0.02
CNOT3-201ENST00000221232 GJA5P36382 358 aa15.17■□□□□ 0.02
CNOT3-201ENST00000221232 UNC5AQ6ZN44 842 aa15.17■□□□□ 0.02
CNOT3-201ENST00000221232 APOPT1Q96IL0 206 aa15.17■□□□□ 0.02
CNOT3-201ENST00000221232 RSRC1Q96IZ7 334 aaKnown RBP15.17■□□□□ 0.02
CNOT3-201ENST00000221232 ZNF570Q96NI8 536 aa15.17■□□□□ 0.02
CNOT3-201ENST00000221232 NUDCD1Q96RS6 583 aa15.17■□□□□ 0.02
CNOT3-201ENST00000221232 LGMNQ99538 433 aa15.17■□□□□ 0.02
CNOT3-201ENST00000221232 NXF3Q9H4D5 531 aaKnown RBP15.17■□□□□ 0.02
CNOT3-201ENST00000221232 NRDE2Q9H7Z3 1164 aa15.17■□□□□ 0.02
CNOT3-201ENST00000221232 POPDC2Q9HBU9 364 aa15.17■□□□□ 0.02
CNOT3-201ENST00000221232 ASB14A6NK59 587 aa15.16■□□□□ 0.02
CNOT3-201ENST00000221232 CHADO15335 359 aa15.16■□□□□ 0.02
CNOT3-201ENST00000221232 UPP2O95045 317 aa15.16■□□□□ 0.02
CNOT3-201ENST00000221232 TMPRSS15P98073 1019 aa15.16■□□□□ 0.02
CNOT3-201ENST00000221232 INCA1Q0VD86 236 aa15.16■□□□□ 0.02
CNOT3-201ENST00000221232 PRAMEF19Q5SWL8 479 aa15.16■□□□□ 0.02
CNOT3-201ENST00000221232 MARCH8Q5T0T0 291 aa15.16■□□□□ 0.02
CNOT3-201ENST00000221232 TLDC1Q6P9B6 456 aa15.16■□□□□ 0.02
CNOT3-201ENST00000221232 MAMDC4Q6UXC1 1216 aa15.16■□□□□ 0.02
CNOT3-201ENST00000221232 SLC35F5Q8WV83 523 aa15.16■□□□□ 0.02
CNOT3-201ENST00000221232 MIPEPQ99797 713 aa15.16■□□□□ 0.02
CNOT3-201ENST00000221232 TRIM6Q9C030 488 aaPredicted RBP15.16■□□□□ 0.02
CNOT3-201ENST00000221232 MAF1Q9H063 256 aa15.16■□□□□ 0.02
CNOT3-201ENST00000221232 DENND2DQ9H6A0 471 aaPredicted RBP15.16■□□□□ 0.02
CNOT3-201ENST00000221232 PPCSQ9HAB8 311 aa15.16■□□□□ 0.02
CNOT3-201ENST00000221232 KCNK13Q9HB14 408 aa15.16■□□□□ 0.02
CNOT3-201ENST00000221232 CACNG4Q9UBN1 327 aa15.16■□□□□ 0.02
CNOT3-201ENST00000221232 GOT1P17174 413 aa15.16■□□□□ 0.02
CNOT3-201ENST00000221232 SKIV2L2P42285 1042 aaKnown RBP15.16■□□□□ 0.02
CNOT3-201ENST00000221232 ETV4P43268 484 aa15.16■□□□□ 0.02
CNOT3-201ENST00000221232 SESN2P58004 480 aaPredicted RBP15.16■□□□□ 0.02
CNOT3-201ENST00000221232 PITX1P78337 314 aaPredicted RBP15.16■□□□□ 0.02
CNOT3-201ENST00000221232 RASA2Q15283 850 aa15.16■□□□□ 0.02
CNOT3-201ENST00000221232 SLC45A4Q5BKX6 768 aa15.16■□□□□ 0.02
CNOT3-201ENST00000221232 TTC39BQ5VTQ0 682 aaPredicted RBP15.16■□□□□ 0.02
CNOT3-201ENST00000221232 ANKRD20A3Q5VUR7 823 aa15.16■□□□□ 0.02
CNOT3-201ENST00000221232 C16orf46Q6P387 395 aa15.16■□□□□ 0.02
CNOT3-201ENST00000221232 CES3Q6UWW8 571 aa15.16■□□□□ 0.02
CNOT3-201ENST00000221232 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.16■□□□□ 0.02
CNOT3-201ENST00000221232 MROH8Q9H579 483 aa15.16■□□□□ 0.02
CNOT3-201ENST00000221232 SIP14410 1827 aa15.16■□□□□ 0.02
CNOT3-201ENST00000221232 SLC15A5A6NIM6 579 aa15.15■□□□□ 0.02
CNOT3-201ENST00000221232 SKAP2O75563 359 aaPredicted RBP15.15■□□□□ 0.02
CNOT3-201ENST00000221232 HAUS5O94927 633 aa15.15■□□□□ 0.02
CNOT3-201ENST00000221232 IGFBP6P24592 240 aaPredicted RBP15.15■□□□□ 0.02
CNOT3-201ENST00000221232 NEK3P51956 506 aa15.15■□□□□ 0.02
CNOT3-201ENST00000221232 OLIG2Q13516 323 aa15.15■□□□□ 0.02
CNOT3-201ENST00000221232 PDK2Q15119 407 aa15.15■□□□□ 0.02
CNOT3-201ENST00000221232 CHI3L2Q15782 390 aa15.15■□□□□ 0.02
CNOT3-201ENST00000221232 FAM187BQ17R55 369 aa15.15■□□□□ 0.02
CNOT3-201ENST00000221232 CES4AQ5XG92 561 aa15.15■□□□□ 0.02
CNOT3-201ENST00000221232 NDUFAF2Q8N183 169 aa15.15■□□□□ 0.02
CNOT3-201ENST00000221232 ALKBH8Q96BT7 664 aaKnown RBP15.15■□□□□ 0.02
CNOT3-201ENST00000221232 PAPPA2Q9BXP8 1791 aa15.15■□□□□ 0.02
CNOT3-201ENST00000221232 VRTNQ9H8Y1 702 aa15.15■□□□□ 0.02
CNOT3-201ENST00000221232 CLDN5O00501 218 aa15.15■□□□□ 0.02
CNOT3-201ENST00000221232 ATP5HO75947 161 aa15.15■□□□□ 0.02
CNOT3-201ENST00000221232 SNRPAP09012 282 aaKnown RBP15.15■□□□□ 0.02
CNOT3-201ENST00000221232 HOXA11P31270 313 aaPredicted RBP15.15■□□□□ 0.02
CNOT3-201ENST00000221232 L1CAMP32004 1257 aa15.15■□□□□ 0.02
CNOT3-201ENST00000221232 ANKRD20A2Q5SQ80 823 aa15.15■□□□□ 0.02
CNOT3-201ENST00000221232 ANKRD20A1Q5TYW2 823 aa15.15■□□□□ 0.02
CNOT3-201ENST00000221232 SH2D5Q6ZV89 423 aa15.15■□□□□ 0.02
CNOT3-201ENST00000221232 APBB1IPQ7Z5R6 666 aaPredicted RBP15.15■□□□□ 0.02
CNOT3-201ENST00000221232 DPP9Q86TI2 863 aa15.15■□□□□ 0.02
CNOT3-201ENST00000221232 ARID3BQ8IVW6 561 aaPredicted RBP15.15■□□□□ 0.02
CNOT3-201ENST00000221232 TP53INP2Q8IXH6 220 aa15.15■□□□□ 0.02
CNOT3-201ENST00000221232 VPS52Q8N1B4 723 aa15.15■□□□□ 0.02
CNOT3-201ENST00000221232 LENG1Q96BZ8 264 aaPredicted RBP15.15■□□□□ 0.02
CNOT3-201ENST00000221232 RNF39Q9H2S5 420 aa15.15■□□□□ 0.02
CNOT3-201ENST00000221232 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.15■□□□□ 0.02
CNOT3-201ENST00000221232 AP4E1Q9UPM8 1137 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms