RNA–Protein interactions for RNA: ENST00000219281.7

USB1-201, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USB1, Length 2,282 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-201ENST00000219281 HSDL1Q3SXM5 330 aa17.92■□□□□ 0.46
USB1-201ENST00000219281 MAP1SQ66K74 1059 aaPredicted RBP17.92■□□□□ 0.46
USB1-201ENST00000219281 LRRC74BQ6ZQY2 392 aa17.92■□□□□ 0.46
USB1-201ENST00000219281 ARID3BQ8IVW6 561 aaPredicted RBP17.92■□□□□ 0.46
USB1-201ENST00000219281 ACAP3Q96P50 834 aa17.92■□□□□ 0.46
USB1-201ENST00000219281 MMADHCQ9H3L0 296 aaPredicted RBP17.92■□□□□ 0.46
USB1-201ENST00000219281 ETNK2Q9NVF9 386 aa17.92■□□□□ 0.46
USB1-201ENST00000219281 ZNF180Q9UJW8 692 aa17.92■□□□□ 0.46
USB1-201ENST00000219281 VDRP11473 427 aa17.92■□□□□ 0.46
USB1-201ENST00000219281 CYP3A5P20815 502 aa17.92■□□□□ 0.46
USB1-201ENST00000219281 TTLL12Q14166 644 aaPredicted RBP17.92■□□□□ 0.46
USB1-201ENST00000219281 LGSNQ5TDP6 509 aa17.92■□□□□ 0.46
USB1-201ENST00000219281 ATG16L1Q676U5 607 aa17.92■□□□□ 0.46
USB1-201ENST00000219281 TMEM154Q6P9G4 183 aa17.92■□□□□ 0.46
USB1-201ENST00000219281 TREML1Q86YW5 311 aa17.92■□□□□ 0.46
USB1-201ENST00000219281 TRIM42Q8IWZ5 723 aa17.92■□□□□ 0.46
USB1-201ENST00000219281 PQLC3Q8N755 202 aa17.92■□□□□ 0.46
USB1-201ENST00000219281 CFAP61Q8NHU2 1237 aa17.92■□□□□ 0.46
USB1-201ENST00000219281 FBXO27Q8NI29 283 aa17.92■□□□□ 0.46
USB1-201ENST00000219281 OPTNQ96CV9 577 aa17.92■□□□□ 0.46
USB1-201ENST00000219281 C7orf26Q96N11 449 aa17.92■□□□□ 0.46
USB1-201ENST00000219281 SYT15Q9BQS2 421 aa17.92■□□□□ 0.46
USB1-201ENST00000219281 TRIM56Q9BRZ2 755 aaKnown RBP17.92■□□□□ 0.46
USB1-201ENST00000219281 PPARGC1AQ9UBK2 798 aaKnown RBP17.92■□□□□ 0.46
USB1-201ENST00000219281 MARCOQ9UEW3 520 aaPredicted RBP17.92■□□□□ 0.46
USB1-201ENST00000219281 PPME1Q9Y570 386 aa17.92■□□□□ 0.46
USB1-201ENST00000219281 H3BRJ5 948 aa17.91■□□□□ 0.46
USB1-201ENST00000219281 TRDMT1O14717 391 aaKnown RBP17.91■□□□□ 0.46
USB1-201ENST00000219281 APOL1O14791 398 aa17.91■□□□□ 0.46
USB1-201ENST00000219281 GAS2O43903 313 aaKnown RBP17.91■□□□□ 0.46
USB1-201ENST00000219281 IQCF3P0C7M6 154 aa17.91■□□□□ 0.46
USB1-201ENST00000219281 CSH1P0DML2 217 aa17.91■□□□□ 0.46
USB1-201ENST00000219281 CSH2P0DML3 217 aa17.91■□□□□ 0.46
USB1-201ENST00000219281 PRKCHP24723 683 aa17.91■□□□□ 0.46
USB1-201ENST00000219281 BCAR1P56945 870 aa17.91■□□□□ 0.46
USB1-201ENST00000219281 FAM91A1Q658Y4 838 aa17.91■□□□□ 0.46
USB1-201ENST00000219281 NUDCD3Q8IVD9 361 aa17.91■□□□□ 0.46
USB1-201ENST00000219281 MAP7D3Q8IWC1 876 aa17.91■□□□□ 0.46
USB1-201ENST00000219281 CCDC110Q8TBZ0 833 aa17.91■□□□□ 0.46
USB1-201ENST00000219281 UCMAQ8WVF2 138 aa17.91■□□□□ 0.46
USB1-201ENST00000219281 FAM136AQ96C01 138 aa17.91■□□□□ 0.46
USB1-201ENST00000219281 FAM161BQ96MY7 647 aa17.91■□□□□ 0.46
USB1-201ENST00000219281 GPR20Q99678 358 aa17.91■□□□□ 0.46
USB1-201ENST00000219281 KLC2Q9H0B6 622 aa17.91■□□□□ 0.46
USB1-201ENST00000219281 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.91■□□□□ 0.46
USB1-201ENST00000219281 DNAJC25-GNG10A0A024R161 153 aa17.91■□□□□ 0.46
USB1-201ENST00000219281 CAPN14A8MX76 684 aa17.91■□□□□ 0.46
USB1-201ENST00000219281 CSDE1O75534 798 aaKnown RBP17.91■□□□□ 0.46
USB1-201ENST00000219281 SLC25A27O95847 323 aa17.91■□□□□ 0.46
USB1-201ENST00000219281 APOEP02649 317 aa17.91■□□□□ 0.46
USB1-201ENST00000219281 STAG3L1P0CL83 205 aa17.91■□□□□ 0.46
USB1-201ENST00000219281 AMPD1P23109 780 aa17.91■□□□□ 0.46
USB1-201ENST00000219281 CLCN3P51790 818 aa17.91■□□□□ 0.46
USB1-201ENST00000219281 MBTD1Q05BQ5 628 aa17.91■□□□□ 0.46
USB1-201ENST00000219281 PPIL2Q13356 520 aa17.91■□□□□ 0.46
USB1-201ENST00000219281 CCDC14Q49A88 953 aa17.91■□□□□ 0.46
USB1-201ENST00000219281 UNC5AQ6ZN44 842 aa17.91■□□□□ 0.46
USB1-201ENST00000219281 SMC1BQ8NDV3 1235 aa17.91■□□□□ 0.46
USB1-201ENST00000219281 CXorf38Q8TB03 319 aa17.91■□□□□ 0.46
USB1-201ENST00000219281 RTP4Q96DX8 246 aa17.91■□□□□ 0.46
USB1-201ENST00000219281 FRMD8Q9BZ67 464 aaPredicted RBP17.91■□□□□ 0.46
USB1-201ENST00000219281 PCMTD2Q9NV79 361 aa17.91■□□□□ 0.46
USB1-201ENST00000219281 STX18Q9P2W9 335 aaKnown RBP17.91■□□□□ 0.46
USB1-201ENST00000219281 TNFSF13BQ9Y275 285 aa17.91■□□□□ 0.46
USB1-201ENST00000219281 SLC15A5A6NIM6 579 aa17.9■□□□□ 0.46
USB1-201ENST00000219281 NOP56O00567 594 aaKnown RBP17.9■□□□□ 0.46
USB1-201ENST00000219281 GJA5P36382 358 aa17.9■□□□□ 0.46
USB1-201ENST00000219281 CCNFP41002 786 aa17.9■□□□□ 0.46
USB1-201ENST00000219281 RGS7P49802 495 aa17.9■□□□□ 0.46
USB1-201ENST00000219281 OCRLQ01968 901 aa17.9■□□□□ 0.46
USB1-201ENST00000219281 RCN2Q14257 317 aa17.9■□□□□ 0.46
USB1-201ENST00000219281 PDK2Q15119 407 aa17.9■□□□□ 0.46
USB1-201ENST00000219281 CA9Q16790 459 aa17.9■□□□□ 0.46
USB1-201ENST00000219281 SMYD5Q6GMV2 418 aa17.9■□□□□ 0.46
USB1-201ENST00000219281 EP400NLQ6ZTU2 488 aa17.9■□□□□ 0.46
USB1-201ENST00000219281 ARHGAP24Q8N264 748 aa17.9■□□□□ 0.46
USB1-201ENST00000219281 PCDH19Q8TAB3 1148 aa17.9■□□□□ 0.46
USB1-201ENST00000219281 NGRNQ9NPE2 291 aaKnown RBP17.9■□□□□ 0.46
USB1-201ENST00000219281 SIRPGQ9P1W8 387 aa17.9■□□□□ 0.46
USB1-201ENST00000219281 MAD1L1Q9Y6D9 718 aa17.9■□□□□ 0.46
USB1-201ENST00000219281 BCLAF3A2AJT9 711 aaKnown RBP17.89■□□□□ 0.46
USB1-201ENST00000219281 ENO4A6NNW6 628 aa17.89■□□□□ 0.46
USB1-201ENST00000219281 TGM2P21980 687 aa17.89■□□□□ 0.46
USB1-201ENST00000219281 EPHX2P34913 555 aa17.89■□□□□ 0.46
USB1-201ENST00000219281 NDST1P52848 882 aa17.89■□□□□ 0.46
USB1-201ENST00000219281 AQP5P55064 265 aa17.89■□□□□ 0.46
USB1-201ENST00000219281 MXRA7P84157 204 aa17.89■□□□□ 0.46
USB1-201ENST00000219281 CBLBQ13191 982 aa17.89■□□□□ 0.46
USB1-201ENST00000219281 TEX44Q53QW1 395 aa17.89■□□□□ 0.46
USB1-201ENST00000219281 MROH9Q5TGP6 573 aa17.89■□□□□ 0.46
USB1-201ENST00000219281 EFCAB12Q6NXP0 572 aa17.89■□□□□ 0.46
USB1-201ENST00000219281 TRMT10BQ6PF06 316 aaKnown RBP17.89■□□□□ 0.46
USB1-201ENST00000219281 USP50Q70EL3 339 aaPredicted RBP17.89■□□□□ 0.46
USB1-201ENST00000219281 TMPRSS6Q8IU80 811 aa17.89■□□□□ 0.46
USB1-201ENST00000219281 NDUFAF2Q8N183 169 aa17.89■□□□□ 0.46
USB1-201ENST00000219281 CYP3A43Q9HB55 503 aa17.89■□□□□ 0.46
USB1-201ENST00000219281 PCDH18Q9HCL0 1135 aa17.89■□□□□ 0.46
USB1-201ENST00000219281 TSPAN16Q9UKR8 245 aa17.89■□□□□ 0.46
USB1-201ENST00000219281 WASF2Q9Y6W5 498 aa17.89■□□□□ 0.46
USB1-201ENST00000219281 KRT38O76015 456 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 104.2 ms