RNA–Protein interactions for RNA: ENST00000217315.9

TM9SF4-201, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 2 BASIC

Gene TM9SF4, Length 4,032 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-201ENST00000217315 TKTL1P51854 596 aa12.77□□□□□ -0.36
TM9SF4-201ENST00000217315 YWHAZP63104 245 aaKnown RBP12.77□□□□□ -0.36
TM9SF4-201ENST00000217315 FSCBQ5H9T9 825 aa12.77□□□□□ -0.36
TM9SF4-201ENST00000217315 RNASEH2BQ5TBB1 312 aaKnown RBP12.77□□□□□ -0.36
TM9SF4-201ENST00000217315 VSTM1Q6UX27 236 aa12.77□□□□□ -0.36
TM9SF4-201ENST00000217315 HTR3CQ8WXA8 447 aa12.77□□□□□ -0.36
TM9SF4-201ENST00000217315 VPS39Q96JC1 886 aa12.77□□□□□ -0.36
TM9SF4-201ENST00000217315 MINDY3Q9H8M7 445 aa12.77□□□□□ -0.36
TM9SF4-201ENST00000217315 ETNK2Q9NVF9 386 aa12.77□□□□□ -0.36
TM9SF4-201ENST00000217315 HMGXB4Q9UGU5 601 aa12.77□□□□□ -0.36
TM9SF4-201ENST00000217315 PCDHGC3Q9UN70 934 aa12.77□□□□□ -0.36
TM9SF4-201ENST00000217315 MRPL42Q9Y6G3 142 aaKnown RBP12.77□□□□□ -0.36
TM9SF4-201ENST00000217315 ECM29Q5VYK3 1845 aa12.77□□□□□ -0.37
TM9SF4-201ENST00000217315 SMIM24O75264 130 aa12.77□□□□□ -0.37
TM9SF4-201ENST00000217315 PPIL2Q13356 520 aa12.77□□□□□ -0.37
TM9SF4-201ENST00000217315 USP10Q14694 798 aaKnown RBP12.77□□□□□ -0.37
TM9SF4-201ENST00000217315 RASA2Q15283 850 aa12.77□□□□□ -0.37
TM9SF4-201ENST00000217315 FNBP1LQ5T0N5 605 aa12.77□□□□□ -0.37
TM9SF4-201ENST00000217315 SH3PXD2AQ5TCZ1 1133 aa12.77□□□□□ -0.37
TM9SF4-201ENST00000217315 DPY19L2P1Q6NXN4 242 aa12.77□□□□□ -0.37
TM9SF4-201ENST00000217315 RGS9BPQ6ZS82 235 aa12.77□□□□□ -0.37
TM9SF4-201ENST00000217315 IPMKQ8NFU5 416 aa12.77□□□□□ -0.37
TM9SF4-201ENST00000217315 EDEM1Q92611 657 aa12.77□□□□□ -0.37
TM9SF4-201ENST00000217315 MTBPQ96DY7 904 aa12.77□□□□□ -0.37
TM9SF4-201ENST00000217315 RMDN2Q96LZ7 410 aa12.77□□□□□ -0.37
TM9SF4-201ENST00000217315 KRT82Q9NSB4 513 aa12.77□□□□□ -0.37
TM9SF4-201ENST00000217315 SLC39A10Q9ULF5 831 aa12.77□□□□□ -0.37
TM9SF4-201ENST00000217315 STARD13Q9Y3M8 1113 aa12.77□□□□□ -0.37
TM9SF4-201ENST00000217315 WDR27A2RRH5 827 aa12.77□□□□□ -0.37
TM9SF4-201ENST00000217315 STRNO43815 780 aa12.77□□□□□ -0.37
TM9SF4-201ENST00000217315 GTF2A2P52657 109 aa12.77□□□□□ -0.37
TM9SF4-201ENST00000217315 CUL3Q13618 768 aa12.77□□□□□ -0.37
TM9SF4-201ENST00000217315 ACVR2BQ13705 512 aa12.77□□□□□ -0.37
TM9SF4-201ENST00000217315 UBAP2Q5T6F2 1119 aaKnown RBP12.77□□□□□ -0.37
TM9SF4-201ENST00000217315 FITM2Q8N6M3 262 aa12.77□□□□□ -0.37
TM9SF4-201ENST00000217315 AGAP11Q8TF27 550 aa12.77□□□□□ -0.37
TM9SF4-201ENST00000217315 SLCO2A1Q92959 643 aa12.77□□□□□ -0.37
TM9SF4-201ENST00000217315 MRPL45Q9BRJ2 306 aaKnown RBP12.77□□□□□ -0.37
TM9SF4-201ENST00000217315 HERPUD2Q9BSE4 406 aa12.77□□□□□ -0.37
TM9SF4-201ENST00000217315 WDCPQ9H6R7 721 aa12.77□□□□□ -0.37
TM9SF4-201ENST00000217315 CPSF2Q9P2I0 782 aaKnown RBP12.77□□□□□ -0.37
TM9SF4-201ENST00000217315 SLC17A7Q9P2U7 560 aa12.77□□□□□ -0.37
TM9SF4-201ENST00000217315 C2CD2Q9Y426 696 aa12.77□□□□□ -0.37
TM9SF4-201ENST00000217315 UNC5CO95185 931 aa12.76□□□□□ -0.37
TM9SF4-201ENST00000217315 APOEP02649 317 aa12.76□□□□□ -0.37
TM9SF4-201ENST00000217315 IL1R2P27930 398 aa12.76□□□□□ -0.37
TM9SF4-201ENST00000217315 PCSK1P29120 753 aa12.76□□□□□ -0.37
TM9SF4-201ENST00000217315 GRIK1P39086 918 aa12.76□□□□□ -0.37
TM9SF4-201ENST00000217315 NUMBP49757 651 aa12.76□□□□□ -0.37
TM9SF4-201ENST00000217315 NCALDP61601 193 aa12.76□□□□□ -0.37
TM9SF4-201ENST00000217315 MTHFD1LQ6UB35 978 aa12.76□□□□□ -0.37
TM9SF4-201ENST00000217315 HASPINQ8TF76 798 aa12.76□□□□□ -0.37
TM9SF4-201ENST00000217315 C18orf25Q96B23 403 aaPredicted RBP12.76□□□□□ -0.37
TM9SF4-201ENST00000217315 SPDL1Q96EA4 605 aa12.76□□□□□ -0.37
TM9SF4-201ENST00000217315 ZNF317Q96PQ6 595 aaPredicted RBP12.76□□□□□ -0.37
TM9SF4-201ENST00000217315 TASP1Q9H6P5 420 aa12.76□□□□□ -0.37
TM9SF4-201ENST00000217315 CNTNAP2Q9UHC6 1331 aa12.76□□□□□ -0.37
TM9SF4-201ENST00000217315 ARHGEF37A1IGU5 675 aa12.76□□□□□ -0.37
TM9SF4-201ENST00000217315 KRT16P08779 473 aa12.76□□□□□ -0.37
TM9SF4-201ENST00000217315 PAMP19021 973 aa12.76□□□□□ -0.37
TM9SF4-201ENST00000217315 MGAT1P26572 445 aa12.76□□□□□ -0.37
TM9SF4-201ENST00000217315 ASPAP45381 313 aa12.76□□□□□ -0.37
TM9SF4-201ENST00000217315 HIC1Q14526 733 aa12.76□□□□□ -0.37
TM9SF4-201ENST00000217315 SLC10A6Q3KNW5 377 aa12.76□□□□□ -0.37
TM9SF4-201ENST00000217315 RABGAP1LQ5R372 815 aa12.76□□□□□ -0.37
TM9SF4-201ENST00000217315 TWNKQ96RR1 684 aa12.76□□□□□ -0.37
TM9SF4-201ENST00000217315 FAM96AQ9H5X1 160 aa12.76□□□□□ -0.37
TM9SF4-201ENST00000217315 NRDE2Q9H7Z3 1164 aa12.76□□□□□ -0.37
TM9SF4-201ENST00000217315 NDE1Q9NXR1 346 aa12.76□□□□□ -0.37
TM9SF4-201ENST00000217315 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.76□□□□□ -0.37
TM9SF4-201ENST00000217315 LOC102724159A0A0B4J2E5 919 aa12.76□□□□□ -0.37
TM9SF4-201ENST00000217315 FZD9O00144 591 aa12.76□□□□□ -0.37
TM9SF4-201ENST00000217315 RNF103O00237 685 aa12.76□□□□□ -0.37
TM9SF4-201ENST00000217315 CELF2O95319 508 aaKnown RBP12.76□□□□□ -0.37
TM9SF4-201ENST00000217315 JCHAINP01591 159 aa12.76□□□□□ -0.37
TM9SF4-201ENST00000217315 YY1P25490 414 aa12.76□□□□□ -0.37
TM9SF4-201ENST00000217315 PTPN4P29074 926 aa12.76□□□□□ -0.37
TM9SF4-201ENST00000217315 KPNA2P52292 529 aaKnown RBP12.76□□□□□ -0.37
TM9SF4-201ENST00000217315 MBTD1Q05BQ5 628 aa12.76□□□□□ -0.37
TM9SF4-201ENST00000217315 ENPEPQ07075 957 aa12.76□□□□□ -0.37
TM9SF4-201ENST00000217315 PWP2Q15269 919 aaKnown RBP12.76□□□□□ -0.37
TM9SF4-201ENST00000217315 RCN1Q15293 331 aa12.76□□□□□ -0.37
TM9SF4-201ENST00000217315 PCSK7Q16549 785 aa12.76□□□□□ -0.37
TM9SF4-201ENST00000217315 C16orf46Q6P387 395 aa12.76□□□□□ -0.37
TM9SF4-201ENST00000217315 OTOAQ7RTW8 1153 aa12.76□□□□□ -0.37
TM9SF4-201ENST00000217315 ZNF410Q86VK4 478 aa12.76□□□□□ -0.37
TM9SF4-201ENST00000217315 NT5DC4Q86YG4 428 aa12.76□□□□□ -0.37
TM9SF4-201ENST00000217315 FNIP1Q8TF40 1166 aa12.76□□□□□ -0.37
TM9SF4-201ENST00000217315 KATNAL1Q9BW62 490 aa12.76□□□□□ -0.37
TM9SF4-201ENST00000217315 FZD8Q9H461 694 aa12.76□□□□□ -0.37
TM9SF4-201ENST00000217315 SLC38A7Q9NVC3 462 aa12.76□□□□□ -0.37
TM9SF4-201ENST00000217315 ATXN2Q99700 1313 aaKnown RBP12.75□□□□□ -0.37
TM9SF4-201ENST00000217315 FCHO1O14526 889 aa12.75□□□□□ -0.37
TM9SF4-201ENST00000217315 MYCP01106 439 aaPredicted RBP12.75□□□□□ -0.37
TM9SF4-201ENST00000217315 PMLP29590 882 aa12.75□□□□□ -0.37
TM9SF4-201ENST00000217315 HUNKP57058 714 aa12.75□□□□□ -0.37
TM9SF4-201ENST00000217315 XRCC4Q13426 336 aa12.75□□□□□ -0.37
TM9SF4-201ENST00000217315 ACAD11Q709F0 780 aa12.75□□□□□ -0.37
TM9SF4-201ENST00000217315 PIGWQ7Z7B1 504 aa12.75□□□□□ -0.37
TM9SF4-201ENST00000217315 NXF3Q9H4D5 531 aaKnown RBP12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms