RNA–Protein interactions for RNA: ENST00000216727.8

PABPN1-201, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PABPN1, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-201ENST00000216727 GMNCA6NCL1 334 aa30.86■■■□□ 2.53
PABPN1-201ENST00000216727 MOXD2PA6NHM9 499 aa30.86■■■□□ 2.53
PABPN1-201ENST00000216727 CHN1P15882 459 aa30.86■■■□□ 2.53
PABPN1-201ENST00000216727 SEC24CP53992 1094 aa30.86■■■□□ 2.53
PABPN1-201ENST00000216727 XRCC4Q13426 336 aa30.86■■■□□ 2.53
PABPN1-201ENST00000216727 TUSC3Q13454 348 aa30.86■■■□□ 2.53
PABPN1-201ENST00000216727 RAB41Q5JT25 222 aa30.86■■■□□ 2.53
PABPN1-201ENST00000216727 OTUD1Q5VV17 481 aaPredicted RBP30.86■■■□□ 2.53
PABPN1-201ENST00000216727 ZNF598Q86UK7 904 aaKnown RBP30.86■■■□□ 2.53
PABPN1-201ENST00000216727 CSPG4P5Q96PW8 444 aa30.86■■■□□ 2.53
PABPN1-201ENST00000216727 CCT8L2Q96SF2 557 aa30.86■■■□□ 2.53
PABPN1-201ENST00000216727 CNGB3Q9NQW8 809 aa30.86■■■□□ 2.53
PABPN1-201ENST00000216727 RSPH14Q9UHP6 348 aa30.86■■■□□ 2.53
PABPN1-201ENST00000216727 DYNC1LI1Q9Y6G9 523 aaKnown RBP30.86■■■□□ 2.53
PABPN1-201ENST00000216727 INPPL1O15357 1258 aa30.85■■■□□ 2.53
PABPN1-201ENST00000216727 B3GAT3O94766 335 aa30.85■■■□□ 2.53
PABPN1-201ENST00000216727 CCT5P48643 541 aa30.85■■■□□ 2.53
PABPN1-201ENST00000216727 PXYLP1Q8TE99 480 aa30.85■■■□□ 2.53
PABPN1-201ENST00000216727 ACBD6Q9BR61 282 aa30.85■■■□□ 2.53
PABPN1-201ENST00000216727 GOLGA8MH3BSY2 632 aa30.85■■■□□ 2.53
PABPN1-201ENST00000216727 TMEM63AO94886 807 aa30.85■■■□□ 2.53
PABPN1-201ENST00000216727 DEFB115Q30KQ5 88 aa30.85■■■□□ 2.53
PABPN1-201ENST00000216727 CD300LGQ6UXG3 332 aa30.85■■■□□ 2.53
PABPN1-201ENST00000216727 ECHDC2Q86YB7 292 aa30.85■■■□□ 2.53
PABPN1-201ENST00000216727 TDRPQ86YL5 185 aa30.85■■■□□ 2.53
PABPN1-201ENST00000216727 ZMIZ2Q8NF64 920 aa30.85■■■□□ 2.53
PABPN1-201ENST00000216727 GLT1D1Q96MS3 346 aa30.85■■■□□ 2.53
PABPN1-201ENST00000216727 XPO6Q96QU8 1125 aaKnown RBP30.85■■■□□ 2.53
PABPN1-201ENST00000216727 RTP3Q9BQQ7 232 aa30.85■■■□□ 2.53
PABPN1-201ENST00000216727 PPCSQ9HAB8 311 aa30.85■■■□□ 2.53
PABPN1-201ENST00000216727 CTNNAL1Q9UBT7 734 aa30.85■■■□□ 2.53
PABPN1-201ENST00000216727 DSEQ9UL01 958 aa30.85■■■□□ 2.53
PABPN1-201ENST00000216727 ZMYND8Q9ULU4 1186 aaPredicted RBP30.85■■■□□ 2.53
PABPN1-201ENST00000216727 M0QZQ0 153 aa30.84■■■□□ 2.53
PABPN1-201ENST00000216727 DAOAP59103 153 aa30.84■■■□□ 2.53
PABPN1-201ENST00000216727 BASP1P80723 227 aaKnown RBP30.84■■■□□ 2.53
PABPN1-201ENST00000216727 CBLBQ13191 982 aa30.84■■■□□ 2.53
PABPN1-201ENST00000216727 FAM131BQ86XD5 332 aa30.84■■■□□ 2.53
PABPN1-201ENST00000216727 CD99L2Q8TCZ2 262 aa30.84■■■□□ 2.53
PABPN1-201ENST00000216727 SMARCD1Q96GM5 515 aa30.84■■■□□ 2.53
PABPN1-201ENST00000216727 XPO7Q9UIA9 1087 aaKnown RBP30.84■■■□□ 2.53
PABPN1-201ENST00000216727 NAALADL1Q9UQQ1 740 aa30.84■■■□□ 2.53
PABPN1-201ENST00000216727 USP3Q9Y6I4 520 aa30.84■■■□□ 2.53
PABPN1-201ENST00000216727 TDRD15B5MCY1 1934 aaKnown RBP30.84■■■□□ 2.53
PABPN1-201ENST00000216727 TCRBV7S3A2A0A539 114 aa30.83■■■□□ 2.53
PABPN1-201ENST00000216727 KCNN4O15554 427 aa30.83■■■□□ 2.53
PABPN1-201ENST00000216727 ZBED1O96006 694 aa30.83■■■□□ 2.53
PABPN1-201ENST00000216727 GAD2Q05329 585 aa30.83■■■□□ 2.53
PABPN1-201ENST00000216727 CCDC38Q502W7 563 aa30.83■■■□□ 2.53
PABPN1-201ENST00000216727 FNBP1LQ5T0N5 605 aa30.83■■■□□ 2.53
PABPN1-201ENST00000216727 METTL23Q86XA0 190 aa30.83■■■□□ 2.53
PABPN1-201ENST00000216727 CDKL3Q8IVW4 592 aaPredicted RBP30.83■■■□□ 2.53
PABPN1-201ENST00000216727 PDIK1LQ8N165 341 aa30.83■■■□□ 2.53
PABPN1-201ENST00000216727 ULBP1Q9BZM6 244 aa30.83■■■□□ 2.53
PABPN1-201ENST00000216727 CSNK1G1Q9HCP0 422 aa30.83■■■□□ 2.53
PABPN1-201ENST00000216727 EXOC1LA0A1B0GW35 172 aa30.83■■■□□ 2.53
PABPN1-201ENST00000216727 CHADO15335 359 aa30.83■■■□□ 2.53
PABPN1-201ENST00000216727 RBL1P28749 1068 aa30.83■■■□□ 2.53
PABPN1-201ENST00000216727 NRLP54845 237 aa30.83■■■□□ 2.53
PABPN1-201ENST00000216727 KCNJ11Q14654 390 aa30.83■■■□□ 2.53
PABPN1-201ENST00000216727 FAM171BQ6P995 826 aa30.83■■■□□ 2.53
PABPN1-201ENST00000216727 B4GALNT4Q76KP1 1039 aa30.83■■■□□ 2.53
PABPN1-201ENST00000216727 CCDC13Q8IYE1 715 aa30.83■■■□□ 2.53
PABPN1-201ENST00000216727 ATXN2LQ8WWM7 1075 aaKnown RBP30.83■■■□□ 2.53
PABPN1-201ENST00000216727 TSEN34Q9BSV6 310 aaKnown RBP30.83■■■□□ 2.53
PABPN1-201ENST00000216727 ACTL7BQ9Y614 415 aa30.83■■■□□ 2.53
PABPN1-201ENST00000216727 EBAG9O00559 213 aa30.82■■■□□ 2.52
PABPN1-201ENST00000216727 ARL4AP40617 200 aa30.82■■■□□ 2.52
PABPN1-201ENST00000216727 PPARDQ03181 441 aa30.82■■■□□ 2.52
PABPN1-201ENST00000216727 RNASELQ05823 741 aaKnown RBP30.82■■■□□ 2.52
PABPN1-201ENST00000216727 C4orf22Q6V702 233 aa30.82■■■□□ 2.52
PABPN1-201ENST00000216727 ZNF473Q8WTR7 871 aaKnown RBP30.82■■■□□ 2.52
PABPN1-201ENST00000216727 KCNK16Q96T55 309 aa30.82■■■□□ 2.52
PABPN1-201ENST00000216727 TMEM30AQ9NV96 361 aa30.82■■■□□ 2.52
PABPN1-201ENST00000216727 TSC2P49815 1807 aa30.82■■■□□ 2.52
PABPN1-201ENST00000216727 C9IYK1 514 aa30.81■■■□□ 2.52
PABPN1-201ENST00000216727 NRP1O14786 923 aa30.81■■■□□ 2.52
PABPN1-201ENST00000216727 CKBP12277 381 aa30.81■■■□□ 2.52
PABPN1-201ENST00000216727 MSS51Q4VC12 460 aa30.81■■■□□ 2.52
PABPN1-201ENST00000216727 SYPL2Q5VXT5 272 aa30.81■■■□□ 2.52
PABPN1-201ENST00000216727 RAET1EQ8TD07 263 aa30.81■■■□□ 2.52
PABPN1-201ENST00000216727 PYROXD1Q8WU10 500 aa30.81■■■□□ 2.52
PABPN1-201ENST00000216727 SLC9A7Q96T83 725 aa30.81■■■□□ 2.52
PABPN1-201ENST00000216727 MAGEB5Q9BZ81 275 aa30.81■■■□□ 2.52
PABPN1-201ENST00000216727 VPS37BQ9H9H4 285 aa30.81■■■□□ 2.52
PABPN1-201ENST00000216727 RGS18Q9NS28 235 aa30.81■■■□□ 2.52
PABPN1-201ENST00000216727 INTS9Q9NV88 658 aaKnown RBP30.81■■■□□ 2.52
PABPN1-201ENST00000216727 HHLA1C9JL84 531 aa30.81■■■□□ 2.52
PABPN1-201ENST00000216727 M0QYT0 321 aa30.81■■■□□ 2.52
PABPN1-201ENST00000216727 FYNP06241 537 aa30.81■■■□□ 2.52
PABPN1-201ENST00000216727 TSHRP16473 764 aa30.81■■■□□ 2.52
PABPN1-201ENST00000216727 PITX1P78337 314 aaPredicted RBP30.81■■■□□ 2.52
PABPN1-201ENST00000216727 GBE1Q04446 702 aa30.81■■■□□ 2.52
PABPN1-201ENST00000216727 RASA2Q15283 850 aa30.81■■■□□ 2.52
PABPN1-201ENST00000216727 HP1BP3Q5SSJ5 553 aaPredicted RBP30.81■■■□□ 2.52
PABPN1-201ENST00000216727 PPP1R21Q6ZMI0 780 aa30.81■■■□□ 2.52
PABPN1-201ENST00000216727 HFE2Q6ZVN8 426 aa30.81■■■□□ 2.52
PABPN1-201ENST00000216727 ATP11CQ8NB49 1132 aa30.81■■■□□ 2.52
PABPN1-201ENST00000216727 INPP5FQ9Y2H2 1132 aa30.81■■■□□ 2.52
PABPN1-201ENST00000216727 GCAP28676 217 aa30.8■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms