RNA–Protein interactions for RNA: ENST00000212355.8

TGFBR3-201, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-201ENST00000212355 PADI4Q9UM07 663 aa14.01□□□□□ -0.17
TGFBR3-201ENST00000212355 C19orf81C9J6K1 198 aa14.01□□□□□ -0.17
TGFBR3-201ENST00000212355 H0YC42 278 aa14.01□□□□□ -0.17
TGFBR3-201ENST00000212355 SOAT2O75908 522 aa14.01□□□□□ -0.17
TGFBR3-201ENST00000212355 HALP42357 657 aa14.01□□□□□ -0.17
TGFBR3-201ENST00000212355 MPZL3Q6UWV2 235 aa14.01□□□□□ -0.17
TGFBR3-201ENST00000212355 ILDR1Q86SU0 546 aaPredicted RBP14.01□□□□□ -0.17
TGFBR3-201ENST00000212355 CALML6Q8TD86 181 aa14.01□□□□□ -0.17
TGFBR3-201ENST00000212355 DDI1Q8WTU0 396 aa14.01□□□□□ -0.17
TGFBR3-201ENST00000212355 DNAJB3Q8WWF6 145 aa14.01□□□□□ -0.17
TGFBR3-201ENST00000212355 RIC8BQ9NVN3 520 aa14.01□□□□□ -0.17
TGFBR3-201ENST00000212355 DCDC2Q9UHG0 476 aa14.01□□□□□ -0.17
TGFBR3-201ENST00000212355 GTF3C4Q9UKN8 822 aa14.01□□□□□ -0.17
TGFBR3-201ENST00000212355 TDRKHQ9Y2W6 561 aaKnown RBP14.01□□□□□ -0.17
TGFBR3-201ENST00000212355 C2orf81A6NN90 581 aa14□□□□□ -0.17
TGFBR3-201ENST00000212355 F5H5T6 163 aa14□□□□□ -0.17
TGFBR3-201ENST00000212355 GLRA3O75311 464 aa14□□□□□ -0.17
TGFBR3-201ENST00000212355 SLC2A4P14672 509 aa14□□□□□ -0.17
TGFBR3-201ENST00000212355 PCSK1P29120 753 aa14□□□□□ -0.17
TGFBR3-201ENST00000212355 ALDH7A1P49419 539 aaKnown RBP14□□□□□ -0.17
TGFBR3-201ENST00000212355 CYLDQ9NQC7 956 aa14□□□□□ -0.17
TGFBR3-201ENST00000212355 PSD3Q9NYI0 1048 aa14□□□□□ -0.17
TGFBR3-201ENST00000212355 KCND2Q9NZV8 630 aa14□□□□□ -0.17
TGFBR3-201ENST00000212355 CRYL1Q9Y2S2 319 aa14□□□□□ -0.17
TGFBR3-201ENST00000212355 RRN3P2A6NIE6 340 aa14□□□□□ -0.17
TGFBR3-201ENST00000212355 TRPC5OSA6NMA1 111 aa14□□□□□ -0.17
TGFBR3-201ENST00000212355 H2AFXP16104 143 aaPredicted RBP14□□□□□ -0.17
TGFBR3-201ENST00000212355 SERPINB1P30740 379 aa14□□□□□ -0.17
TGFBR3-201ENST00000212355 TRIM16LQ309B1 348 aa14□□□□□ -0.17
TGFBR3-201ENST00000212355 ZNF720Q7Z2F6 126 aa14□□□□□ -0.17
TGFBR3-201ENST00000212355 ZFPM1Q8IX07 1006 aa14□□□□□ -0.17
TGFBR3-201ENST00000212355 LPCAT1Q8NF37 534 aa14□□□□□ -0.17
TGFBR3-201ENST00000212355 APBA2Q99767 749 aa14□□□□□ -0.17
TGFBR3-201ENST00000212355 KLHL25Q9H0H3 589 aa14□□□□□ -0.17
TGFBR3-201ENST00000212355 DNPEPQ9ULA0 475 aa14□□□□□ -0.17
TGFBR3-201ENST00000212355 SUPT20HL2P0C7V6 817 aa14□□□□□ -0.17
TGFBR3-201ENST00000212355 IL5RAQ01344 420 aa14□□□□□ -0.17
TGFBR3-201ENST00000212355 ACAP1Q15027 740 aa14□□□□□ -0.17
TGFBR3-201ENST00000212355 STILQ15468 1287 aa14□□□□□ -0.17
TGFBR3-201ENST00000212355 TRIM69Q86WT6 500 aa14□□□□□ -0.17
TGFBR3-201ENST00000212355 SERBP1Q8NC51 408 aaKnown RBP eCLIP14□□□□□ -0.17
TGFBR3-201ENST00000212355 ANKRD49Q8WVL7 239 aa14□□□□□ -0.17
TGFBR3-201ENST00000212355 MPP4Q96JB8 637 aa14□□□□□ -0.17
TGFBR3-201ENST00000212355 ENTPD7Q9NQZ7 604 aa14□□□□□ -0.17
TGFBR3-201ENST00000212355 KCNK1O00180 336 aa14□□□□□ -0.17
TGFBR3-201ENST00000212355 MAPK9P45984 424 aa14□□□□□ -0.17
TGFBR3-201ENST00000212355 NDST1P52848 882 aa14□□□□□ -0.17
TGFBR3-201ENST00000212355 MMRN1Q13201 1228 aa14□□□□□ -0.17
TGFBR3-201ENST00000212355 SNX17Q15036 470 aa14□□□□□ -0.17
TGFBR3-201ENST00000212355 DET1Q7L5Y6 550 aa14□□□□□ -0.17
TGFBR3-201ENST00000212355 UTP15Q8TED0 518 aaKnown RBP14□□□□□ -0.17
TGFBR3-201ENST00000212355 TMEM176AQ96HP8 235 aa14□□□□□ -0.17
TGFBR3-201ENST00000212355 VANGL2Q9ULK5 521 aa14□□□□□ -0.17
TGFBR3-201ENST00000212355 EIF3LQ9Y262 564 aaKnown RBP14□□□□□ -0.17
TGFBR3-201ENST00000212355 KRT87PA6NCN2 255 aa14□□□□□ -0.17
TGFBR3-201ENST00000212355 NDUFB5O43674 189 aa14□□□□□ -0.17
TGFBR3-201ENST00000212355 ENTPD3O75355 529 aa14□□□□□ -0.17
TGFBR3-201ENST00000212355 RPA3P35244 121 aaPredicted RBP14□□□□□ -0.17
TGFBR3-201ENST00000212355 NRF1Q16656 503 aa14□□□□□ -0.17
TGFBR3-201ENST00000212355 TRIM48Q8IWZ4 208 aa14□□□□□ -0.17
TGFBR3-201ENST00000212355 TBCDQ9BTW9 1192 aa14□□□□□ -0.17
TGFBR3-201ENST00000212355 KLHL4Q9C0H6 718 aa14□□□□□ -0.17
TGFBR3-201ENST00000212355 SLC38A7Q9NVC3 462 aa14□□□□□ -0.17
TGFBR3-201ENST00000212355 SPATA31A1Q5TZJ5 1347 aa14□□□□□ -0.17
TGFBR3-201ENST00000212355 RGL2O15211 777 aa13.99□□□□□ -0.17
TGFBR3-201ENST00000212355 MAGEB2O15479 319 aa13.99□□□□□ -0.17
TGFBR3-201ENST00000212355 TBC1D12O60347 775 aa13.99□□□□□ -0.17
TGFBR3-201ENST00000212355 CDH2P19022 906 aaPredicted RBP13.99□□□□□ -0.17
TGFBR3-201ENST00000212355 DSG3P32926 999 aa13.99□□□□□ -0.17
TGFBR3-201ENST00000212355 CAP2P40123 477 aa13.99□□□□□ -0.17
TGFBR3-201ENST00000212355 CSNK2BP67870 215 aa13.99□□□□□ -0.17
TGFBR3-201ENST00000212355 TRIM28Q13263 835 aaKnown RBP13.99□□□□□ -0.17
TGFBR3-201ENST00000212355 CBWD6Q4V339 395 aa13.99□□□□□ -0.17
TGFBR3-201ENST00000212355 ATP6AP1LQ52LC2 224 aa13.99□□□□□ -0.17
TGFBR3-201ENST00000212355 CBWD3Q5JTY5 395 aa13.99□□□□□ -0.17
TGFBR3-201ENST00000212355 CBWD5Q5RIA9 395 aa13.99□□□□□ -0.17
TGFBR3-201ENST00000212355 ZNF677Q86XU0 584 aa13.99□□□□□ -0.17
TGFBR3-201ENST00000212355 DCP1BQ8IZD4 617 aaKnown RBP13.99□□□□□ -0.17
TGFBR3-201ENST00000212355 PYDC1Q8WXC3 89 aa13.99□□□□□ -0.17
TGFBR3-201ENST00000212355 KRT35Q92764 455 aa13.99□□□□□ -0.17
TGFBR3-201ENST00000212355 KAT5Q92993 513 aa13.99□□□□□ -0.17
TGFBR3-201ENST00000212355 SLITRK1Q96PX8 696 aa13.99□□□□□ -0.17
TGFBR3-201ENST00000212355 VPS28Q9UK41 221 aa13.99□□□□□ -0.17
TGFBR3-201ENST00000212355 PCDHAC2Q9Y5I4 1007 aa13.99□□□□□ -0.17
TGFBR3-201ENST00000212355 MAGEA13PA6NCF6 341 aa13.99□□□□□ -0.17
TGFBR3-201ENST00000212355 CPA3P15088 417 aa13.99□□□□□ -0.17
TGFBR3-201ENST00000212355 SYN2Q92777 582 aaPredicted RBP13.99□□□□□ -0.17
TGFBR3-201ENST00000212355 PAWRQ96IZ0 340 aaKnown RBP13.99□□□□□ -0.17
TGFBR3-201ENST00000212355 PARK7Q99497 189 aaKnown RBP13.99□□□□□ -0.17
TGFBR3-201ENST00000212355 ATP6V1HQ9UI12 483 aa13.99□□□□□ -0.17
TGFBR3-201ENST00000212355 HPSEQ9Y251 543 aa13.99□□□□□ -0.17
TGFBR3-201ENST00000212355 PAX7P23759 505 aa13.99□□□□□ -0.17
TGFBR3-201ENST00000212355 VAC14Q08AM6 782 aa13.99□□□□□ -0.17
TGFBR3-201ENST00000212355 KCNK18Q7Z418 384 aa13.99□□□□□ -0.17
TGFBR3-201ENST00000212355 ATP6V0D2Q8N8Y2 350 aa13.99□□□□□ -0.17
TGFBR3-201ENST00000212355 RTFDC1Q9BY42 306 aaPredicted RBP13.99□□□□□ -0.17
TGFBR3-201ENST00000212355 DDX43Q9NXZ2 648 aaKnown RBP13.99□□□□□ -0.17
TGFBR3-201ENST00000212355 WHRNQ9P202 907 aa13.99□□□□□ -0.17
TGFBR3-201ENST00000212355 PCDHB8Q9UN66 801 aa13.99□□□□□ -0.17
TGFBR3-201ENST00000212355 DDX3XO00571 662 aaKnown RBP eCLIP13.99□□□□□ -0.176e-8■■■■□ 25.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms