RNA–Protein interactions for RNA: ENST00000173898.11

TRO-201, Transcript of trophinin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRO, Length 4,647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRO-201ENST00000173898 LHX1P48742 406 aa12.38□□□□□ -0.43
TRO-201ENST00000173898 CYLC2Q14093 348 aaPredicted RBP12.38□□□□□ -0.43
TRO-201ENST00000173898 KPNB1Q14974 876 aaKnown RBP12.38□□□□□ -0.43
TRO-201ENST00000173898 ADCK1Q86TW2 530 aa12.38□□□□□ -0.43
TRO-201ENST00000173898 P3H2Q8IVL5 708 aa12.38□□□□□ -0.43
TRO-201ENST00000173898 ZNF333Q96JL9 665 aa12.38□□□□□ -0.43
TRO-201ENST00000173898 A1CFQ9NQ94 594 aaKnown RBP12.38□□□□□ -0.43
TRO-201ENST00000173898 TPH1P17752 444 aa12.37□□□□□ -0.43
TRO-201ENST00000173898 AMPD1P23109 780 aa12.37□□□□□ -0.43
TRO-201ENST00000173898 YWHAZP63104 245 aaKnown RBP12.37□□□□□ -0.43
TRO-201ENST00000173898 POU6F1Q14863 301 aa12.37□□□□□ -0.43
TRO-201ENST00000173898 RNF180Q86T96 592 aa12.37□□□□□ -0.43
TRO-201ENST00000173898 GFM2Q969S9 779 aaKnown RBP12.37□□□□□ -0.43
TRO-201ENST00000173898 TMEM169Q96HH4 297 aa12.37□□□□□ -0.43
TRO-201ENST00000173898 HIC2Q96JB3 615 aa12.37□□□□□ -0.43
TRO-201ENST00000173898 PDP2Q9P2J9 529 aa12.37□□□□□ -0.43
TRO-201ENST00000173898 SFMBT1Q9UHJ3 866 aa12.37□□□□□ -0.43
TRO-201ENST00000173898 M0R3G1 203 aa12.37□□□□□ -0.43
TRO-201ENST00000173898 DEAF1O75398 565 aaPredicted RBP12.37□□□□□ -0.43
TRO-201ENST00000173898 ASS1P00966 412 aaKnown RBP12.37□□□□□ -0.43
TRO-201ENST00000173898 ZSCAN5DPP0CG00 497 aa12.37□□□□□ -0.43
TRO-201ENST00000173898 EIF4BP23588 611 aaKnown RBP12.37□□□□□ -0.43
TRO-201ENST00000173898 AKAP5P24588 427 aa12.37□□□□□ -0.43
TRO-201ENST00000173898 PSMA4P25789 261 aaKnown RBP12.37□□□□□ -0.43
TRO-201ENST00000173898 HOXA10P31260 410 aaPredicted RBP12.37□□□□□ -0.43
TRO-201ENST00000173898 TRPC1P48995 793 aa12.37□□□□□ -0.43
TRO-201ENST00000173898 N4BP2L1Q5TBK1 243 aaPredicted RBP12.37□□□□□ -0.43
TRO-201ENST00000173898 PLD3Q8IV08 490 aa12.37□□□□□ -0.43
TRO-201ENST00000173898 ETNPPLQ8TBG4 499 aa12.37□□□□□ -0.43
TRO-201ENST00000173898 ATXN2LQ8WWM7 1075 aaKnown RBP12.37□□□□□ -0.43
TRO-201ENST00000173898 MKL1Q969V6 931 aa12.37□□□□□ -0.43
TRO-201ENST00000173898 PRPF18Q99633 342 aaKnown RBP12.37□□□□□ -0.43
TRO-201ENST00000173898 COLEC11Q9BWP8 271 aa12.37□□□□□ -0.43
TRO-201ENST00000173898 UNKQ9C0B0 810 aaKnown RBP12.37□□□□□ -0.43
TRO-201ENST00000173898 DRG1Q9Y295 367 aaKnown RBP12.37□□□□□ -0.43
TRO-201ENST00000173898 PCDHB7Q9Y5E2 793 aa12.37□□□□□ -0.43
TRO-201ENST00000173898 CASTOR2A6NHX0 329 aa12.37□□□□□ -0.43
TRO-201ENST00000173898 NCAM2O15394 837 aa12.37□□□□□ -0.43
TRO-201ENST00000173898 PSMD10O75832 226 aa12.37□□□□□ -0.43
TRO-201ENST00000173898 RBP1P09455 135 aa12.37□□□□□ -0.43
TRO-201ENST00000173898 SLURP2P0DP57 97 aa12.37□□□□□ -0.43
TRO-201ENST00000173898 GP5P40197 560 aa12.37□□□□□ -0.43
TRO-201ENST00000173898 RGS2P41220 211 aa12.37□□□□□ -0.43
TRO-201ENST00000173898 EVX2Q03828 476 aa12.37□□□□□ -0.43
TRO-201ENST00000173898 UGT3A1Q6NUS8 523 aa12.37□□□□□ -0.43
TRO-201ENST00000173898 ILDR2Q71H61 639 aa12.37□□□□□ -0.43
TRO-201ENST00000173898 YAF2Q8IY57 180 aa12.37□□□□□ -0.43
TRO-201ENST00000173898 MICU2Q8IYU8 434 aa12.37□□□□□ -0.43
TRO-201ENST00000173898 BAP1Q92560 729 aa12.37□□□□□ -0.43
TRO-201ENST00000173898 NT5MQ9NPB1 228 aa12.37□□□□□ -0.43
TRO-201ENST00000173898 EXOSC4Q9NPD3 245 aaKnown RBP12.37□□□□□ -0.43
TRO-201ENST00000173898 ADARB2Q9NS39 739 aaKnown RBP12.37□□□□□ -0.43
TRO-201ENST00000173898 DDX43Q9NXZ2 648 aaKnown RBP12.37□□□□□ -0.43
TRO-201ENST00000173898 SPASTQ9UBP0 616 aa12.37□□□□□ -0.43
TRO-201ENST00000173898 PNMA8BQ9ULN7 279 aaPredicted RBP12.37□□□□□ -0.43
TRO-201ENST00000173898 GAKO14976 1311 aa12.36□□□□□ -0.43
TRO-201ENST00000173898 ITSN1Q15811 1721 aa12.36□□□□□ -0.43
TRO-201ENST00000173898 RGL2O15211 777 aa12.36□□□□□ -0.43
TRO-201ENST00000173898 H2AFYO75367 372 aaKnown RBP12.36□□□□□ -0.43
TRO-201ENST00000173898 GHRP10912 638 aa12.36□□□□□ -0.43
TRO-201ENST00000173898 DDR1Q08345 913 aa12.36□□□□□ -0.43
TRO-201ENST00000173898 ADIGQ0VDE8 80 aa12.36□□□□□ -0.43
TRO-201ENST00000173898 ZNF786Q8N393 782 aa12.36□□□□□ -0.43
TRO-201ENST00000173898 HTR3CQ8WXA8 447 aa12.36□□□□□ -0.43
TRO-201ENST00000173898 SRPK1Q96SB4 655 aaKnown RBP12.36□□□□□ -0.43
TRO-201ENST00000173898 SYT15Q9BQS2 421 aa12.36□□□□□ -0.43
TRO-201ENST00000173898 C10orf88Q9H8K7 445 aa12.36□□□□□ -0.43
TRO-201ENST00000173898 MST1RQ04912 1400 aa12.36□□□□□ -0.43
TRO-201ENST00000173898 SLC12A8A0AV02 714 aa12.36□□□□□ -0.43
TRO-201ENST00000173898 SLCO1B7G3V0H7 640 aa12.36□□□□□ -0.43
TRO-201ENST00000173898 WNT7AO00755 349 aa12.36□□□□□ -0.43
TRO-201ENST00000173898 FCHO1O14526 889 aa12.36□□□□□ -0.43
TRO-201ENST00000173898 MICAL2O94851 1124 aa12.36□□□□□ -0.43
TRO-201ENST00000173898 CALCAP01258 141 aa12.36□□□□□ -0.43
TRO-201ENST00000173898 CLK1P49759 484 aaKnown RBP12.36□□□□□ -0.43
TRO-201ENST00000173898 NEK2P51955 445 aa12.36□□□□□ -0.43
TRO-201ENST00000173898 TJAP1Q5JTD0 557 aa12.36□□□□□ -0.43
TRO-201ENST00000173898 ANKS3Q6ZW76 656 aa12.36□□□□□ -0.43
TRO-201ENST00000173898 DDX28Q9NUL7 540 aaKnown RBP12.36□□□□□ -0.43
TRO-201ENST00000173898 LACTBL1A8MY62 500 aa12.36□□□□□ -0.43
TRO-201ENST00000173898 KCNA4P22459 653 aa12.36□□□□□ -0.43
TRO-201ENST00000173898 ALDH5A1P51649 535 aaPredicted RBP12.36□□□□□ -0.43
TRO-201ENST00000173898 GALNTL6Q49A17 601 aa12.36□□□□□ -0.43
TRO-201ENST00000173898 PTAR1Q7Z6K3 402 aaPredicted RBP12.36□□□□□ -0.43
TRO-201ENST00000173898 DEFB107AQ8IZN7 70 aa12.36□□□□□ -0.43
TRO-201ENST00000173898 EIF1ADQ8N9N8 165 aaKnown RBP12.36□□□□□ -0.43
TRO-201ENST00000173898 P2RX7Q99572 595 aaKnown RBP12.36□□□□□ -0.43
TRO-201ENST00000173898 NEUROG2Q9H2A3 272 aa12.36□□□□□ -0.43
TRO-201ENST00000173898 UTP6Q9NYH9 597 aaKnown RBP12.36□□□□□ -0.43
TRO-201ENST00000173898 FAM198AQ9UFP1 575 aa12.36□□□□□ -0.43
TRO-201ENST00000173898 HNRNPRO43390 633 aaKnown RBP12.36□□□□□ -0.43
TRO-201ENST00000173898 ADRA1DP25100 572 aa12.36□□□□□ -0.43
TRO-201ENST00000173898 HSPA13P48723 471 aa12.36□□□□□ -0.43
TRO-201ENST00000173898 IRX1P78414 480 aaPredicted RBP12.36□□□□□ -0.43
TRO-201ENST00000173898 GRIK4Q16099 956 aa12.36□□□□□ -0.43
TRO-201ENST00000173898 CTXN3Q4LDR2 81 aa12.36□□□□□ -0.43
TRO-201ENST00000173898 KCNT2Q6UVM3 1135 aa12.36□□□□□ -0.43
TRO-201ENST00000173898 HORMAD1Q86X24 394 aa12.36□□□□□ -0.43
TRO-201ENST00000173898 CCDC60Q8IWA6 550 aaPredicted RBP12.36□□□□□ -0.43
TRO-201ENST00000173898 GANQ9H2C0 597 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms