RNA–Protein interactions for RNA: ENST00000162749.6

TNFRSF1A-201, Transcript of TNF receptor superfamily member 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1A, Length 2,223 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-201ENST00000162749 PCDH18Q9HCL0 1135 aa20.5■□□□□ 0.87
TNFRSF1A-201ENST00000162749 SAE1Q9UBE0 346 aaPredicted RBP20.5■□□□□ 0.87
TNFRSF1A-201ENST00000162749 FEZ2Q9UHY8 353 aaPredicted RBP20.5■□□□□ 0.87
TNFRSF1A-201ENST00000162749 SNX24Q9Y343 169 aa20.5■□□□□ 0.87
TNFRSF1A-201ENST00000162749 M0QYT0 321 aa20.49■□□□□ 0.87
TNFRSF1A-201ENST00000162749 TNFRSF10BO14763 440 aa20.49■□□□□ 0.87
TNFRSF1A-201ENST00000162749 ACTN2P35609 894 aa20.49■□□□□ 0.87
TNFRSF1A-201ENST00000162749 RPL21P46778 160 aaKnown RBP20.49■□□□□ 0.87
TNFRSF1A-201ENST00000162749 SLC5A3P53794 718 aa20.49■□□□□ 0.87
TNFRSF1A-201ENST00000162749 DEFB103AP81534 67 aa20.49■□□□□ 0.87
TNFRSF1A-201ENST00000162749 KRT81Q14533 505 aa20.49■□□□□ 0.87
TNFRSF1A-201ENST00000162749 MFSD5Q6N075 450 aa20.49■□□□□ 0.87
TNFRSF1A-201ENST00000162749 TAS1R1Q7RTX1 841 aa20.49■□□□□ 0.87
TNFRSF1A-201ENST00000162749 FAM131BQ86XD5 332 aa20.49■□□□□ 0.87
TNFRSF1A-201ENST00000162749 MAP7D3Q8IWC1 876 aa20.49■□□□□ 0.87
TNFRSF1A-201ENST00000162749 IRGQQ8WZA9 623 aa20.49■□□□□ 0.87
TNFRSF1A-201ENST00000162749 OR6C75A6NL08 312 aa20.49■□□□□ 0.87
TNFRSF1A-201ENST00000162749 EFEMP2O95967 443 aa20.49■□□□□ 0.87
TNFRSF1A-201ENST00000162749 GAS8O95995 478 aa20.49■□□□□ 0.87
TNFRSF1A-201ENST00000162749 NCAM1P13591 858 aa20.49■□□□□ 0.87
TNFRSF1A-201ENST00000162749 DPYSL2Q16555 572 aa20.49■□□□□ 0.87
TNFRSF1A-201ENST00000162749 RSPO2Q6UXX9 243 aaPredicted RBP20.49■□□□□ 0.87
TNFRSF1A-201ENST00000162749 RFX6Q8HWS3 928 aa20.49■□□□□ 0.87
TNFRSF1A-201ENST00000162749 ACTL9Q8TC94 416 aa20.49■□□□□ 0.87
TNFRSF1A-201ENST00000162749 ARL8AQ96BM9 186 aa20.49■□□□□ 0.87
TNFRSF1A-201ENST00000162749 PGLYRP2Q96PD5 576 aa20.49■□□□□ 0.87
TNFRSF1A-201ENST00000162749 RC3H2Q9HBD1 1191 aaKnown RBP20.49■□□□□ 0.87
TNFRSF1A-201ENST00000162749 GRHL1Q9NZI5 618 aa20.49■□□□□ 0.87
TNFRSF1A-201ENST00000162749 AP4E1Q9UPM8 1137 aa20.49■□□□□ 0.87
TNFRSF1A-201ENST00000162749 KIAA1671Q9BY89 1806 aa20.49■□□□□ 0.87
TNFRSF1A-201ENST00000162749 TBC1D4O60343 1298 aa20.48■□□□□ 0.87
TNFRSF1A-201ENST00000162749 OTUD4Q01804 1114 aaKnown RBP20.48■□□□□ 0.87
TNFRSF1A-201ENST00000162749 OASLQ15646 514 aaKnown RBP20.48■□□□□ 0.87
TNFRSF1A-201ENST00000162749 VSTM1Q6UX27 236 aa20.48■□□□□ 0.87
TNFRSF1A-201ENST00000162749 VSIG1Q86XK7 387 aa20.48■□□□□ 0.87
TNFRSF1A-201ENST00000162749 ZNF689Q96CS4 500 aaPredicted RBP20.48■□□□□ 0.87
TNFRSF1A-201ENST00000162749 TTPALQ9BTX7 342 aa20.48■□□□□ 0.87
TNFRSF1A-201ENST00000162749 MAGEB5Q9BZ81 275 aa20.48■□□□□ 0.87
TNFRSF1A-201ENST00000162749 PIGVQ9NUD9 493 aa20.48■□□□□ 0.87
TNFRSF1A-201ENST00000162749 NEU2Q9Y3R4 380 aa20.48■□□□□ 0.87
TNFRSF1A-201ENST00000162749 SYNJ2BP-COX16A0A087WUM0 186 aa20.47■□□□□ 0.87
TNFRSF1A-201ENST00000162749 GOLGA6CA6NDK9 693 aa20.47■□□□□ 0.87
TNFRSF1A-201ENST00000162749 APOC4-APOC2K7ER74 178 aa20.47■□□□□ 0.87
TNFRSF1A-201ENST00000162749 OPA1O60313 960 aa20.47■□□□□ 0.87
TNFRSF1A-201ENST00000162749 APOC2P02655 101 aa20.47■□□□□ 0.87
TNFRSF1A-201ENST00000162749 GOLGA6DP0CG33 693 aa20.47■□□□□ 0.87
TNFRSF1A-201ENST00000162749 L1CAMP32004 1257 aa20.47■□□□□ 0.87
TNFRSF1A-201ENST00000162749 RDXP35241 583 aaKnown RBP20.47■□□□□ 0.87
TNFRSF1A-201ENST00000162749 WDR5P61964 334 aaKnown RBP20.47■□□□□ 0.87
TNFRSF1A-201ENST00000162749 PTK6Q13882 451 aa20.47■□□□□ 0.87
TNFRSF1A-201ENST00000162749 TTMPQ5BVD1 217 aa20.47■□□□□ 0.87
TNFRSF1A-201ENST00000162749 PPP6R3Q5H9R7 873 aaPredicted RBP20.47■□□□□ 0.87
TNFRSF1A-201ENST00000162749 SYDE1Q6ZW31 735 aaPredicted RBP20.47■□□□□ 0.87
TNFRSF1A-201ENST00000162749 SCN4BQ8IWT1 228 aa20.47■□□□□ 0.87
TNFRSF1A-201ENST00000162749 ATAD1Q8NBU5 361 aa20.47■□□□□ 0.87
TNFRSF1A-201ENST00000162749 SLC35B2Q8TB61 432 aa20.47■□□□□ 0.87
TNFRSF1A-201ENST00000162749 EDEM1Q92611 657 aa20.47■□□□□ 0.87
TNFRSF1A-201ENST00000162749 NKD2Q969F2 451 aaPredicted RBP20.47■□□□□ 0.87
TNFRSF1A-201ENST00000162749 RNF157Q96PX1 679 aa20.47■□□□□ 0.87
TNFRSF1A-201ENST00000162749 ZNF670Q9BS34 389 aa20.47■□□□□ 0.87
TNFRSF1A-201ENST00000162749 DHX35Q9H5Z1 703 aaKnown RBP20.47■□□□□ 0.87
TNFRSF1A-201ENST00000162749 ZDHHC18Q9NUE0 388 aa20.47■□□□□ 0.87
TNFRSF1A-201ENST00000162749 MTMR10Q9NXD2 777 aa20.47■□□□□ 0.87
TNFRSF1A-201ENST00000162749 GOLGA6AQ9NYA3 693 aa20.47■□□□□ 0.87
TNFRSF1A-201ENST00000162749 COX16Q9P0S2 106 aa20.47■□□□□ 0.87
TNFRSF1A-201ENST00000162749 PCDHB5Q9Y5E4 795 aa20.47■□□□□ 0.87
TNFRSF1A-201ENST00000162749 GOLGA8KD6RF30 607 aa20.47■□□□□ 0.87
TNFRSF1A-201ENST00000162749 AMHP03971 560 aa20.47■□□□□ 0.87
TNFRSF1A-201ENST00000162749 VCPP55072 806 aaKnown RBP20.47■□□□□ 0.87
TNFRSF1A-201ENST00000162749 NME3Q13232 169 aa20.47■□□□□ 0.87
TNFRSF1A-201ENST00000162749 ZSCAN26Q16670 478 aa20.47■□□□□ 0.87
TNFRSF1A-201ENST00000162749 BSPRYQ5W0U4 402 aa20.47■□□□□ 0.87
TNFRSF1A-201ENST00000162749 FAM117BQ6P1L5 589 aa20.47■□□□□ 0.87
TNFRSF1A-201ENST00000162749 ANKS3Q6ZW76 656 aa20.47■□□□□ 0.87
TNFRSF1A-201ENST00000162749 TTC9BQ8N6N2 239 aa20.47■□□□□ 0.87
TNFRSF1A-201ENST00000162749 GOLGA6L1Q8N7Z2 621 aa20.47■□□□□ 0.87
TNFRSF1A-201ENST00000162749 TTC13Q8NBP0 860 aa20.47■□□□□ 0.87
TNFRSF1A-201ENST00000162749 SLC7A14Q8TBB6 771 aa20.47■□□□□ 0.87
TNFRSF1A-201ENST00000162749 ADAM32Q8TC27 787 aa20.47■□□□□ 0.87
TNFRSF1A-201ENST00000162749 VN1R3Q9BXE9 311 aa20.47■□□□□ 0.87
TNFRSF1A-201ENST00000162749 MAK16Q9BXY0 300 aaKnown RBP20.47■□□□□ 0.87
TNFRSF1A-201ENST00000162749 ACRP10323 421 aa20.46■□□□□ 0.87
TNFRSF1A-201ENST00000162749 CPB1P15086 417 aa20.46■□□□□ 0.87
TNFRSF1A-201ENST00000162749 PECAM1P16284 738 aaPredicted RBP20.46■□□□□ 0.87
TNFRSF1A-201ENST00000162749 HSPA9P38646 679 aaKnown RBP20.46■□□□□ 0.87
TNFRSF1A-201ENST00000162749 IFRD2Q12894 506 aaPredicted RBP20.46■□□□□ 0.87
TNFRSF1A-201ENST00000162749 ANKRD20A8PQ5CZ79 823 aa20.46■□□□□ 0.87
TNFRSF1A-201ENST00000162749 RNF168Q8IYW5 571 aaPredicted RBP20.46■□□□□ 0.87
TNFRSF1A-201ENST00000162749 TMEM199Q8N511 208 aa20.46■□□□□ 0.87
TNFRSF1A-201ENST00000162749 FAM76AQ8TAV0 307 aa20.46■□□□□ 0.87
TNFRSF1A-201ENST00000162749 IGSF21Q96ID5 467 aa20.46■□□□□ 0.87
TNFRSF1A-201ENST00000162749 ZNF148Q9UQR1 794 aa20.46■□□□□ 0.87
TNFRSF1A-201ENST00000162749 KRT14P02533 472 aa20.46■□□□□ 0.87
TNFRSF1A-201ENST00000162749 PLTPP55058 493 aa20.46■□□□□ 0.87
TNFRSF1A-201ENST00000162749 ARPP19P56211 112 aa20.46■□□□□ 0.87
TNFRSF1A-201ENST00000162749 DEUP1Q05D60 604 aa20.46■□□□□ 0.87
TNFRSF1A-201ENST00000162749 GPR17Q13304 367 aa20.46■□□□□ 0.87
TNFRSF1A-201ENST00000162749 TRIP13Q15645 432 aaPredicted RBP20.46■□□□□ 0.87
TNFRSF1A-201ENST00000162749 DDR2Q16832 855 aa20.46■□□□□ 0.87
TNFRSF1A-201ENST00000162749 CFAP58Q5T655 872 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms