RNA–Protein interactions for RNA: ENST00000035307.6

CHPF2-201, Transcript of chondroitin polymerizing factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF2, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-201ENST00000035307 ELK3P41970 407 aa12.5□□□□□ -0.41
CHPF2-201ENST00000035307 TPD52P55327 224 aaPredicted RBP12.5□□□□□ -0.41
CHPF2-201ENST00000035307 DEUP1Q05D60 604 aa12.5□□□□□ -0.41
CHPF2-201ENST00000035307 ARL13BQ3SXY8 428 aa12.5□□□□□ -0.41
CHPF2-201ENST00000035307 COBLL1Q53SF7 1204 aa12.5□□□□□ -0.41
CHPF2-201ENST00000035307 RASSF3Q86WH2 238 aa12.5□□□□□ -0.41
CHPF2-201ENST00000035307 ZNF512Q96ME7 567 aaPredicted RBP12.5□□□□□ -0.41
CHPF2-201ENST00000035307 CCDC68Q9H2F9 335 aa12.5□□□□□ -0.41
CHPF2-201ENST00000035307 SARS2Q9NP81 518 aaKnown RBP12.5□□□□□ -0.41
CHPF2-201ENST00000035307 CNTRLQ7Z7A1 2325 aa12.5□□□□□ -0.41
CHPF2-201ENST00000035307 MCM3APO60318 1980 aa12.5□□□□□ -0.41
CHPF2-201ENST00000035307 SEPT4O43236 478 aa12.5□□□□□ -0.41
CHPF2-201ENST00000035307 DGKIO75912 1065 aa12.5□□□□□ -0.41
CHPF2-201ENST00000035307 EDNRBP24530 442 aa12.5□□□□□ -0.41
CHPF2-201ENST00000035307 CLCNKBP51801 687 aa12.5□□□□□ -0.41
CHPF2-201ENST00000035307 C1orf146Q5VVC0 180 aa12.5□□□□□ -0.41
CHPF2-201ENST00000035307 LONP2Q86WA8 852 aa12.5□□□□□ -0.41
CHPF2-201ENST00000035307 EXD1Q8NHP7 514 aa12.5□□□□□ -0.41
CHPF2-201ENST00000035307 GIPC2Q8TF65 315 aa12.5□□□□□ -0.41
CHPF2-201ENST00000035307 ZNF669Q96BR6 464 aaPredicted RBP12.5□□□□□ -0.41
CHPF2-201ENST00000035307 PABPC5Q96DU9 382 aaKnown RBP12.5□□□□□ -0.41
CHPF2-201ENST00000035307 CPXM1Q96SM3 734 aa12.5□□□□□ -0.41
CHPF2-201ENST00000035307 ELOVL4Q9GZR5 314 aa12.5□□□□□ -0.41
CHPF2-201ENST00000035307 TMEM39AQ9NV64 488 aa12.5□□□□□ -0.41
CHPF2-201ENST00000035307 SMPD4Q9NXE4 827 aa12.5□□□□□ -0.41
CHPF2-201ENST00000035307 PSTPIP1O43586 416 aa12.5□□□□□ -0.41
CHPF2-201ENST00000035307 SOAT2O75908 522 aa12.5□□□□□ -0.41
CHPF2-201ENST00000035307 TKTL1P51854 596 aa12.5□□□□□ -0.41
CHPF2-201ENST00000035307 MARSP56192 900 aaKnown RBP12.5□□□□□ -0.41
CHPF2-201ENST00000035307 MTFR1Q15390 333 aa12.5□□□□□ -0.41
CHPF2-201ENST00000035307 CCNG2Q16589 344 aa12.5□□□□□ -0.41
CHPF2-201ENST00000035307 C1orf220Q5T0J3 134 aa12.5□□□□□ -0.41
CHPF2-201ENST00000035307 PPIL6Q8IXY8 311 aa12.5□□□□□ -0.41
CHPF2-201ENST00000035307 GBP7Q8N8V2 638 aaPredicted RBP12.5□□□□□ -0.41
CHPF2-201ENST00000035307 PRCCQ92733 491 aaPredicted RBP12.5□□□□□ -0.41
CHPF2-201ENST00000035307 SYT15Q9BQS2 421 aa12.5□□□□□ -0.41
CHPF2-201ENST00000035307 ASB7Q9H672 318 aa12.5□□□□□ -0.41
CHPF2-201ENST00000035307 FAM8A1Q9UBU6 413 aa12.5□□□□□ -0.41
CHPF2-201ENST00000035307 TRIM33Q9UPN9 1127 aa12.5□□□□□ -0.41
CHPF2-201ENST00000035307 NR2E3Q9Y5X4 410 aa12.5□□□□□ -0.41
CHPF2-201ENST00000035307 PTCH2Q9Y6C5 1203 aa12.5□□□□□ -0.41
CHPF2-201ENST00000035307 DDX3YO15523 660 aaKnown RBP12.49□□□□□ -0.41
CHPF2-201ENST00000035307 AVILO75366 819 aa12.49□□□□□ -0.41
CHPF2-201ENST00000035307 PYGBP11216 843 aa12.49□□□□□ -0.41
CHPF2-201ENST00000035307 RAG1P15918 1043 aa12.49□□□□□ -0.41
CHPF2-201ENST00000035307 CHRNB2P17787 502 aa12.49□□□□□ -0.41
CHPF2-201ENST00000035307 VEGFBP49765 207 aa12.49□□□□□ -0.41
CHPF2-201ENST00000035307 CENPCQ03188 943 aa12.49□□□□□ -0.41
CHPF2-201ENST00000035307 SH3PXD2AQ5TCZ1 1133 aa12.49□□□□□ -0.41
CHPF2-201ENST00000035307 RASIP1Q5U651 963 aa12.49□□□□□ -0.41
CHPF2-201ENST00000035307 ATG16L1Q676U5 607 aa12.49□□□□□ -0.41
CHPF2-201ENST00000035307 DUPD1Q68J44 220 aa12.49□□□□□ -0.41
CHPF2-201ENST00000035307 ZCCHC23Q6ZST2 131 aa12.49□□□□□ -0.41
CHPF2-201ENST00000035307 OTOP2Q7RTS6 562 aa12.49□□□□□ -0.41
CHPF2-201ENST00000035307 DBF4BQ8NFT6 615 aa12.49□□□□□ -0.41
CHPF2-201ENST00000035307 CELF6Q96J87 481 aaKnown RBP12.49□□□□□ -0.41
CHPF2-201ENST00000035307 DNAJC25-GNG10A0A024R161 153 aa12.49□□□□□ -0.41
CHPF2-201ENST00000035307 HOXC6P09630 235 aa12.49□□□□□ -0.41
CHPF2-201ENST00000035307 TCF4P15884 667 aa12.49□□□□□ -0.41
CHPF2-201ENST00000035307 EPHB2P29323 1055 aa12.49□□□□□ -0.41
CHPF2-201ENST00000035307 GLRBP48167 497 aa12.49□□□□□ -0.41
CHPF2-201ENST00000035307 ATXN1P54253 815 aaKnown RBP12.49□□□□□ -0.41
CHPF2-201ENST00000035307 AUHQ13825 339 aaKnown RBP12.49□□□□□ -0.41
CHPF2-201ENST00000035307 CHI3L2Q15782 390 aa12.49□□□□□ -0.41
CHPF2-201ENST00000035307 PTPN20Q4JDL3 420 aa12.49□□□□□ -0.41
CHPF2-201ENST00000035307 FASTKD1Q53R41 847 aaKnown RBP12.49□□□□□ -0.41
CHPF2-201ENST00000035307 OVOS1Q6IE37 1185 aa12.49□□□□□ -0.41
CHPF2-201ENST00000035307 ZNF410Q86VK4 478 aa12.49□□□□□ -0.41
CHPF2-201ENST00000035307 ZNF296Q8WUU4 475 aaPredicted RBP12.49□□□□□ -0.41
CHPF2-201ENST00000035307 MYCBPQ99417 103 aaPredicted RBP12.49□□□□□ -0.41
CHPF2-201ENST00000035307 WDR35Q9P2L0 1181 aa12.49□□□□□ -0.41
CHPF2-201ENST00000035307 H3BRJ5 948 aa12.49□□□□□ -0.41
CHPF2-201ENST00000035307 PMPCBO75439 489 aa12.49□□□□□ -0.41
CHPF2-201ENST00000035307 FECHP22830 423 aa12.49□□□□□ -0.41
CHPF2-201ENST00000035307 AMPD1P23109 780 aa12.49□□□□□ -0.41
CHPF2-201ENST00000035307 ADRA1DP25100 572 aa12.49□□□□□ -0.41
CHPF2-201ENST00000035307 CYP2C18P33260 490 aa12.49□□□□□ -0.41
CHPF2-201ENST00000035307 ALDH7A1P49419 539 aaKnown RBP12.49□□□□□ -0.41
CHPF2-201ENST00000035307 TAP1Q03518 808 aa12.49□□□□□ -0.41
CHPF2-201ENST00000035307 MCL1Q07820 350 aa12.49□□□□□ -0.41
CHPF2-201ENST00000035307 FASTKD3Q14CZ7 662 aaKnown RBP12.49□□□□□ -0.41
CHPF2-201ENST00000035307 TARBP2Q15633 366 aaKnown RBP12.49□□□□□ -0.41
CHPF2-201ENST00000035307 TSHZ1Q6ZSZ6 1077 aa12.49□□□□□ -0.41
CHPF2-201ENST00000035307 SLC25A41Q8N5S1 370 aa12.49□□□□□ -0.41
CHPF2-201ENST00000035307 IPMKQ8NFU5 416 aa12.49□□□□□ -0.41
CHPF2-201ENST00000035307 PIP4K2CQ8TBX8 421 aa12.49□□□□□ -0.41
CHPF2-201ENST00000035307 SPOCK2Q92563 424 aa12.49□□□□□ -0.41
CHPF2-201ENST00000035307 FGD4Q96M96 766 aa12.49□□□□□ -0.41
CHPF2-201ENST00000035307 ZMAT2Q96NC0 199 aaKnown RBP12.49□□□□□ -0.41
CHPF2-201ENST00000035307 SERPINB12Q96P63 405 aa12.49□□□□□ -0.41
CHPF2-201ENST00000035307 FZD8Q9H461 694 aa12.49□□□□□ -0.41
CHPF2-201ENST00000035307 AGO3Q9H9G7 860 aaKnown RBP12.49□□□□□ -0.41
CHPF2-201ENST00000035307 ARMCX1Q9P291 453 aa12.49□□□□□ -0.41
CHPF2-201ENST00000035307 APOBEC2Q9Y235 224 aaKnown RBP12.49□□□□□ -0.41
CHPF2-201ENST00000035307 MYH9P35579 1960 aaKnown RBP12.49□□□□□ -0.41
CHPF2-201ENST00000035307 CBX6O95503 412 aa12.48□□□□□ -0.41
CHPF2-201ENST00000035307 MT-CO1P00395 513 aa12.48□□□□□ -0.41
CHPF2-201ENST00000035307 ACRP10323 421 aa12.48□□□□□ -0.41
CHPF2-201ENST00000035307 VDRP11473 427 aa12.48□□□□□ -0.41
CHPF2-201ENST00000035307 TPH1P17752 444 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms