RNA–Protein interactions for RNA: ENSMUST00000109543.8

Vcan-201, Transcript of Versican core protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vcan, Length 2,321 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vcan-201ENSMUST00000109543 Prr18Q6PAN7 307 aa16.13■□□□□ 0.17
Vcan-201ENSMUST00000109543 Ssxb5Q6XAS2 159 aa16.13■□□□□ 0.17
Vcan-201ENSMUST00000109543 Colgalt1Q8K297 617 aa16.13■□□□□ 0.17
Vcan-201ENSMUST00000109543 Gsto2Q8K2Q2 248 aa16.13■□□□□ 0.17
Vcan-201ENSMUST00000109543 Mkl1Q8K4J6 964 aa16.13■□□□□ 0.17
Vcan-201ENSMUST00000109543 Smg8Q8VE18 991 aa16.13■□□□□ 0.17
Vcan-201ENSMUST00000109543 Setd6Q9CWY3 473 aa16.13■□□□□ 0.17
Vcan-201ENSMUST00000109543 PmpcbQ9CXT8 489 aa16.13■□□□□ 0.17
Vcan-201ENSMUST00000109543 Dcp2Q9CYC6 422 aa16.13■□□□□ 0.17
Vcan-201ENSMUST00000109543 Extl1Q9JKV7 669 aa16.13■□□□□ 0.17
Vcan-201ENSMUST00000109543 Ccdc13D3YV10 709 aa16.12■□□□□ 0.17
Vcan-201ENSMUST00000109543 Pdcd2P46718 343 aa16.12■□□□□ 0.17
Vcan-201ENSMUST00000109543 Elf1Q60775 612 aa16.12■□□□□ 0.17
Vcan-201ENSMUST00000109543 Ripor1Q68FE6 1223 aa16.12■□□□□ 0.17
Vcan-201ENSMUST00000109543 Znf219Q6IQX8 726 aa16.12■□□□□ 0.17
Vcan-201ENSMUST00000109543 Jade1Q6ZPI0 834 aaKnown RBP16.12■□□□□ 0.17
Vcan-201ENSMUST00000109543 Stambpl1Q76N33 436 aa16.12■□□□□ 0.17
Vcan-201ENSMUST00000109543 Reps2Q80XA6 521 aa16.12■□□□□ 0.17
Vcan-201ENSMUST00000109543 Zfp454Q80Y34 536 aa16.12■□□□□ 0.17
Vcan-201ENSMUST00000109543 Ccdc50Q810U5 305 aaKnown RBP16.12■□□□□ 0.17
Vcan-201ENSMUST00000109543 Q8CCC3 530 aa16.12■□□□□ 0.17
Vcan-201ENSMUST00000109543 Unc45bQ8CGY6 931 aaKnown RBP16.12■□□□□ 0.17
Vcan-201ENSMUST00000109543 Fam151aQ8QZW3 608 aa16.12■□□□□ 0.17
Vcan-201ENSMUST00000109543 FdpsQ920E5 353 aa16.12■□□□□ 0.17
Vcan-201ENSMUST00000109543 NamptQ99KQ4 491 aa16.12■□□□□ 0.17
Vcan-201ENSMUST00000109543 Cacng4Q9JJV4 327 aa16.12■□□□□ 0.17
Vcan-201ENSMUST00000109543 Rpl9-ps1S4R1R7 191 aa16.12■□□□□ 0.17
Vcan-201ENSMUST00000109543 Tex13c2A0A0G2JGA3 530 aa16.12■□□□□ 0.17
Vcan-201ENSMUST00000109543 DgkdE9PUQ8 1220 aa16.12■□□□□ 0.17
Vcan-201ENSMUST00000109543 Trim5E9PV98 497 aa16.12■□□□□ 0.17
Vcan-201ENSMUST00000109543 Zfp850J3QPC5 689 aa16.12■□□□□ 0.17
Vcan-201ENSMUST00000109543 Spin2fJ3QPU0 254 aa16.12■□□□□ 0.17
Vcan-201ENSMUST00000109543 Adam19O35674 920 aa16.12■□□□□ 0.17
Vcan-201ENSMUST00000109543 Vmn2r1O70410 912 aa16.12■□□□□ 0.17
Vcan-201ENSMUST00000109543 Icam1P13597 537 aaKnown RBP16.12■□□□□ 0.17
Vcan-201ENSMUST00000109543 Fmo3P97501 534 aa16.12■□□□□ 0.17
Vcan-201ENSMUST00000109543 Gbp1Q01514 589 aa16.12■□□□□ 0.17
Vcan-201ENSMUST00000109543 Ptcd3Q14C51 685 aaKnown RBP16.12■□□□□ 0.17
Vcan-201ENSMUST00000109543 Gpr162Q3UN16 588 aa16.12■□□□□ 0.17
Vcan-201ENSMUST00000109543 Nab1Q61122 486 aa16.12■□□□□ 0.17
Vcan-201ENSMUST00000109543 Has1Q61647 583 aa16.12■□□□□ 0.17
Vcan-201ENSMUST00000109543 Tpp2Q64514 1262 aa16.12■□□□□ 0.17
Vcan-201ENSMUST00000109543 Znf512Q69Z99 562 aa16.12■□□□□ 0.17
Vcan-201ENSMUST00000109543 Klhl29Q80T74 875 aa16.12■□□□□ 0.17
Vcan-201ENSMUST00000109543 Zdhhc19Q810M5 347 aa16.12■□□□□ 0.17
Vcan-201ENSMUST00000109543 Frmd4aQ8BIE6 1020 aa16.12■□□□□ 0.17
Vcan-201ENSMUST00000109543 EmsyQ8BMB0 1264 aaKnown RBP16.12■□□□□ 0.17
Vcan-201ENSMUST00000109543 Lrrc19Q8BZT5 364 aa16.12■□□□□ 0.17
Vcan-201ENSMUST00000109543 Inpp5fQ8CDA1 1132 aa16.12■□□□□ 0.17
Vcan-201ENSMUST00000109543 Lars2Q8VDC0 902 aa16.12■□□□□ 0.17
Vcan-201ENSMUST00000109543 Olfr30Q8VGD8 315 aa16.12■□□□□ 0.17
Vcan-201ENSMUST00000109543 Pex6Q99LC9 981 aa16.12■□□□□ 0.17
Vcan-201ENSMUST00000109543 Krt20Q9D312 431 aa16.12■□□□□ 0.17
Vcan-201ENSMUST00000109543 ParvbQ9ES46 365 aa16.12■□□□□ 0.17
Vcan-201ENSMUST00000109543 Copg2Q9QXK3 871 aa16.12■□□□□ 0.17
Vcan-201ENSMUST00000109543 Ripk3Q9QZL0 486 aa16.12■□□□□ 0.17
Vcan-201ENSMUST00000109543 Daw1D3Z7A5 415 aa16.11■□□□□ 0.17
Vcan-201ENSMUST00000109543 Vmn2r104E9Q2J5 860 aa16.11■□□□□ 0.17
Vcan-201ENSMUST00000109543 Mup13L7N222 235 aa16.11■□□□□ 0.17
Vcan-201ENSMUST00000109543 Ctnnal1O88327 731 aa16.11■□□□□ 0.17
Vcan-201ENSMUST00000109543 Btg3P50615 252 aa16.11■□□□□ 0.17
Vcan-201ENSMUST00000109543 Ppp1r13lQ5I1X5 824 aa16.11■□□□□ 0.17
Vcan-201ENSMUST00000109543 Sp140Q6NSQ5 534 aa16.11■□□□□ 0.17
Vcan-201ENSMUST00000109543 PygbQ8CI94 843 aaKnown RBP16.11■□□□□ 0.17
Vcan-201ENSMUST00000109543 Fam114a2Q8VE88 497 aa16.11■□□□□ 0.17
Vcan-201ENSMUST00000109543 Lrp8Q924X6 996 aa16.11■□□□□ 0.17
Vcan-201ENSMUST00000109543 Ogfod2Q9CQ04 349 aa16.11■□□□□ 0.17
Vcan-201ENSMUST00000109543 Tm9sf1Q9DBU0 606 aa16.11■□□□□ 0.17
Vcan-201ENSMUST00000109543 Rsc1a1Q9ER99 582 aa16.11■□□□□ 0.17
Vcan-201ENSMUST00000109543 Ccdc86Q9JJ89 426 aa16.11■□□□□ 0.17
Vcan-201ENSMUST00000109543 Pdcd7Q9WTY1 482 aa16.11■□□□□ 0.17
Vcan-201ENSMUST00000109543 Aldh18a1Q9Z110 795 aa16.11■□□□□ 0.17
Vcan-201ENSMUST00000109543 Pcdh7A0A0A6YY83 1255 aa16.11■□□□□ 0.17
Vcan-201ENSMUST00000109543 Sh3pxd2bA2AAY5 908 aa16.11■□□□□ 0.17
Vcan-201ENSMUST00000109543 Abhd12bG3UZN6 359 aa16.11■□□□□ 0.17
Vcan-201ENSMUST00000109543 Pold2O35654 469 aa16.11■□□□□ 0.17
Vcan-201ENSMUST00000109543 NoctO35710 429 aa16.11■□□□□ 0.17
Vcan-201ENSMUST00000109543 NfkbieO54910 364 aa16.11■□□□□ 0.17
Vcan-201ENSMUST00000109543 E2f6O54917 272 aa16.11■□□□□ 0.17
Vcan-201ENSMUST00000109543 PigrO70570 771 aa16.11■□□□□ 0.17
Vcan-201ENSMUST00000109543 Psma2P49722 234 aa16.11■□□□□ 0.17
Vcan-201ENSMUST00000109543 Pcsk1P63239 753 aa16.11■□□□□ 0.17
Vcan-201ENSMUST00000109543 Ano7Q14AT5 859 aa16.11■□□□□ 0.17
Vcan-201ENSMUST00000109543 Pdss1Q33DR2 409 aa16.11■□□□□ 0.17
Vcan-201ENSMUST00000109543 Slc5a10Q5SWY8 596 aa16.11■□□□□ 0.17
Vcan-201ENSMUST00000109543 Xpo1Q6P5F9 1071 aaKnown RBP16.11■□□□□ 0.17
Vcan-201ENSMUST00000109543 Trpm4Q7TN37 1213 aa16.11■□□□□ 0.17
Vcan-201ENSMUST00000109543 Ccdc159Q8C963 411 aa16.11■□□□□ 0.17
Vcan-201ENSMUST00000109543 Znf276Q8CE64 614 aa16.11■□□□□ 0.17
Vcan-201ENSMUST00000109543 Cdk9Q99J95 372 aa16.11■□□□□ 0.17
Vcan-201ENSMUST00000109543 NonoQ99K48 473 aaKnown RBP16.11■□□□□ 0.17
Vcan-201ENSMUST00000109543 HgsQ99LI8 775 aa16.11■□□□□ 0.17
Vcan-201ENSMUST00000109543 Nudt8Q9CR24 210 aa16.11■□□□□ 0.17
Vcan-201ENSMUST00000109543 Dcaf6Q9DC22 876 aa16.11■□□□□ 0.17
Vcan-201ENSMUST00000109543 Mpp5Q9JLB2 675 aa16.11■□□□□ 0.17
Vcan-201ENSMUST00000109543 QkiQ9QYS9 341 aaKnown RBP16.11■□□□□ 0.17
Vcan-201ENSMUST00000109543 Noc2lQ9WV70 747 aaKnown RBP16.11■□□□□ 0.17
Vcan-201ENSMUST00000109543 Lilra5D3Z7A9 295 aa16.1■□□□□ 0.17
Vcan-201ENSMUST00000109543 Mcm9Q2KHI9 1134 aa16.1■□□□□ 0.17
Vcan-201ENSMUST00000109543 Sult1d1Q3UZZ6 295 aa16.1■□□□□ 0.17
Retrieved 100 of 22,080 RNA–protein pairs in 77.2 ms