RNA–Protein interactions for RNA: ENSMUST00000056508.11

Clcn3-202, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Clcn3, Length 5,684 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-202ENSMUST00000056508 Gucy2cQ3UWA6 1072 aa9.23□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Cdkn2cQ60772 168 aa9.23□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Dyrk1aQ61214 763 aa9.23□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Tll1Q62381 1013 aa9.23□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Psd2Q6P1I6 770 aa9.23□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Snx31Q6P8Y7 439 aa9.23□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Tmem132cQ8CEF9 1099 aa9.23□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Mark4Q8CIP4 752 aa9.23□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Cpa5Q8R4H4 436 aa9.23□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Klrb1fQ8VD98 217 aa9.23□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Olfr801Q8VEU1 318 aa9.23□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Pdk3Q922H2 415 aaKnown RBP9.23□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Jmjd6Q9ERI5 403 aa9.23□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Gm12394A2AKP6 982 aa9.23□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Zfp780bE9Q2S6 806 aa9.23□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Cd63P41731 238 aa9.23□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Gpatch4Q3TFK5 415 aaKnown RBP9.23□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Kansl1lQ5DTI6 991 aa9.23□□□□□ -0.93
Clcn3-202ENSMUST00000056508 CcnhQ61458 323 aa9.23□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Gpbar1Q80SS6 329 aa9.23□□□□□ -0.93
Clcn3-202ENSMUST00000056508 SybuQ8BHS8 665 aa9.23□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Slc9a9Q8BZ00 644 aa9.23□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Tada2aQ8CHV6 443 aa9.23□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Olfr811Q8VFI1 319 aa9.23□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Pcdha3Q91Y16 942 aa9.23□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Ppp2r2dQ925E7 453 aa9.23□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Gpr37Q9QY42 600 aa9.23□□□□□ -0.93
Clcn3-202ENSMUST00000056508 March7Q9WV66 693 aa9.23□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Ate1Q9Z2A5 516 aa9.23□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Kcnk7Q9Z2T1 307 aa9.23□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Pck1Q9Z2V4 622 aa9.23□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Btnl6A2CG22 539 aa9.23□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Kcna10B2RQA1 511 aa9.23□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Reps1O54916 795 aa9.23□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Abcg1Q64343 666 aa9.23□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Q80VP5 184 aa9.23□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Tgm6Q8BM11 706 aa9.23□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Zcchc18Q8VD24 393 aa9.23□□□□□ -0.93
Clcn3-202ENSMUST00000056508 DgkgQ91WG7 788 aa9.23□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Tmem206Q9D771 350 aa9.23□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Apol11aE9PZG0 334 aa9.22□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Psmc3ipO35047 217 aa9.22□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Slc1a6O35544 561 aa9.22□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Slc16a2O70324 545 aa9.22□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Nploc4P60670 608 aa9.22□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Pfkfb4Q6DTY7 469 aa9.22□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Olfr1080Q7TR67 313 aa9.22□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Prkd3Q8K1Y2 889 aa9.22□□□□□ -0.93
Clcn3-202ENSMUST00000056508 MgarpQ8VI64 283 aa9.22□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Mrpl1Q99N96 336 aaKnown RBP9.22□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Krt88Q9CPR6 171 aa9.22□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Use1Q9CQ56 270 aa9.22□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Actl7bQ9QY83 418 aa9.22□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Slfn8B1ARD8 910 aa9.22□□□□□ -0.93
Clcn3-202ENSMUST00000056508 MttpO08601 894 aa9.22□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Hmgb3O54879 200 aaKnown RBP9.22□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Capns1O88456 269 aa9.22□□□□□ -0.93
Clcn3-202ENSMUST00000056508 NadkP58058 439 aa9.22□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Tmem237Q3V0J1 427 aa9.22□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Usp50Q6P8X6 390 aa9.22□□□□□ -0.93
Clcn3-202ENSMUST00000056508 PrcpQ7TMR0 491 aa9.22□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Olfr1037Q7TR84 321 aa9.22□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Ubap2lQ80X50 1107 aaKnown RBP9.22□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Gpr157Q8C206 330 aa9.22□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Ddx50Q99MJ9 734 aaKnown RBP9.22□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Padi4Q9Z183 666 aa9.22□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Gm3893E9Q1I1 302 aa9.22□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Smlr1J3QMJ4 66 aa9.22□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Dpy19l2P0CW70 773 aa9.22□□□□□ -0.93
Clcn3-202ENSMUST00000056508 PnpP23492 289 aa9.22□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Stx1bP61264 288 aa9.22□□□□□ -0.93
Clcn3-202ENSMUST00000056508 CebpdQ00322 268 aa9.22□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Adamts18Q4VC17 1219 aa9.22□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Spire1Q52KF3 598 aa9.22□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Cand1Q6ZQ38 1230 aa9.22□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Haus1Q8BHX1 278 aa9.22□□□□□ -0.93
Clcn3-202ENSMUST00000056508 B3galnt1Q920V1 331 aa9.22□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Ist1Q9CX00 362 aa9.22□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Med7Q9CZB6 233 aa9.22□□□□□ -0.93
Clcn3-202ENSMUST00000056508 RnmtQ9D0L8 465 aaKnown RBP9.22□□□□□ -0.93
Clcn3-202ENSMUST00000056508 GatmQ9D964 423 aaKnown RBP9.22□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Fam217aQ9D9W6 419 aa9.22□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Atp13a1Q9EPE9 1200 aaKnown RBP9.22□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Gm5565A0A0G2JGB2 317 aa9.22□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Gm3618D3Z4P5 127 aa9.22□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Frg1P97376 258 aaKnown RBP9.22□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Csn1s2aQ02862 184 aa9.22□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Kiaa0319Q5SZV5 1081 aa9.22□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Pwwp2aQ69Z61 730 aa9.22□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Nrg1Q6DR99 700 aa9.22□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Ubxn7Q6P5G6 467 aa9.22□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Abraxas1Q8BPZ8 407 aa9.22□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Trim13Q9CYB0 407 aa9.22□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Arl13aQ9D416 372 aa9.22□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Cd79bP15530 228 aa9.22□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Rps2P25444 293 aaKnown RBP9.22□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Sult2a2P50236 285 aa9.22□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Mybl1P51960 751 aa9.22□□□□□ -0.93
Clcn3-202ENSMUST00000056508 P3h1Q3V1T4 739 aa9.22□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Agap1Q8BXK8 857 aaKnown RBP9.22□□□□□ -0.93
Retrieved 100 of 22,080 RNA–protein pairs in 18.3 ms