RNA–Protein interactions for RNA: ENSMUST00000042717.12

Trim39-201, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,085 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-201ENSMUST00000042717 DmwdQ08274 665 aa9.06□□□□□ -0.96
Trim39-201ENSMUST00000042717 Zmym1Q3TJB1 983 aa9.06□□□□□ -0.96
Trim39-201ENSMUST00000042717 Gm428Q3UTE2 360 aa9.06□□□□□ -0.96
Trim39-201ENSMUST00000042717 Dpysl3Q62188 570 aa9.06□□□□□ -0.96
Trim39-201ENSMUST00000042717 Bicd1Q8BR07 835 aa9.06□□□□□ -0.96
Trim39-201ENSMUST00000042717 Enpp4Q8BTJ4 456 aa9.06□□□□□ -0.96
Trim39-201ENSMUST00000042717 Fam163bQ8BUM6 167 aa9.06□□□□□ -0.96
Trim39-201ENSMUST00000042717 SgczQ8BX51 311 aa9.06□□□□□ -0.96
Trim39-201ENSMUST00000042717 Oas1gQ8K469 367 aa9.06□□□□□ -0.96
Trim39-201ENSMUST00000042717 SarafQ8R3Q0 334 aa9.06□□□□□ -0.96
Trim39-201ENSMUST00000042717 DutQ8VCG1 200 aaKnown RBP9.06□□□□□ -0.96
Trim39-201ENSMUST00000042717 Sytl2Q99N50 950 aa9.06□□□□□ -0.96
Trim39-201ENSMUST00000042717 ArpinQ9D0A3 226 aa9.06□□□□□ -0.96
Trim39-201ENSMUST00000042717 Syf2Q9D198 242 aaKnown RBP9.06□□□□□ -0.96
Trim39-201ENSMUST00000042717 Kif12Q9D2Z8 642 aa9.06□□□□□ -0.96
Trim39-201ENSMUST00000042717 Pak1ip1Q9DCE5 382 aaKnown RBP9.06□□□□□ -0.96
Trim39-201ENSMUST00000042717 Olfr711Q9EPG2 314 aa9.06□□□□□ -0.96
Trim39-201ENSMUST00000042717 Edf1Q9JMG1 148 aaKnown RBP9.06□□□□□ -0.96
Trim39-201ENSMUST00000042717 Acox2Q9QXD1 681 aa9.06□□□□□ -0.96
Trim39-201ENSMUST00000042717 Adgrf2E9Q4J9 644 aa9.05□□□□□ -0.96
Trim39-201ENSMUST00000042717 Zfpm1O35615 995 aa9.05□□□□□ -0.96
Trim39-201ENSMUST00000042717 Pim1P06803 397 aa9.05□□□□□ -0.96
Trim39-201ENSMUST00000042717 PrlP06879 226 aa9.05□□□□□ -0.96
Trim39-201ENSMUST00000042717 AmhP27106 555 aa9.05□□□□□ -0.96
Trim39-201ENSMUST00000042717 Ca8P28651 291 aa9.05□□□□□ -0.96
Trim39-201ENSMUST00000042717 Atp8a1P70704 1164 aa9.05□□□□□ -0.96
Trim39-201ENSMUST00000042717 Elf3Q3UPW2 391 aa9.05□□□□□ -0.96
Trim39-201ENSMUST00000042717 Gm10488Q4KL05 212 aa9.05□□□□□ -0.96
Trim39-201ENSMUST00000042717 Nr2c1Q505F1 590 aa9.05□□□□□ -0.96
Trim39-201ENSMUST00000042717 Ccdc92bQ5SUE3 299 aa9.05□□□□□ -0.96
Trim39-201ENSMUST00000042717 Ksr1Q61097 873 aa9.05□□□□□ -0.96
Trim39-201ENSMUST00000042717 Ccdc57Q6PHN1 1016 aa9.05□□□□□ -0.96
Trim39-201ENSMUST00000042717 Rps6ka6Q7TPS0 764 aa9.05□□□□□ -0.96
Trim39-201ENSMUST00000042717 Armc12Q80X86 340 aa9.05□□□□□ -0.96
Trim39-201ENSMUST00000042717 Fut11Q8BHC9 489 aa9.05□□□□□ -0.96
Trim39-201ENSMUST00000042717 Ctxn3Q8BXZ0 80 aa9.05□□□□□ -0.96
Trim39-201ENSMUST00000042717 Prr33Q8C494 260 aa9.05□□□□□ -0.96
Trim39-201ENSMUST00000042717 Syn3Q8JZP2 579 aa9.05□□□□□ -0.96
Trim39-201ENSMUST00000042717 Angel1Q8VCU0 667 aa9.05□□□□□ -0.96
Trim39-201ENSMUST00000042717 Olfr345Q8VGK4 311 aa9.05□□□□□ -0.96
Trim39-201ENSMUST00000042717 Gimap4Q99JY3 219 aa9.05□□□□□ -0.96
Trim39-201ENSMUST00000042717 AticQ9CWJ9 592 aaKnown RBP9.05□□□□□ -0.96
Trim39-201ENSMUST00000042717 Sgf29Q9DA08 293 aaKnown RBP9.05□□□□□ -0.96
Trim39-201ENSMUST00000042717 Ppp2r3dQ9Z176 491 aa9.05□□□□□ -0.96
Trim39-201ENSMUST00000042717 Mapk13Q9Z1B7 366 aa9.05□□□□□ -0.96
Trim39-201ENSMUST00000042717 Zkscan5Q9Z1D8 819 aa9.05□□□□□ -0.96
Trim39-201ENSMUST00000042717 Vmn2r84D3YWE3 849 aa9.05□□□□□ -0.96
Trim39-201ENSMUST00000042717 Lonrf1D3YY23 762 aa9.05□□□□□ -0.96
Trim39-201ENSMUST00000042717 Ptpn9O35239 593 aa9.05□□□□□ -0.96
Trim39-201ENSMUST00000042717 Ap2a2P17427 938 aaKnown RBP9.05□□□□□ -0.96
Trim39-201ENSMUST00000042717 Eif3eP60229 445 aaKnown RBP9.05□□□□□ -0.96
Trim39-201ENSMUST00000042717 Cdo1P60334 200 aa9.05□□□□□ -0.96
Trim39-201ENSMUST00000042717 YwhagP61982 247 aaKnown RBP9.05□□□□□ -0.96
Trim39-201ENSMUST00000042717 Tubb5P99024 444 aaKnown RBP9.05□□□□□ -0.96
Trim39-201ENSMUST00000042717 Rplp2P99027 115 aaKnown RBP9.05□□□□□ -0.96
Trim39-201ENSMUST00000042717 CkbQ04447 381 aa9.05□□□□□ -0.96
Trim39-201ENSMUST00000042717 Fam171bQ14CH0 825 aa9.05□□□□□ -0.96
Trim39-201ENSMUST00000042717 Znf746Q3U133 652 aa9.05□□□□□ -0.96
Trim39-201ENSMUST00000042717 Tmem237Q3V0J1 427 aa9.05□□□□□ -0.96
Trim39-201ENSMUST00000042717 GstcdQ5RL51 634 aa9.05□□□□□ -0.96
Trim39-201ENSMUST00000042717 SkiQ60698 725 aa9.05□□□□□ -0.96
Trim39-201ENSMUST00000042717 PtprjQ64455 1238 aa9.05□□□□□ -0.96
Trim39-201ENSMUST00000042717 Mib1Q80SY4 1006 aa9.05□□□□□ -0.96
Trim39-201ENSMUST00000042717 Trpa1Q8BLA8 1125 aa9.05□□□□□ -0.96
Trim39-201ENSMUST00000042717 HhatQ8BMT9 499 aa9.05□□□□□ -0.96
Trim39-201ENSMUST00000042717 Ttc22Q8C159 568 aa9.05□□□□□ -0.96
Trim39-201ENSMUST00000042717 Slc35f5Q8R314 524 aa9.05□□□□□ -0.96
Trim39-201ENSMUST00000042717 Znf622Q91VY9 476 aa9.05□□□□□ -0.96
Trim39-201ENSMUST00000042717 Erlin1Q91X78 346 aa9.05□□□□□ -0.96
Trim39-201ENSMUST00000042717 DeraQ91YP3 318 aa9.05□□□□□ -0.96
Trim39-201ENSMUST00000042717 Cdk5rap3Q99LM2 503 aa9.05□□□□□ -0.96
Trim39-201ENSMUST00000042717 Ly6kQ9CWP4 154 aa9.05□□□□□ -0.96
Trim39-201ENSMUST00000042717 Krt20Q9D312 431 aa9.05□□□□□ -0.96
Trim39-201ENSMUST00000042717 Eef1akmt2Q9D853 244 aa9.05□□□□□ -0.96
Trim39-201ENSMUST00000042717 Ecel1Q9JMI0 775 aa9.05□□□□□ -0.96
Trim39-201ENSMUST00000042717 PignQ9R1S3 931 aa9.05□□□□□ -0.96
Trim39-201ENSMUST00000042717 Bmp15Q9Z0L4 392 aa9.05□□□□□ -0.96
Trim39-201ENSMUST00000042717 Myo7aP97479 2215 aa9.05□□□□□ -0.96
Trim39-201ENSMUST00000042717 Igkv18-36A0A075B5M9 114 aa9.04□□□□□ -0.96
Trim39-201ENSMUST00000042717 Wdr95D3Z7A8 784 aa9.04□□□□□ -0.96
Trim39-201ENSMUST00000042717 Cntnap3E9PY62 1287 aa9.04□□□□□ -0.96
Trim39-201ENSMUST00000042717 F6Y6L6 278 aa9.04□□□□□ -0.96
Trim39-201ENSMUST00000042717 Serpinb6bO08804 377 aa9.04□□□□□ -0.96
Trim39-201ENSMUST00000042717 Soat2O88908 525 aa9.04□□□□□ -0.96
Trim39-201ENSMUST00000042717 LgmnO89017 435 aa9.04□□□□□ -0.96
Trim39-201ENSMUST00000042717 Atf2P16951 487 aaKnown RBP9.04□□□□□ -0.96
Trim39-201ENSMUST00000042717 Lsp1P19973 330 aa9.04□□□□□ -0.96
Trim39-201ENSMUST00000042717 CtswP56203 371 aa9.04□□□□□ -0.96
Trim39-201ENSMUST00000042717 Lipo3Q3UT41 399 aa9.04□□□□□ -0.96
Trim39-201ENSMUST00000042717 Grm6Q5NCH9 871 aa9.04□□□□□ -0.96
Trim39-201ENSMUST00000042717 Ppp2r5eQ61151 467 aa9.04□□□□□ -0.96
Trim39-201ENSMUST00000042717 Krt12Q64291 487 aa9.04□□□□□ -0.96
Trim39-201ENSMUST00000042717 Cacna2d2Q6PHS9 1154 aa9.04□□□□□ -0.96
Trim39-201ENSMUST00000042717 Zswim6Q80TB7 1207 aa9.04□□□□□ -0.96
Trim39-201ENSMUST00000042717 ToporsQ80Z37 1033 aa9.04□□□□□ -0.96
Trim39-201ENSMUST00000042717 Best2Q8BGM5 508 aa9.04□□□□□ -0.96
Trim39-201ENSMUST00000042717 Snx14Q8BHY8 964 aa9.04□□□□□ -0.96
Trim39-201ENSMUST00000042717 FsbpQ8BKE5 299 aa9.04□□□□□ -0.96
Trim39-201ENSMUST00000042717 Csnk1g1Q8BTH8 459 aa9.04□□□□□ -0.96
Trim39-201ENSMUST00000042717 Hmgcll1Q8JZS7 343 aa9.04□□□□□ -0.96
Retrieved 100 of 22,080 RNA–protein pairs in 24.4 ms