RNA–Protein interactions for RNA: ENST00000641570.1

PHGDH-220, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,036 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-220ENST00000641570 CLIC5Q9NZA1 410 aa13.55□□□□□ -0.24
PHGDH-220ENST00000641570 COX16Q9P0S2 106 aa13.55□□□□□ -0.24
PHGDH-220ENST00000641570 SLC12A6Q9UHW9 1150 aa13.55□□□□□ -0.24
PHGDH-220ENST00000641570 GUCA1BQ9UMX6 200 aa13.55□□□□□ -0.24
PHGDH-220ENST00000641570 NCANO14594 1321 aa13.55□□□□□ -0.24
PHGDH-220ENST00000641570 CLUHO75153 1309 aa13.55□□□□□ -0.24
PHGDH-220ENST00000641570 TRIOBPQ9H2D6 2365 aa13.54□□□□□ -0.24
PHGDH-220ENST00000641570 A0A0A6YYK5 440 aaPredicted RBP13.54□□□□□ -0.24
PHGDH-220ENST00000641570 YJEFN3A6XGL0 299 aa13.54□□□□□ -0.24
PHGDH-220ENST00000641570 E7ENQ6 273 aa13.54□□□□□ -0.24
PHGDH-220ENST00000641570 SPOPO43791 374 aa13.54□□□□□ -0.24
PHGDH-220ENST00000641570 TLR5O60602 858 aa13.54□□□□□ -0.24
PHGDH-220ENST00000641570 MBL2P11226 248 aaPredicted RBP13.54□□□□□ -0.24
PHGDH-220ENST00000641570 PFKLP17858 780 aa13.54□□□□□ -0.24
PHGDH-220ENST00000641570 NOS2P35228 1153 aa13.54□□□□□ -0.24
PHGDH-220ENST00000641570 ATP5C1P36542 298 aaKnown RBP13.54□□□□□ -0.24
PHGDH-220ENST00000641570 MATKP42679 507 aa13.54□□□□□ -0.24
PHGDH-220ENST00000641570 RPL34P49207 117 aaKnown RBP13.54□□□□□ -0.24
PHGDH-220ENST00000641570 TUBP50607 506 aa13.54□□□□□ -0.24
PHGDH-220ENST00000641570 MAMLD1Q13495 774 aa13.54□□□□□ -0.24
PHGDH-220ENST00000641570 CLUL1Q15846 466 aa13.54□□□□□ -0.24
PHGDH-220ENST00000641570 HADHQ16836 314 aaKnown RBP13.54□□□□□ -0.24
PHGDH-220ENST00000641570 ARL13BQ3SXY8 428 aa13.54□□□□□ -0.24
PHGDH-220ENST00000641570 GPR158Q5T848 1215 aa13.54□□□□□ -0.24
PHGDH-220ENST00000641570 PLEKHA7Q6IQ23 1121 aa13.54□□□□□ -0.24
PHGDH-220ENST00000641570 GPR149Q86SP6 731 aa13.54□□□□□ -0.24
PHGDH-220ENST00000641570 DNAAF5Q86Y56 855 aa13.54□□□□□ -0.24
PHGDH-220ENST00000641570 SLC35G2Q8TBE7 412 aa13.54□□□□□ -0.24
PHGDH-220ENST00000641570 HLA-CQ95604 372 aa13.54□□□□□ -0.24
PHGDH-220ENST00000641570 ADAM7Q9H2U9 754 aa13.54□□□□□ -0.24
PHGDH-220ENST00000641570 TRMT1Q9NXH9 659 aaKnown RBP13.54□□□□□ -0.24
PHGDH-220ENST00000641570 TJP2Q9UDY2 1190 aa13.54□□□□□ -0.24
PHGDH-220ENST00000641570 DNMT3LQ9UJW3 386 aa13.54□□□□□ -0.24
PHGDH-220ENST00000641570 LSM7Q9UK45 103 aaKnown RBP13.54□□□□□ -0.24
PHGDH-220ENST00000641570 BUB1O43683 1085 aa13.53□□□□□ -0.24
PHGDH-220ENST00000641570 F9P00740 461 aa13.53□□□□□ -0.24
PHGDH-220ENST00000641570 APOEP02649 317 aa13.53□□□□□ -0.24
PHGDH-220ENST00000641570 SLC2A3P11169 496 aa13.53□□□□□ -0.24
PHGDH-220ENST00000641570 HMGA1P17096 107 aaKnown RBP13.53□□□□□ -0.24
PHGDH-220ENST00000641570 KCNA5P22460 613 aa13.53□□□□□ -0.24
PHGDH-220ENST00000641570 GBP2P32456 591 aaPredicted RBP13.53□□□□□ -0.24
PHGDH-220ENST00000641570 ARHGAP25P42331 645 aa13.53□□□□□ -0.24
PHGDH-220ENST00000641570 RBM10P98175 930 aaKnown RBP13.53□□□□□ -0.24
PHGDH-220ENST00000641570 CYP4F8P98187 520 aa13.53□□□□□ -0.24
PHGDH-220ENST00000641570 DEUP1Q05D60 604 aa13.53□□□□□ -0.24
PHGDH-220ENST00000641570 EFEMP1Q12805 493 aa13.53□□□□□ -0.24
PHGDH-220ENST00000641570 NME3Q13232 169 aa13.53□□□□□ -0.24
PHGDH-220ENST00000641570 PIGHQ14442 188 aaPredicted RBP13.53□□□□□ -0.24
PHGDH-220ENST00000641570 MESDQ14696 234 aa13.53□□□□□ -0.24
PHGDH-220ENST00000641570 CDO1Q16878 200 aa13.53□□□□□ -0.24
PHGDH-220ENST00000641570 DAAM2Q86T65 1068 aa13.53□□□□□ -0.24
PHGDH-220ENST00000641570 DDX42Q86XP3 938 aaKnown RBP eCLIP13.53□□□□□ -0.24
PHGDH-220ENST00000641570 MIB1Q86YT6 1006 aa13.53□□□□□ -0.24
PHGDH-220ENST00000641570 HS6ST3Q8IZP7 471 aa13.53□□□□□ -0.24
PHGDH-220ENST00000641570 DEFB106AQ8N104 65 aa13.53□□□□□ -0.24
PHGDH-220ENST00000641570 RXFP2Q8WXD0 754 aa13.53□□□□□ -0.24
PHGDH-220ENST00000641570 NDRG1Q92597 394 aaKnown RBP13.53□□□□□ -0.24
PHGDH-220ENST00000641570 ACSF2Q96CM8 615 aaPredicted RBP13.53□□□□□ -0.24
PHGDH-220ENST00000641570 UBE2ZQ9H832 354 aaPredicted RBP13.53□□□□□ -0.24
PHGDH-220ENST00000641570 HCFC1R1Q9NWW0 138 aa13.53□□□□□ -0.24
PHGDH-220ENST00000641570 DDIT4Q9NX09 232 aa13.53□□□□□ -0.24
PHGDH-220ENST00000641570 DNMT3BQ9UBC3 853 aaKnown RBP13.53□□□□□ -0.24
PHGDH-220ENST00000641570 COG5Q9UP83 839 aa13.53□□□□□ -0.24
PHGDH-220ENST00000641570 USTQ9Y2C2 406 aa13.53□□□□□ -0.24
PHGDH-220ENST00000641570 RANBP2P49792 3224 aaKnown RBP13.53□□□□□ -0.24
PHGDH-220ENST00000641570 FAM92AA1XBS5 289 aa13.52□□□□□ -0.25
PHGDH-220ENST00000641570 ZNF840PA6NDX5 716 aa13.52□□□□□ -0.25
PHGDH-220ENST00000641570 BTNL10A8MVZ5 291 aa13.52□□□□□ -0.25
PHGDH-220ENST00000641570 M0QYT0 321 aa13.52□□□□□ -0.25
PHGDH-220ENST00000641570 ZNF263O14978 683 aa13.52□□□□□ -0.25
PHGDH-220ENST00000641570 GLP2RO95838 553 aa13.52□□□□□ -0.25
PHGDH-220ENST00000641570 HDCP19113 662 aa13.52□□□□□ -0.25
PHGDH-220ENST00000641570 RDXP35241 583 aaKnown RBP13.52□□□□□ -0.25
PHGDH-220ENST00000641570 ZNF143P52747 638 aaPredicted RBP13.52□□□□□ -0.25
PHGDH-220ENST00000641570 ATP11AP98196 1134 aa13.52□□□□□ -0.25
PHGDH-220ENST00000641570 PTP4A2Q12974 167 aa13.52□□□□□ -0.25
PHGDH-220ENST00000641570 MTA1Q13330 715 aa13.52□□□□□ -0.25
PHGDH-220ENST00000641570 TEAD2Q15562 447 aa13.52□□□□□ -0.25
PHGDH-220ENST00000641570 SLC25A52Q3SY17 297 aa13.52□□□□□ -0.25
PHGDH-220ENST00000641570 SCYL2Q6P3W7 929 aa13.52□□□□□ -0.25
PHGDH-220ENST00000641570 BEND5Q7L4P6 421 aa13.52□□□□□ -0.25
PHGDH-220ENST00000641570 ARCQ7LC44 396 aa13.52□□□□□ -0.25
PHGDH-220ENST00000641570 RNF10Q8N5U6 811 aaKnown RBP13.52□□□□□ -0.25
PHGDH-220ENST00000641570 EMC1Q8N766 993 aa13.52□□□□□ -0.25
PHGDH-220ENST00000641570 MAB21L3Q8N8X9 362 aa13.52□□□□□ -0.25
PHGDH-220ENST00000641570 ARHGEF26Q96DR7 871 aa13.52□□□□□ -0.25
PHGDH-220ENST00000641570 GUCD1Q96NT3 240 aa13.52□□□□□ -0.25
PHGDH-220ENST00000641570 CNPY3Q9BT09 278 aa13.52□□□□□ -0.25
PHGDH-220ENST00000641570 TASP1Q9H6P5 420 aa13.52□□□□□ -0.25
PHGDH-220ENST00000641570 ZNF334Q9HCZ1 680 aaPredicted RBP13.52□□□□□ -0.25
PHGDH-220ENST00000641570 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.52□□□□□ -0.25
PHGDH-220ENST00000641570 MTMR10Q9NXD2 777 aa13.52□□□□□ -0.25
PHGDH-220ENST00000641570 IL37Q9NZH6 218 aa13.52□□□□□ -0.25
PHGDH-220ENST00000641570 MARCH2Q9P0N8 246 aa13.52□□□□□ -0.25
PHGDH-220ENST00000641570 NENFQ9UMX5 172 aa13.52□□□□□ -0.25
PHGDH-220ENST00000641570 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.52□□□□□ -0.25
PHGDH-220ENST00000641570 SH3BP1Q9Y3L3 701 aa13.52□□□□□ -0.25
PHGDH-220ENST00000641570 SLC12A8A0AV02 714 aa13.51□□□□□ -0.25
PHGDH-220ENST00000641570 SOBPA7XYQ1 873 aa13.51□□□□□ -0.25
PHGDH-220ENST00000641570 H3BQ06 376 aaPredicted RBP13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 154.7 ms