RNA–Protein interactions for RNA: ENST00000641375.1

PHGDH-216, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,196 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-216ENST00000641375 OAZ2O95190 189 aa17.13■□□□□ 0.33
PHGDH-216ENST00000641375 TFE3P19532 575 aaPredicted RBP17.13■□□□□ 0.33
PHGDH-216ENST00000641375 SULT1E1P49888 294 aa17.13■□□□□ 0.33
PHGDH-216ENST00000641375 DPYSL2Q16555 572 aa17.13■□□□□ 0.33
PHGDH-216ENST00000641375 LRIG3Q6UXM1 1119 aa17.13■□□□□ 0.33
PHGDH-216ENST00000641375 UBLCP1Q8WVY7 318 aaPredicted RBP17.13■□□□□ 0.33
PHGDH-216ENST00000641375 TXLNGYQ9BZA5 131 aa17.13■□□□□ 0.33
PHGDH-216ENST00000641375 CRISPLD2Q9H0B8 497 aa17.13■□□□□ 0.33
PHGDH-216ENST00000641375 PCDH18Q9HCL0 1135 aa17.13■□□□□ 0.33
PHGDH-216ENST00000641375 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.13■□□□□ 0.33
PHGDH-216ENST00000641375 DNAJB4Q9UDY4 337 aa17.13■□□□□ 0.33
PHGDH-216ENST00000641375 ATP8A1Q9Y2Q0 1164 aa17.13■□□□□ 0.33
PHGDH-216ENST00000641375 SCN5AQ14524 2016 aa17.13■□□□□ 0.33
PHGDH-216ENST00000641375 HHLA1C9JL84 531 aa17.13■□□□□ 0.33
PHGDH-216ENST00000641375 SYN3O14994 580 aa17.13■□□□□ 0.33
PHGDH-216ENST00000641375 ZBED1O96006 694 aa17.13■□□□□ 0.33
PHGDH-216ENST00000641375 CXCL10P02778 98 aa17.13■□□□□ 0.33
PHGDH-216ENST00000641375 BDNFP23560 247 aa17.13■□□□□ 0.33
PHGDH-216ENST00000641375 CACNA2D1P54289 1103 aa17.13■□□□□ 0.33
PHGDH-216ENST00000641375 TRIP13Q15645 432 aaPredicted RBP17.13■□□□□ 0.33
PHGDH-216ENST00000641375 C1orf53Q5VUE5 145 aa17.13■□□□□ 0.33
PHGDH-216ENST00000641375 PSTKQ8IV42 348 aaKnown RBP17.13■□□□□ 0.33
PHGDH-216ENST00000641375 PIK3R5Q8WYR1 880 aa17.13■□□□□ 0.33
PHGDH-216ENST00000641375 CASD1Q96PB1 797 aa17.13■□□□□ 0.33
PHGDH-216ENST00000641375 NPY6RQ99463 290 aa17.13■□□□□ 0.33
PHGDH-216ENST00000641375 MRPL9Q9BYD2 267 aaKnown RBP17.13■□□□□ 0.33
PHGDH-216ENST00000641375 TMEM30AQ9NV96 361 aa17.13■□□□□ 0.33
PHGDH-216ENST00000641375 PRG3Q9Y2Y8 225 aaPredicted RBP17.13■□□□□ 0.33
PHGDH-216ENST00000641375 CAPN9O14815 690 aa17.12■□□□□ 0.33
PHGDH-216ENST00000641375 MCF2LO15068 1137 aa17.12■□□□□ 0.33
PHGDH-216ENST00000641375 POLR3GO15318 223 aaPredicted RBP17.12■□□□□ 0.33
PHGDH-216ENST00000641375 CDR1P51861 262 aa17.12■□□□□ 0.33
PHGDH-216ENST00000641375 FAAP100Q0VG06 881 aa17.12■□□□□ 0.33
PHGDH-216ENST00000641375 MMRN1Q13201 1228 aa17.12■□□□□ 0.33
PHGDH-216ENST00000641375 ANKRD20A8PQ5CZ79 823 aa17.12■□□□□ 0.33
PHGDH-216ENST00000641375 ZC3H12AQ5D1E8 599 aaKnown RBP17.12■□□□□ 0.33
PHGDH-216ENST00000641375 LRRTM3Q86VH5 581 aa17.12■□□□□ 0.33
PHGDH-216ENST00000641375 SPATA2LQ8IUW3 424 aaPredicted RBP17.12■□□□□ 0.33
PHGDH-216ENST00000641375 SCML4Q8N228 414 aa17.12■□□□□ 0.33
PHGDH-216ENST00000641375 IRGQQ8WZA9 623 aa17.12■□□□□ 0.33
PHGDH-216ENST00000641375 NDRG1Q92597 394 aaKnown RBP17.12■□□□□ 0.33
PHGDH-216ENST00000641375 P3H4Q92791 437 aa17.12■□□□□ 0.33
PHGDH-216ENST00000641375 TMLHEQ9NVH6 421 aa17.12■□□□□ 0.33
PHGDH-216ENST00000641375 RRN3Q9NYV6 651 aa17.12■□□□□ 0.33
PHGDH-216ENST00000641375 AP4E1Q9UPM8 1137 aa17.12■□□□□ 0.33
PHGDH-216ENST00000641375 PLAAQ9Y263 795 aa17.12■□□□□ 0.33
PHGDH-216ENST00000641375 GOLGA8KD6RF30 607 aa17.12■□□□□ 0.33
PHGDH-216ENST00000641375 SGK1O00141 431 aa17.12■□□□□ 0.33
PHGDH-216ENST00000641375 RNF40O75150 1001 aa17.12■□□□□ 0.33
PHGDH-216ENST00000641375 ALDH2P05091 517 aa17.12■□□□□ 0.33
PHGDH-216ENST00000641375 TGM2P21980 687 aa17.12■□□□□ 0.33
PHGDH-216ENST00000641375 PMS2P54278 862 aa17.12■□□□□ 0.33
PHGDH-216ENST00000641375 UAP1Q16222 522 aaPredicted RBP17.12■□□□□ 0.33
PHGDH-216ENST00000641375 GPRIN1Q7Z2K8 1008 aa17.12■□□□□ 0.33
PHGDH-216ENST00000641375 BNIPLQ7Z465 357 aa17.12■□□□□ 0.33
PHGDH-216ENST00000641375 NPAS4Q8IUM7 802 aa17.12■□□□□ 0.33
PHGDH-216ENST00000641375 DCP1BQ8IZD4 617 aaKnown RBP17.12■□□□□ 0.33
PHGDH-216ENST00000641375 ZBTB9Q96C00 473 aa17.12■□□□□ 0.33
PHGDH-216ENST00000641375 SCLYQ96I15 445 aa17.12■□□□□ 0.33
PHGDH-216ENST00000641375 TMEM121Q9BTD3 319 aa17.12■□□□□ 0.33
PHGDH-216ENST00000641375 ADAM33Q9BZ11 813 aa17.12■□□□□ 0.33
PHGDH-216ENST00000641375 NRDE2Q9H7Z3 1164 aa17.12■□□□□ 0.33
PHGDH-216ENST00000641375 SAE1Q9UBE0 346 aaPredicted RBP17.12■□□□□ 0.33
PHGDH-216ENST00000641375 ANAPC5Q9UJX4 755 aa17.12■□□□□ 0.33
PHGDH-216ENST00000641375 ADAM28Q9UKQ2 775 aa17.12■□□□□ 0.33
PHGDH-216ENST00000641375 PATJQ8NI35 1801 aa17.11■□□□□ 0.33
PHGDH-216ENST00000641375 NRP1O14786 923 aa17.11■□□□□ 0.33
PHGDH-216ENST00000641375 LTFP02788 710 aa17.11■□□□□ 0.33
PHGDH-216ENST00000641375 USP17L7P0C7H9 530 aa17.11■□□□□ 0.33
PHGDH-216ENST00000641375 IL4RP24394 825 aa17.11■□□□□ 0.33
PHGDH-216ENST00000641375 L1CAMP32004 1257 aa17.11■□□□□ 0.33
PHGDH-216ENST00000641375 RDXP35241 583 aaKnown RBP17.11■□□□□ 0.33
PHGDH-216ENST00000641375 ITGA8P53708 1063 aa17.11■□□□□ 0.33
PHGDH-216ENST00000641375 PPP6R3Q5H9R7 873 aaPredicted RBP17.11■□□□□ 0.33
PHGDH-216ENST00000641375 PM20D1Q6GTS8 502 aa17.11■□□□□ 0.33
PHGDH-216ENST00000641375 CRIPAKQ8N1N5 446 aa17.11■□□□□ 0.33
PHGDH-216ENST00000641375 RIN2Q8WYP3 895 aaPredicted RBP17.11■□□□□ 0.33
PHGDH-216ENST00000641375 FAF2Q96CS3 445 aa17.11■□□□□ 0.33
PHGDH-216ENST00000641375 TMEM209Q96SK2 561 aa17.11■□□□□ 0.33
PHGDH-216ENST00000641375 TRIM62Q9BVG3 475 aa17.11■□□□□ 0.33
PHGDH-216ENST00000641375 COLEC11Q9BWP8 271 aa17.11■□□□□ 0.33
PHGDH-216ENST00000641375 RHOBTB2Q9BYZ6 727 aa17.11■□□□□ 0.33
PHGDH-216ENST00000641375 PABPC3Q9H361 631 aaKnown RBP17.11■□□□□ 0.33
PHGDH-216ENST00000641375 DHX35Q9H5Z1 703 aaKnown RBP17.11■□□□□ 0.33
PHGDH-216ENST00000641375 PCDH9Q9HC56 1237 aa17.11■□□□□ 0.33
PHGDH-216ENST00000641375 GPATCH2LQ9NWQ4 482 aa17.11■□□□□ 0.33
PHGDH-216ENST00000641375 YJEFN3A6XGL0 299 aa17.11■□□□□ 0.33
PHGDH-216ENST00000641375 E7ENQ6 273 aa17.11■□□□□ 0.33
PHGDH-216ENST00000641375 M0QYT0 321 aa17.11■□□□□ 0.33
PHGDH-216ENST00000641375 APOL1O14791 398 aa17.11■□□□□ 0.33
PHGDH-216ENST00000641375 TP73O15350 636 aa17.11■□□□□ 0.33
PHGDH-216ENST00000641375 RARGP13631 454 aa17.11■□□□□ 0.33
PHGDH-216ENST00000641375 VPS41P49754 854 aa17.11■□□□□ 0.33
PHGDH-216ENST00000641375 MNX1P50219 401 aaPredicted RBP17.11■□□□□ 0.33
PHGDH-216ENST00000641375 ATXN1P54253 815 aaKnown RBP17.11■□□□□ 0.33
PHGDH-216ENST00000641375 AIF1P55008 147 aa17.11■□□□□ 0.33
PHGDH-216ENST00000641375 CCL23P55773 120 aa17.11■□□□□ 0.33
PHGDH-216ENST00000641375 EIF3EP60228 445 aaKnown RBP17.11■□□□□ 0.33
PHGDH-216ENST00000641375 CA9Q16790 459 aa17.11■□□□□ 0.33
PHGDH-216ENST00000641375 SLC9A4Q6AI14 798 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms