RNA–Protein interactions for RNA: ENST00000641259.1

RBFOX1-224, Transcript of RNA binding fox-1 homolog 1, humanhuman

BASIC

Gene RBFOX1, Length 3,651 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-224ENST00000641259 CBWD6Q4V339 395 aa12.3□□□□□ -0.44
RBFOX1-224ENST00000641259 PABPC1LQ4VXU2 614 aaKnown RBP12.3□□□□□ -0.44
RBFOX1-224ENST00000641259 CBWD3Q5JTY5 395 aa12.3□□□□□ -0.44
RBFOX1-224ENST00000641259 CBWD5Q5RIA9 395 aa12.3□□□□□ -0.44
RBFOX1-224ENST00000641259 HAUS6Q7Z4H7 955 aa12.3□□□□□ -0.44
RBFOX1-224ENST00000641259 FAM186BQ8IYM0 893 aa12.3□□□□□ -0.44
RBFOX1-224ENST00000641259 ULK2Q8IYT8 1036 aa12.3□□□□□ -0.44
RBFOX1-224ENST00000641259 DDHD1Q8NEL9 900 aa12.3□□□□□ -0.44
RBFOX1-224ENST00000641259 RDM1Q8NG50 284 aa12.3□□□□□ -0.44
RBFOX1-224ENST00000641259 ZNF564Q8TBZ8 553 aaPredicted RBP12.3□□□□□ -0.44
RBFOX1-224ENST00000641259 C10orf88Q9H8K7 445 aa12.3□□□□□ -0.44
RBFOX1-224ENST00000641259 SIX2Q9NPC8 291 aa12.3□□□□□ -0.44
RBFOX1-224ENST00000641259 DDX56Q9NY93 547 aaKnown RBP12.3□□□□□ -0.44
RBFOX1-224ENST00000641259 THEGQ9P2T0 379 aa12.3□□□□□ -0.44
RBFOX1-224ENST00000641259 SLC17A7Q9P2U7 560 aa12.3□□□□□ -0.44
RBFOX1-224ENST00000641259 STARD13Q9Y3M8 1113 aa12.3□□□□□ -0.44
RBFOX1-224ENST00000641259 J3QRK9 145 aa12.3□□□□□ -0.44
RBFOX1-224ENST00000641259 PDHXO00330 501 aa12.3□□□□□ -0.44
RBFOX1-224ENST00000641259 RPL5P46777 297 aaKnown RBP12.3□□□□□ -0.44
RBFOX1-224ENST00000641259 OXCT1P55809 520 aa12.3□□□□□ -0.44
RBFOX1-224ENST00000641259 ESRRGP62508 458 aa12.3□□□□□ -0.44
RBFOX1-224ENST00000641259 CETN1Q12798 172 aa12.3□□□□□ -0.44
RBFOX1-224ENST00000641259 LDLRAP1Q5SW96 308 aa12.3□□□□□ -0.44
RBFOX1-224ENST00000641259 ENDOVQ8N8Q3 282 aaKnown RBP12.3□□□□□ -0.44
RBFOX1-224ENST00000641259 TMEM161BQ8NDZ6 487 aa12.3□□□□□ -0.44
RBFOX1-224ENST00000641259 PLEKHO2Q8TD55 490 aa12.3□□□□□ -0.44
RBFOX1-224ENST00000641259 COPS5Q92905 334 aa12.3□□□□□ -0.44
RBFOX1-224ENST00000641259 FBXL8Q96CD0 374 aa12.3□□□□□ -0.44
RBFOX1-224ENST00000641259 CYP26B1Q9NR63 512 aa12.3□□□□□ -0.44
RBFOX1-224ENST00000641259 PDGFCQ9NRA1 345 aa12.3□□□□□ -0.44
RBFOX1-224ENST00000641259 VPS51Q9UID3 782 aa12.3□□□□□ -0.44
RBFOX1-224ENST00000641259 MAFBQ9Y5Q3 323 aaPredicted RBP12.3□□□□□ -0.44
RBFOX1-224ENST00000641259 PLXNB2O15031 1838 aa12.29□□□□□ -0.44
RBFOX1-224ENST00000641259 SLC16A3O15427 465 aaKnown RBP12.29□□□□□ -0.44
RBFOX1-224ENST00000641259 PROCP04070 461 aa12.29□□□□□ -0.44
RBFOX1-224ENST00000641259 INHBAP08476 426 aa12.29□□□□□ -0.44
RBFOX1-224ENST00000641259 NR4A1P22736 598 aa12.29□□□□□ -0.44
RBFOX1-224ENST00000641259 EEF1B2P24534 225 aaKnown RBP12.29□□□□□ -0.44
RBFOX1-224ENST00000641259 ADSSP30520 456 aa12.29□□□□□ -0.44
RBFOX1-224ENST00000641259 SSTR1P30872 391 aa12.29□□□□□ -0.44
RBFOX1-224ENST00000641259 ETFBP38117 255 aa12.29□□□□□ -0.44
RBFOX1-224ENST00000641259 CCNG1P51959 295 aa12.29□□□□□ -0.44
RBFOX1-224ENST00000641259 AQP5P55064 265 aa12.29□□□□□ -0.44
RBFOX1-224ENST00000641259 GTF2BQ00403 316 aa12.29□□□□□ -0.44
RBFOX1-224ENST00000641259 PDE1BQ01064 536 aa12.29□□□□□ -0.44
RBFOX1-224ENST00000641259 STAT4Q14765 748 aa12.29□□□□□ -0.44
RBFOX1-224ENST00000641259 FASTKD3Q14CZ7 662 aaKnown RBP12.29□□□□□ -0.44
RBFOX1-224ENST00000641259 MAPK11Q15759 364 aa12.29□□□□□ -0.44
RBFOX1-224ENST00000641259 MTERF2Q49AM1 385 aa12.29□□□□□ -0.44
RBFOX1-224ENST00000641259 CDHR1Q96JP9 859 aa12.29□□□□□ -0.44
RBFOX1-224ENST00000641259 MMP19Q99542 508 aa12.29□□□□□ -0.44
RBFOX1-224ENST00000641259 PTPN18Q99952 460 aa12.29□□□□□ -0.44
RBFOX1-224ENST00000641259 ZNF395Q9H8N7 513 aaPredicted RBP12.29□□□□□ -0.44
RBFOX1-224ENST00000641259 INPP5FQ9Y2H2 1132 aa12.29□□□□□ -0.44
RBFOX1-224ENST00000641259 NEU2Q9Y3R4 380 aa12.29□□□□□ -0.44
RBFOX1-224ENST00000641259 UBE4BO95155 1302 aa12.29□□□□□ -0.44
RBFOX1-224ENST00000641259 C1orf232A0A0U1RR37 186 aa12.29□□□□□ -0.44
RBFOX1-224ENST00000641259 AIM2O14862 343 aa12.29□□□□□ -0.44
RBFOX1-224ENST00000641259 KRT75O95678 551 aa12.29□□□□□ -0.44
RBFOX1-224ENST00000641259 OSBPP22059 807 aa12.29□□□□□ -0.44
RBFOX1-224ENST00000641259 EFTUD2Q15029 972 aaKnown RBP eCLIP12.29□□□□□ -0.44
RBFOX1-224ENST00000641259 TRIM16LQ309B1 348 aa12.29□□□□□ -0.44
RBFOX1-224ENST00000641259 HSDL1Q3SXM5 330 aa12.29□□□□□ -0.44
RBFOX1-224ENST00000641259 SLC45A4Q5BKX6 768 aa12.29□□□□□ -0.44
RBFOX1-224ENST00000641259 C6orf52Q5T4I8 152 aa12.29□□□□□ -0.44
RBFOX1-224ENST00000641259 NXNQ6DKJ4 435 aa12.29□□□□□ -0.44
RBFOX1-224ENST00000641259 TAS1R3Q7RTX0 852 aa12.29□□□□□ -0.44
RBFOX1-224ENST00000641259 IRF2BP2Q7Z5L9 587 aa12.29□□□□□ -0.44
RBFOX1-224ENST00000641259 STKLD1Q8NE28 680 aa12.29□□□□□ -0.44
RBFOX1-224ENST00000641259 CAPSLQ8WWF8 208 aa12.29□□□□□ -0.44
RBFOX1-224ENST00000641259 FERMT1Q9BQL6 677 aa12.29□□□□□ -0.44
RBFOX1-224ENST00000641259 MECRQ9BV79 373 aa12.29□□□□□ -0.44
RBFOX1-224ENST00000641259 NUF2Q9BZD4 464 aa12.29□□□□□ -0.44
RBFOX1-224ENST00000641259 IL1RAPL1Q9NZN1 696 aa12.29□□□□□ -0.44
RBFOX1-224ENST00000641259 IGKV6D-21A0A0A0MT36 114 aa12.29□□□□□ -0.44
RBFOX1-224ENST00000641259 SORBS2O94875 1100 aaKnown RBP12.29□□□□□ -0.44
RBFOX1-224ENST00000641259 ETS1P14921 441 aa12.29□□□□□ -0.44
RBFOX1-224ENST00000641259 NAT1P18440 290 aa12.29□□□□□ -0.44
RBFOX1-224ENST00000641259 RRM1P23921 792 aa12.29□□□□□ -0.44
RBFOX1-224ENST00000641259 NFIL3Q16649 462 aa12.29□□□□□ -0.44
RBFOX1-224ENST00000641259 BSPRYQ5W0U4 402 aa12.29□□□□□ -0.44
RBFOX1-224ENST00000641259 OGFOD2Q6N063 350 aa12.29□□□□□ -0.44
RBFOX1-224ENST00000641259 SLC39A4Q6P5W5 647 aa12.29□□□□□ -0.44
RBFOX1-224ENST00000641259 DENND5BQ6ZUT9 1274 aa12.29□□□□□ -0.44
RBFOX1-224ENST00000641259 TUBB6Q9BUF5 446 aa12.29□□□□□ -0.44
RBFOX1-224ENST00000641259 SEMA6AQ9H2E6 1030 aa12.29□□□□□ -0.44
RBFOX1-224ENST00000641259 KIAA1586Q9HCI6 787 aa12.29□□□□□ -0.44
RBFOX1-224ENST00000641259 HBS1LQ9Y450 684 aaKnown RBP12.29□□□□□ -0.44
RBFOX1-224ENST00000641259 HTR3EA5X5Y0 456 aa12.28□□□□□ -0.44
RBFOX1-224ENST00000641259 APOEP02649 317 aa12.28□□□□□ -0.44
RBFOX1-224ENST00000641259 CDK4P11802 303 aa12.28□□□□□ -0.44
RBFOX1-224ENST00000641259 CHRNB2P17787 502 aa12.28□□□□□ -0.44
RBFOX1-224ENST00000641259 BASP1P80723 227 aaKnown RBP12.28□□□□□ -0.44
RBFOX1-224ENST00000641259 RALGPS1Q5JS13 557 aa12.28□□□□□ -0.44
RBFOX1-224ENST00000641259 CST9Q5W186 159 aa12.28□□□□□ -0.44
RBFOX1-224ENST00000641259 LZICQ8WZA0 190 aa12.28□□□□□ -0.44
RBFOX1-224ENST00000641259 OXNAD1Q96HP4 312 aaPredicted RBP12.28□□□□□ -0.44
RBFOX1-224ENST00000641259 HES6Q96HZ4 224 aa12.28□□□□□ -0.44
RBFOX1-224ENST00000641259 CEP295NLQ96MC4 621 aa12.28□□□□□ -0.44
RBFOX1-224ENST00000641259 ZSWIM1Q9BR11 485 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms