RNA–Protein interactions for RNA: ENST00000640640.1

SCARB2-223, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5 BASIC

Gene SCARB2, Length 4,608 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-223ENST00000640640 SLC11A2P49281 568 aa18.15■□□□□ 0.5
SCARB2-223ENST00000640640 PHEXP78562 749 aa18.15■□□□□ 0.5
SCARB2-223ENST00000640640 PCYOX1Q9UHG3 505 aa18.15■□□□□ 0.5
SCARB2-223ENST00000640640 NOL4O94818 638 aa18.15■□□□□ 0.5
SCARB2-223ENST00000640640 GJC2Q5T442 439 aaPredicted RBP18.15■□□□□ 0.5
SCARB2-223ENST00000640640 BLOC1S5Q8TDH9 187 aa18.15■□□□□ 0.5
SCARB2-223ENST00000640640 DCUN1D1Q96GG9 259 aa18.15■□□□□ 0.5
SCARB2-223ENST00000640640 MFSD14AQ96MC6 490 aa18.15■□□□□ 0.5
SCARB2-223ENST00000640640 CEP41Q9BYV8 373 aa18.15■□□□□ 0.5
SCARB2-223ENST00000640640 ILKAPQ9H0C8 392 aaPredicted RBP18.15■□□□□ 0.5
SCARB2-223ENST00000640640 RNF19AQ9NV58 838 aa18.15■□□□□ 0.5
SCARB2-223ENST00000640640 MANSC4A6NHS7 340 aaPredicted RBP18.15■□□□□ 0.5
SCARB2-223ENST00000640640 KDELR1P24390 212 aa18.15■□□□□ 0.5
SCARB2-223ENST00000640640 NOMO3P69849 1222 aa18.15■□□□□ 0.5
SCARB2-223ENST00000640640 ATP13A4Q4VNC1 1196 aa18.15■□□□□ 0.5
SCARB2-223ENST00000640640 ABHD15Q6UXT9 468 aa18.15■□□□□ 0.5
SCARB2-223ENST00000640640 GPR63Q9BZJ6 419 aa18.15■□□□□ 0.5
SCARB2-223ENST00000640640 ZSCAN5DPP0CG00 497 aa18.14■□□□□ 0.49
SCARB2-223ENST00000640640 TNFRSF8P28908 595 aa18.14■□□□□ 0.49
SCARB2-223ENST00000640640 EEF1DP3Q658K8 133 aa18.14■□□□□ 0.49
SCARB2-223ENST00000640640 TIGD7Q6NT04 549 aaPredicted RBP18.14■□□□□ 0.49
SCARB2-223ENST00000640640 UBP1Q9NZI7 540 aa18.14■□□□□ 0.49
SCARB2-223ENST00000640640 RBAK-RBAKDNI3L0D1 243 aa18.14■□□□□ 0.49
SCARB2-223ENST00000640640 ARHGDIAP52565 204 aa18.14■□□□□ 0.49
SCARB2-223ENST00000640640 EFEMP1Q12805 493 aa18.14■□□□□ 0.49
SCARB2-223ENST00000640640 PDE1CQ14123 709 aaPredicted RBP18.14■□□□□ 0.49
SCARB2-223ENST00000640640 LARP7Q4G0J3 582 aaKnown RBP eCLIP18.14■□□□□ 0.49
SCARB2-223ENST00000640640 LRRC38Q5VT99 294 aa18.14■□□□□ 0.49
SCARB2-223ENST00000640640 PRUNE1Q86TP1 453 aa18.14■□□□□ 0.49
SCARB2-223ENST00000640640 HTR3CQ8WXA8 447 aa18.14■□□□□ 0.49
SCARB2-223ENST00000640640 ALG3Q92685 438 aa18.14■□□□□ 0.49
SCARB2-223ENST00000640640 MRGBPQ9NV56 204 aa18.14■□□□□ 0.49
SCARB2-223ENST00000640640 CDYLQ9Y232 598 aa18.14■□□□□ 0.49
SCARB2-223ENST00000640640 HIST1H2AGP0C0S8 130 aaPredicted RBP18.14■□□□□ 0.49
SCARB2-223ENST00000640640 HIST1H2ADP20671 130 aa18.14■□□□□ 0.49
SCARB2-223ENST00000640640 RRP1BQ14684 758 aaKnown RBP18.14■□□□□ 0.49
SCARB2-223ENST00000640640 TMEM259Q4ZIN3 620 aa18.14■□□□□ 0.49
SCARB2-223ENST00000640640 TMCO4Q5TGY1 634 aa18.14■□□□□ 0.49
SCARB2-223ENST00000640640 CYB5D1Q6P9G0 228 aa18.14■□□□□ 0.49
SCARB2-223ENST00000640640 HIST1H2AHQ96KK5 128 aa18.14■□□□□ 0.49
SCARB2-223ENST00000640640 HIST1H2AJQ99878 128 aa18.14■□□□□ 0.49
SCARB2-223ENST00000640640 H2AFJQ9BTM1 129 aa18.14■□□□□ 0.49
SCARB2-223ENST00000640640 MRPL46Q9H2W6 279 aaKnown RBP18.14■□□□□ 0.49
SCARB2-223ENST00000640640 SAE1Q9UBE0 346 aaPredicted RBP18.14■□□□□ 0.49
SCARB2-223ENST00000640640 SH3BP1Q9Y3L3 701 aa18.14■□□□□ 0.49
SCARB2-223ENST00000640640 HES2Q9Y543 173 aa18.14■□□□□ 0.49
SCARB2-223ENST00000640640 KCNK1O00180 336 aa18.13■□□□□ 0.49
SCARB2-223ENST00000640640 ZNF197O14709 1029 aa18.13■□□□□ 0.49
SCARB2-223ENST00000640640 STX7O15400 261 aaKnown RBP18.13■□□□□ 0.49
SCARB2-223ENST00000640640 ASS1P00966 412 aaKnown RBP18.13■□□□□ 0.49
SCARB2-223ENST00000640640 SCTRP47872 440 aa18.13■□□□□ 0.49
SCARB2-223ENST00000640640 KCNT2Q6UVM3 1135 aa18.13■□□□□ 0.49
SCARB2-223ENST00000640640 STRA8Q7Z7C7 330 aa18.13■□□□□ 0.49
SCARB2-223ENST00000640640 KREMEN1Q96MU8 473 aa18.13■□□□□ 0.49
SCARB2-223ENST00000640640 NRCAMQ92823 1304 aa18.13■□□□□ 0.49
SCARB2-223ENST00000640640 O00370 1275 aa18.13■□□□□ 0.49
SCARB2-223ENST00000640640 TM9SF1O15321 606 aa18.13■□□□□ 0.49
SCARB2-223ENST00000640640 CNTFP26441 200 aa18.13■□□□□ 0.49
SCARB2-223ENST00000640640 RPL7AP62424 266 aaKnown RBP18.13■□□□□ 0.49
SCARB2-223ENST00000640640 FOXD4Q12950 439 aaPredicted RBP18.13■□□□□ 0.49
SCARB2-223ENST00000640640 MPP3Q13368 585 aa18.13■□□□□ 0.49
SCARB2-223ENST00000640640 FSCN1Q16658 493 aaKnown RBP18.13■□□□□ 0.49
SCARB2-223ENST00000640640 LRRC36Q1X8D7 754 aa18.13■□□□□ 0.49
SCARB2-223ENST00000640640 C6orf10Q5SRN2 563 aa18.13■□□□□ 0.49
SCARB2-223ENST00000640640 PTRHD1Q6GMV3 140 aaKnown RBP18.13■□□□□ 0.49
SCARB2-223ENST00000640640 SEMA4DQ92854 862 aa18.13■□□□□ 0.49
SCARB2-223ENST00000640640 NRBF2Q96F24 287 aa18.13■□□□□ 0.49
SCARB2-223ENST00000640640 ING2Q9H160 280 aa18.13■□□□□ 0.49
SCARB2-223ENST00000640640 RRN3Q9NYV6 651 aa18.13■□□□□ 0.49
SCARB2-223ENST00000640640 HAO1Q9UJM8 370 aa18.13■□□□□ 0.49
SCARB2-223ENST00000640640 CHRM3P20309 590 aa18.13■□□□□ 0.49
SCARB2-223ENST00000640640 BEX3Q00994 111 aa18.13■□□□□ 0.49
SCARB2-223ENST00000640640 MGAT5Q09328 741 aa18.13■□□□□ 0.49
SCARB2-223ENST00000640640 C15orf59Q2T9L4 293 aaPredicted RBP18.13■□□□□ 0.49
SCARB2-223ENST00000640640 HSDL1Q3SXM5 330 aa18.13■□□□□ 0.49
SCARB2-223ENST00000640640 SPDYCQ5MJ68 293 aa18.13■□□□□ 0.49
SCARB2-223ENST00000640640 MRNIPQ6NTE8 343 aa18.13■□□□□ 0.49
SCARB2-223ENST00000640640 ADAM32Q8TC27 787 aa18.13■□□□□ 0.49
SCARB2-223ENST00000640640 BHMTQ93088 406 aa18.13■□□□□ 0.49
SCARB2-223ENST00000640640 SHCBP1LQ9BZQ2 653 aa18.13■□□□□ 0.49
SCARB2-223ENST00000640640 FHDC1Q9C0D6 1143 aaPredicted RBP18.13■□□□□ 0.49
SCARB2-223ENST00000640640 COL20A1Q9P218 1284 aa18.13■□□□□ 0.49
SCARB2-223ENST00000640640 CHD2O14647 1828 aaKnown RBP18.13■□□□□ 0.49
SCARB2-223ENST00000640640 F5H5T6 163 aa18.13■□□□□ 0.49
SCARB2-223ENST00000640640 GJB1P08034 283 aa18.13■□□□□ 0.49
SCARB2-223ENST00000640640 SERPINB8P50452 374 aa18.13■□□□□ 0.49
SCARB2-223ENST00000640640 DRG2P55039 364 aaKnown RBP18.13■□□□□ 0.49
SCARB2-223ENST00000640640 THEMIS2Q5TEJ8 643 aa18.13■□□□□ 0.49
SCARB2-223ENST00000640640 PHF13Q86YI8 300 aaPredicted RBP18.13■□□□□ 0.49
SCARB2-223ENST00000640640 ZCCHC9Q8N567 271 aaKnown RBP18.13■□□□□ 0.49
SCARB2-223ENST00000640640 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.13■□□□□ 0.49
SCARB2-223ENST00000640640 ZSWIM2Q8NEG5 633 aa18.13■□□□□ 0.49
SCARB2-223ENST00000640640 GAD1Q99259 594 aa18.13■□□□□ 0.49
SCARB2-223ENST00000640640 CINPQ9BW66 212 aaPredicted RBP18.13■□□□□ 0.49
SCARB2-223ENST00000640640 CHST12Q9NRB3 414 aa18.13■□□□□ 0.49
SCARB2-223ENST00000640640 IARS2Q9NSE4 1012 aaKnown RBP18.13■□□□□ 0.49
SCARB2-223ENST00000640640 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.12■□□□□ 0.49
SCARB2-223ENST00000640640 B4GALT5O43286 388 aa18.12■□□□□ 0.49
SCARB2-223ENST00000640640 FARP2O94887 1054 aaPredicted RBP18.12■□□□□ 0.49
SCARB2-223ENST00000640640 ESRRBO95718 433 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms