RNA–Protein interactions for RNA: ENST00000640634.1

SCARB2-222, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-222ENST00000640634 AGPAT1Q99943 283 aa11.49□□□□□ -0.57
SCARB2-222ENST00000640634 NUP58Q9BVL2 599 aa11.49□□□□□ -0.57
SCARB2-222ENST00000640634 SLC4A5Q9BY07 1137 aa11.49□□□□□ -0.57
SCARB2-222ENST00000640634 CAPN10Q9HC96 672 aa11.49□□□□□ -0.57
SCARB2-222ENST00000640634 AIPL1Q9NZN9 384 aa11.49□□□□□ -0.57
SCARB2-222ENST00000640634 TRPM5Q9NZQ8 1165 aa11.49□□□□□ -0.57
SCARB2-222ENST00000640634 SCML2Q9UQR0 700 aa11.49□□□□□ -0.57
SCARB2-222ENST00000640634 LUC7L2Q9Y383 392 aaKnown RBP11.49□□□□□ -0.57
SCARB2-222ENST00000640634 DAAM1Q9Y4D1 1078 aa11.49□□□□□ -0.57
SCARB2-222ENST00000640634 NUMBLQ9Y6R0 609 aa11.49□□□□□ -0.57
SCARB2-222ENST00000640634 C19orf67A6NJJ6 358 aa11.49□□□□□ -0.57
SCARB2-222ENST00000640634 COCHO43405 550 aa11.49□□□□□ -0.57
SCARB2-222ENST00000640634 MFAP3LO75121 409 aa11.49□□□□□ -0.57
SCARB2-222ENST00000640634 GJB6O95452 261 aa11.49□□□□□ -0.57
SCARB2-222ENST00000640634 OAS1P00973 400 aaKnown RBP11.49□□□□□ -0.57
SCARB2-222ENST00000640634 CYP1A1P04798 512 aaPredicted RBP11.49□□□□□ -0.57
SCARB2-222ENST00000640634 RPL34P49207 117 aaKnown RBP11.49□□□□□ -0.57
SCARB2-222ENST00000640634 DAOAP59103 153 aa11.49□□□□□ -0.57
SCARB2-222ENST00000640634 HTR4Q13639 388 aa11.49□□□□□ -0.57
SCARB2-222ENST00000640634 ARID5BQ14865 1188 aa11.49□□□□□ -0.57
SCARB2-222ENST00000640634 WDR59Q6PJI9 974 aa11.49□□□□□ -0.57
SCARB2-222ENST00000640634 FAM183BPQ6ZVS7 135 aa11.49□□□□□ -0.57
SCARB2-222ENST00000640634 CCDC186Q7Z3E2 898 aa11.49□□□□□ -0.57
SCARB2-222ENST00000640634 LEMD2Q8NC56 503 aa11.49□□□□□ -0.57
SCARB2-222ENST00000640634 MRPS31Q92665 395 aaKnown RBP11.49□□□□□ -0.57
SCARB2-222ENST00000640634 WBP2Q969T9 261 aa11.49□□□□□ -0.57
SCARB2-222ENST00000640634 MRFAP1L1Q96HT8 127 aa11.49□□□□□ -0.57
SCARB2-222ENST00000640634 PPP1R13BQ96KQ4 1090 aa11.49□□□□□ -0.57
SCARB2-222ENST00000640634 CEP295NLQ96MC4 621 aa11.49□□□□□ -0.57
SCARB2-222ENST00000640634 ASB16Q96NS5 453 aa11.49□□□□□ -0.57
SCARB2-222ENST00000640634 ANP32EQ9BTT0 268 aa11.49□□□□□ -0.57
SCARB2-222ENST00000640634 UBXN6Q9BZV1 441 aa11.49□□□□□ -0.57
SCARB2-222ENST00000640634 IRF2BPLQ9H1B7 796 aa11.49□□□□□ -0.57
SCARB2-222ENST00000640634 LHX5Q9H2C1 402 aa11.49□□□□□ -0.57
SCARB2-222ENST00000640634 SMPD4Q9NXE4 827 aa11.49□□□□□ -0.57
SCARB2-222ENST00000640634 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.49□□□□□ -0.57
SCARB2-222ENST00000640634 EPS15L1Q9UBC2 864 aa11.49□□□□□ -0.57
SCARB2-222ENST00000640634 UXTQ9UBK9 157 aaPredicted RBP11.49□□□□□ -0.57
SCARB2-222ENST00000640634 NAGPAQ9UK23 515 aa11.49□□□□□ -0.57
SCARB2-222ENST00000640634 MYO6Q9UM54 1294 aa11.49□□□□□ -0.57
SCARB2-222ENST00000640634 FAM50BQ9Y247 325 aa11.49□□□□□ -0.57
SCARB2-222ENST00000640634 NUP210Q8TEM1 1887 aaPredicted RBP11.48□□□□□ -0.57
SCARB2-222ENST00000640634 TMCO5BA8MYB1 307 aa11.48□□□□□ -0.57
SCARB2-222ENST00000640634 DDX3XO00571 662 aaKnown RBP eCLIP11.48□□□□□ -0.575e-14■■■■■ 33.6
SCARB2-222ENST00000640634 ATP9BO43861 1147 aa11.48□□□□□ -0.57
SCARB2-222ENST00000640634 GRAP2O75791 330 aa11.48□□□□□ -0.57
SCARB2-222ENST00000640634 CKMP06732 381 aa11.48□□□□□ -0.57
SCARB2-222ENST00000640634 HSD3B2P26439 372 aa11.48□□□□□ -0.57
SCARB2-222ENST00000640634 CDH5P33151 784 aaPredicted RBP11.48□□□□□ -0.57
SCARB2-222ENST00000640634 YWHAGP61981 247 aaKnown RBP eCLIP11.48□□□□□ -0.57
SCARB2-222ENST00000640634 KLHL30Q0D2K2 578 aa11.48□□□□□ -0.57
SCARB2-222ENST00000640634 GRM2Q14416 872 aa11.48□□□□□ -0.57
SCARB2-222ENST00000640634 MEA1Q16626 185 aa11.48□□□□□ -0.57
SCARB2-222ENST00000640634 TDRD12Q587J7 1177 aaKnown RBP11.48□□□□□ -0.57
SCARB2-222ENST00000640634 PM20D1Q6GTS8 502 aa11.48□□□□□ -0.57
SCARB2-222ENST00000640634 MMS22LQ6ZRQ5 1243 aa11.48□□□□□ -0.57
SCARB2-222ENST00000640634 MON1AQ86VX9 555 aa11.48□□□□□ -0.57
SCARB2-222ENST00000640634 ARID3BQ8IVW6 561 aaPredicted RBP11.48□□□□□ -0.57
SCARB2-222ENST00000640634 CMTM8Q8IZV2 173 aa11.48□□□□□ -0.57
SCARB2-222ENST00000640634 SPC24Q8NBT2 197 aa11.48□□□□□ -0.57
SCARB2-222ENST00000640634 USP13Q92995 863 aaPredicted RBP11.48□□□□□ -0.57
SCARB2-222ENST00000640634 ACSF2Q96CM8 615 aaPredicted RBP11.48□□□□□ -0.57
SCARB2-222ENST00000640634 UHRF1Q96T88 793 aaPredicted RBP11.48□□□□□ -0.57
SCARB2-222ENST00000640634 EDEM3Q9BZQ6 932 aa11.48□□□□□ -0.57
SCARB2-222ENST00000640634 FBXO44Q9H4M3 255 aa11.48□□□□□ -0.57
SCARB2-222ENST00000640634 TASP1Q9H6P5 420 aa11.48□□□□□ -0.57
SCARB2-222ENST00000640634 ARHGAP20Q9P2F6 1191 aa11.48□□□□□ -0.57
SCARB2-222ENST00000640634 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.48□□□□□ -0.57
SCARB2-222ENST00000640634 NARSO43776 548 aaKnown RBP11.47□□□□□ -0.57
SCARB2-222ENST00000640634 TLR5O60602 858 aa11.47□□□□□ -0.57
SCARB2-222ENST00000640634 FYNP06241 537 aa11.47□□□□□ -0.57
SCARB2-222ENST00000640634 UNGP13051 313 aaPredicted RBP11.47□□□□□ -0.57
SCARB2-222ENST00000640634 RARGP13631 454 aa11.47□□□□□ -0.57
SCARB2-222ENST00000640634 PRKCIP41743 596 aa11.47□□□□□ -0.57
SCARB2-222ENST00000640634 PITX1P78337 314 aaPredicted RBP11.47□□□□□ -0.57
SCARB2-222ENST00000640634 CLEC16AQ2KHT3 1053 aa11.47□□□□□ -0.57
SCARB2-222ENST00000640634 ARHGAP15Q53QZ3 475 aa11.47□□□□□ -0.57
SCARB2-222ENST00000640634 TMEM110Q86TL2 294 aa11.47□□□□□ -0.57
SCARB2-222ENST00000640634 ZNF677Q86XU0 584 aa11.47□□□□□ -0.57
SCARB2-222ENST00000640634 GJD3Q8N144 294 aa11.47□□□□□ -0.57
SCARB2-222ENST00000640634 TC2NQ8N9U0 490 aa11.47□□□□□ -0.57
SCARB2-222ENST00000640634 TMEM35BQ8NCS4 154 aa11.47□□□□□ -0.57
SCARB2-222ENST00000640634 SMARCD2Q92925 531 aa11.47□□□□□ -0.57
SCARB2-222ENST00000640634 ZFYVE19Q96K21 471 aa11.47□□□□□ -0.57
SCARB2-222ENST00000640634 ZFRQ96KR1 1074 aaKnown RBP11.47□□□□□ -0.57
SCARB2-222ENST00000640634 HSFY1Q96LI6 401 aa11.47□□□□□ -0.57
SCARB2-222ENST00000640634 DNAJC7Q99615 494 aa11.47□□□□□ -0.57
SCARB2-222ENST00000640634 CHP1Q99653 195 aa11.47□□□□□ -0.57
SCARB2-222ENST00000640634 C11orf70Q9BRQ4 267 aa11.47□□□□□ -0.57
SCARB2-222ENST00000640634 KCNK12Q9HB15 430 aa11.47□□□□□ -0.57
SCARB2-222ENST00000640634 GKN1Q9NS71 199 aa11.47□□□□□ -0.57
SCARB2-222ENST00000640634 ABHD10Q9NUJ1 306 aa11.47□□□□□ -0.57
SCARB2-222ENST00000640634 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.47□□□□□ -0.57
SCARB2-222ENST00000640634 GDE1Q9NZC3 331 aa11.47□□□□□ -0.57
SCARB2-222ENST00000640634 PRKAG3Q9UGI9 489 aa11.47□□□□□ -0.57
SCARB2-222ENST00000640634 G3BP2Q9UN86 482 aaKnown RBP11.47□□□□□ -0.57
SCARB2-222ENST00000640634 NR2E1Q9Y466 385 aa11.47□□□□□ -0.57
SCARB2-222ENST00000640634 HELZP42694 1942 aaKnown RBP11.47□□□□□ -0.57
SCARB2-222ENST00000640634 ANHXE9PGG2 379 aa11.46□□□□□ -0.57
SCARB2-222ENST00000640634 GOLGA8SH3BPF8 625 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms