RNA–Protein interactions for RNA: ENST00000640393.1

RTTN-217, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 1,357 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-217ENST00000640393 LRRC3CA6NJW4 275 aa6.54□□□□□ -1.36
RTTN-217ENST00000640393 HNRNPDLO14979 420 aaKnown RBP6.54□□□□□ -1.36
RTTN-217ENST00000640393 KCNQ3O43525 872 aa6.54□□□□□ -1.36
RTTN-217ENST00000640393 FGAP02671 866 aa6.54□□□□□ -1.36
RTTN-217ENST00000640393 TMEM225BP0DP42 221 aa6.54□□□□□ -1.36
RTTN-217ENST00000640393 EGR1P18146 543 aa6.54□□□□□ -1.36
RTTN-217ENST00000640393 ITPKBP27987 946 aa6.54□□□□□ -1.36
RTTN-217ENST00000640393 PBX1P40424 430 aa6.54□□□□□ -1.36
RTTN-217ENST00000640393 EIF4A1P60842 406 aaKnown RBP6.54□□□□□ -1.36
RTTN-217ENST00000640393 MORC3Q14149 939 aa6.54□□□□□ -1.36
RTTN-217ENST00000640393 MRNIPQ6NTE8 343 aa6.54□□□□□ -1.36
RTTN-217ENST00000640393 CEP85Q6P2H3 762 aa6.54□□□□□ -1.36
RTTN-217ENST00000640393 KIRREL2Q6UWL6 708 aa6.54□□□□□ -1.36
RTTN-217ENST00000640393 MYLK4Q86YV6 388 aaPredicted RBP6.54□□□□□ -1.36
RTTN-217ENST00000640393 CTHRC1Q96CG8 243 aa6.54□□□□□ -1.36
RTTN-217ENST00000640393 RSPRY1Q96DX4 576 aa6.54□□□□□ -1.36
RTTN-217ENST00000640393 WDYHV1Q96HA8 205 aa6.54□□□□□ -1.36
RTTN-217ENST00000640393 VPS50Q96JG6 964 aa6.54□□□□□ -1.36
RTTN-217ENST00000640393 TTLL2Q9BWV7 592 aa6.54□□□□□ -1.36
RTTN-217ENST00000640393 CIPCQ9C0C6 399 aa6.54□□□□□ -1.36
RTTN-217ENST00000640393 WDR12Q9GZL7 423 aaKnown RBP6.54□□□□□ -1.36
RTTN-217ENST00000640393 USP29Q9HBJ7 922 aa6.54□□□□□ -1.36
RTTN-217ENST00000640393 SEMA4GQ9NTN9 838 aa6.54□□□□□ -1.36
RTTN-217ENST00000640393 IGSF9Q9P2J2 1179 aa6.54□□□□□ -1.36
RTTN-217ENST00000640393 VPS4AQ9UN37 437 aa6.54□□□□□ -1.36
RTTN-217ENST00000640393 GABRQQ9UN88 632 aa6.54□□□□□ -1.36
RTTN-217ENST00000640393 ZNF213O14771 459 aa6.53□□□□□ -1.36
RTTN-217ENST00000640393 FFAR2O15552 330 aa6.53□□□□□ -1.36
RTTN-217ENST00000640393 DRD1P21728 446 aa6.53□□□□□ -1.36
RTTN-217ENST00000640393 MCM5P33992 734 aa6.53□□□□□ -1.36
RTTN-217ENST00000640393 BFSP2Q13515 415 aa6.53□□□□□ -1.36
RTTN-217ENST00000640393 MAPKAPK3Q16644 382 aa6.53□□□□□ -1.36
RTTN-217ENST00000640393 KRTAP15-1Q3LI76 137 aa6.53□□□□□ -1.36
RTTN-217ENST00000640393 RNASE12Q5GAN4 147 aaKnown RBP6.53□□□□□ -1.36
RTTN-217ENST00000640393 USP17L6PQ6QN14 398 aa6.53□□□□□ -1.36
RTTN-217ENST00000640393 PTCHD4Q6ZW05 846 aa6.53□□□□□ -1.36
RTTN-217ENST00000640393 SUN3Q8TAQ9 357 aa6.53□□□□□ -1.36
RTTN-217ENST00000640393 CYP2W1Q8TAV3 490 aa6.53□□□□□ -1.36
RTTN-217ENST00000640393 PRR11Q96HE9 360 aaPredicted RBP6.53□□□□□ -1.36
RTTN-217ENST00000640393 TMEM41AQ96HV5 264 aa6.53□□□□□ -1.36
RTTN-217ENST00000640393 TIMP4Q99727 224 aa6.53□□□□□ -1.36
RTTN-217ENST00000640393 STK33Q9BYT3 514 aa6.53□□□□□ -1.36
RTTN-217ENST00000640393 ZCWPW1Q9H0M4 648 aa6.53□□□□□ -1.36
RTTN-217ENST00000640393 PRDM13Q9H4Q3 707 aa6.53□□□□□ -1.36
RTTN-217ENST00000640393 OBP2BQ9NPH6 170 aa6.53□□□□□ -1.36
RTTN-217ENST00000640393 TM7SF3Q9NS93 570 aa6.53□□□□□ -1.36
RTTN-217ENST00000640393 TFCP2L1Q9NZI6 479 aa6.53□□□□□ -1.36
RTTN-217ENST00000640393 WNT6Q9Y6F9 365 aa6.53□□□□□ -1.36
RTTN-217ENST00000640393 COMMD10Q9Y6G5 202 aa6.53□□□□□ -1.36
RTTN-217ENST00000640393 A0A087WV62 115 aa6.52□□□□□ -1.37
RTTN-217ENST00000640393 AQP12BA6NM10 295 aa6.52□□□□□ -1.37
RTTN-217ENST00000640393 SUV39H1O43463 412 aa6.52□□□□□ -1.37
RTTN-217ENST00000640393 WDR47O94967 919 aa6.52□□□□□ -1.37
RTTN-217ENST00000640393 MST1P26927 711 aa6.52□□□□□ -1.37
RTTN-217ENST00000640393 DIO1P49895 249 aa6.52□□□□□ -1.37
RTTN-217ENST00000640393 TNFAIP2Q03169 654 aa6.52□□□□□ -1.37
RTTN-217ENST00000640393 LMAN2Q12907 356 aa6.52□□□□□ -1.37
RTTN-217ENST00000640393 GRHL2Q6ISB3 625 aa6.52□□□□□ -1.37
RTTN-217ENST00000640393 PGBD2Q6P3X8 592 aa6.52□□□□□ -1.37
RTTN-217ENST00000640393 SERPINA13PQ6UXR4 307 aa6.52□□□□□ -1.37
RTTN-217ENST00000640393 RASGRP3Q8IV61 690 aa6.52□□□□□ -1.37
RTTN-217ENST00000640393 TERB1Q8NA31 727 aa6.52□□□□□ -1.37
RTTN-217ENST00000640393 MBD3L2Q8NHZ7 208 aaPredicted RBP6.52□□□□□ -1.37
RTTN-217ENST00000640393 TBC1D5Q92609 795 aa6.52□□□□□ -1.37
RTTN-217ENST00000640393 ZDHHC12Q96GR4 267 aa6.52□□□□□ -1.37
RTTN-217ENST00000640393 PRPF18Q99633 342 aaKnown RBP6.52□□□□□ -1.37
RTTN-217ENST00000640393 PCDHB2Q9Y5E7 798 aa6.52□□□□□ -1.37
RTTN-217ENST00000640393 TARM1B6A8C7 271 aa6.51□□□□□ -1.37
RTTN-217ENST00000640393 J3KTA2 159 aa6.51□□□□□ -1.37
RTTN-217ENST00000640393 VIPP01282 170 aa6.51□□□□□ -1.37
RTTN-217ENST00000640393 MYCLP12524 364 aaPredicted RBP6.51□□□□□ -1.37
RTTN-217ENST00000640393 HTR7P34969 479 aa6.51□□□□□ -1.37
RTTN-217ENST00000640393 HOXA4Q00056 320 aaPredicted RBP6.51□□□□□ -1.37
RTTN-217ENST00000640393 PUM3Q15397 648 aaKnown RBP6.51□□□□□ -1.37
RTTN-217ENST00000640393 SLC5A9Q2M3M2 681 aa6.51□□□□□ -1.37
RTTN-217ENST00000640393 TMEM196Q5HYL7 178 aa6.51□□□□□ -1.37
RTTN-217ENST00000640393 CCDC174Q6PII3 467 aa6.51□□□□□ -1.37
RTTN-217ENST00000640393 RD3Q7Z3Z2 195 aa6.51□□□□□ -1.37
RTTN-217ENST00000640393 ATG16L2Q8NAA4 619 aa6.51□□□□□ -1.37
RTTN-217ENST00000640393 STYXQ8WUJ0 223 aa6.51□□□□□ -1.37
RTTN-217ENST00000640393 MMS19Q96T76 1030 aa6.51□□□□□ -1.37
RTTN-217ENST00000640393 ARPC5LQ9BPX5 153 aa6.51□□□□□ -1.37
RTTN-217ENST00000640393 R3HDMLQ9H3Y0 253 aa6.51□□□□□ -1.37
RTTN-217ENST00000640393 LRFN1Q9P244 771 aa6.51□□□□□ -1.37
RTTN-217ENST00000640393 ARPP21Q9UBL0 812 aaPredicted RBP6.51□□□□□ -1.37
RTTN-217ENST00000640393 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.5□□□□□ -1.37
RTTN-217ENST00000640393 JTBO76095 146 aa6.5□□□□□ -1.37
RTTN-217ENST00000640393 TNFRSF6BO95407 300 aa6.5□□□□□ -1.37
RTTN-217ENST00000640393 ZNF804AQ7Z570 1209 aa6.5□□□□□ -1.37
RTTN-217ENST00000640393 FAM71DQ8N9W8 422 aa6.5□□□□□ -1.37
RTTN-217ENST00000640393 NGDNQ8NEJ9 315 aaKnown RBP6.5□□□□□ -1.37
RTTN-217ENST00000640393 DAZAP1Q96EP5 407 aaKnown RBP6.5□□□□□ -1.37
RTTN-217ENST00000640393 EIF3CQ99613 913 aaKnown RBP6.5□□□□□ -1.37
RTTN-217ENST00000640393 NECTIN3Q9NQS3 549 aa6.5□□□□□ -1.37
RTTN-217ENST00000640393 SNX15Q9NRS6 342 aa6.5□□□□□ -1.37
RTTN-217ENST00000640393 SCAF8Q9UPN6 1271 aaKnown RBP6.5□□□□□ -1.37
RTTN-217ENST00000640393 COL15A1P39059 1388 aa6.49□□□□□ -1.37
RTTN-217ENST00000640393 PNMA6EA0A0J9YXQ4 647 aa6.49□□□□□ -1.37
RTTN-217ENST00000640393 LGALS16A8MUM7 142 aa6.49□□□□□ -1.37
RTTN-217ENST00000640393 C1QL1O75973 258 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms