RNA–Protein interactions for RNA: ENST00000640388.1

ATM-230, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5 BASIC

Gene ATM, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-230ENST00000640388 NTN5Q8WTR8 489 aaPredicted RBP3.86□□□□□ -1.79
ATM-230ENST00000640388 TTC17Q96AE7 1141 aa3.86□□□□□ -1.79
ATM-230ENST00000640388 LRRC59Q96AG4 307 aaKnown RBP3.86□□□□□ -1.79
ATM-230ENST00000640388 SARAFQ96BY9 339 aa3.86□□□□□ -1.79
ATM-230ENST00000640388 GCC1Q96CN9 775 aa3.86□□□□□ -1.79
ATM-230ENST00000640388 ZNF764Q96H86 408 aaPredicted RBP3.86□□□□□ -1.79
ATM-230ENST00000640388 C17orf80Q9BSJ5 609 aa3.86□□□□□ -1.79
ATM-230ENST00000640388 DPCDQ9BVM2 203 aaPredicted RBP3.86□□□□□ -1.79
ATM-230ENST00000640388 NUP62CLQ9H1M0 184 aa3.86□□□□□ -1.79
ATM-230ENST00000640388 ITGB1BP2Q9UKP3 347 aa3.86□□□□□ -1.79
ATM-230ENST00000640388 PADI4Q9UM07 663 aa3.86□□□□□ -1.79
ATM-230ENST00000640388 SH2B3Q9UQQ2 575 aa3.86□□□□□ -1.79
ATM-230ENST00000640388 FAM50BQ9Y247 325 aa3.86□□□□□ -1.79
ATM-230ENST00000640388 TNFRSF18Q9Y5U5 241 aa3.86□□□□□ -1.79
ATM-230ENST00000640388 SNX13Q9Y5W8 968 aa3.86□□□□□ -1.79
ATM-230ENST00000640388 LAMB4A4D0S4 1761 aa3.86□□□□□ -1.79
ATM-230ENST00000640388 SLIT1O75093 1534 aa3.85□□□□□ -1.79
ATM-230ENST00000640388 SLIT2O94813 1529 aa3.85□□□□□ -1.79
ATM-230ENST00000640388 LOC102723971A0A1B0GUV8 181 aa3.85□□□□□ -1.79
ATM-230ENST00000640388 RAB27BO00194 218 aa3.85□□□□□ -1.79
ATM-230ENST00000640388 PQBP1O60828 265 aaKnown RBP3.85□□□□□ -1.79
ATM-230ENST00000640388 PROP1O75360 226 aa3.85□□□□□ -1.79
ATM-230ENST00000640388 PRKAR1BP31321 381 aa3.85□□□□□ -1.79
ATM-230ENST00000640388 PTDSS1P48651 473 aaKnown RBP3.85□□□□□ -1.79
ATM-230ENST00000640388 CTCFP49711 727 aaPredicted RBP3.85□□□□□ -1.79
ATM-230ENST00000640388 LBX1P52954 281 aa3.85□□□□□ -1.79
ATM-230ENST00000640388 HNRNPA0Q13151 305 aaKnown RBP3.85□□□□□ -1.79
ATM-230ENST00000640388 CCNIQ14094 377 aa3.85□□□□□ -1.79
ATM-230ENST00000640388 SLC29A2Q14542 456 aa3.85□□□□□ -1.79
ATM-230ENST00000640388 AARS2Q5JTZ9 985 aaKnown RBP3.85□□□□□ -1.79
ATM-230ENST00000640388 PCID2Q5JVF3 399 aa3.85□□□□□ -1.79
ATM-230ENST00000640388 SLC9A4Q6AI14 798 aa3.85□□□□□ -1.79
ATM-230ENST00000640388 UNC13DQ70J99 1090 aa3.85□□□□□ -1.79
ATM-230ENST00000640388 PARS2Q7L3T8 475 aaKnown RBP3.85□□□□□ -1.79
ATM-230ENST00000640388 SLC29A4Q7RTT9 530 aa3.85□□□□□ -1.79
ATM-230ENST00000640388 WDR53Q7Z5U6 358 aaPredicted RBP3.85□□□□□ -1.79
ATM-230ENST00000640388 CAND1Q86VP6 1230 aaKnown RBP3.85□□□□□ -1.79
ATM-230ENST00000640388 FANCBQ8NB91 859 aa3.85□□□□□ -1.79
ATM-230ENST00000640388 DNAJB14Q8TBM8 379 aa3.85□□□□□ -1.79
ATM-230ENST00000640388 SOCS4Q8WXH5 440 aa3.85□□□□□ -1.79
ATM-230ENST00000640388 C8orf48Q96LL4 319 aa3.85□□□□□ -1.79
ATM-230ENST00000640388 CHST8Q9H2A9 424 aa3.85□□□□□ -1.79
ATM-230ENST00000640388 DDX21Q9NR30 783 aaKnown RBP eCLIP3.85□□□□□ -1.79
ATM-230ENST00000640388 DUSP22Q9NRW4 184 aa3.85□□□□□ -1.79
ATM-230ENST00000640388 DNMT3BQ9UBC3 853 aaKnown RBP3.85□□□□□ -1.79
ATM-230ENST00000640388 CORO2BQ9UQ03 480 aa3.85□□□□□ -1.79
ATM-230ENST00000640388 CDY1Q9Y6F8 540 aa3.85□□□□□ -1.79
ATM-230ENST00000640388 SAMD9Q5K651 1589 aa3.85□□□□□ -1.79
ATM-230ENST00000640388 F8W8V4 182 aa3.84□□□□□ -1.79
ATM-230ENST00000640388 SRGAP2O75044 1071 aa3.84□□□□□ -1.79
ATM-230ENST00000640388 NPSP0C0P6 89 aa3.84□□□□□ -1.79
ATM-230ENST00000640388 TXNP10599 105 aaKnown RBP3.84□□□□□ -1.79
ATM-230ENST00000640388 IL1R1P14778 569 aa3.84□□□□□ -1.79
ATM-230ENST00000640388 RPL17P18621 184 aaKnown RBP3.84□□□□□ -1.79
ATM-230ENST00000640388 TPTEP56180 551 aa3.84□□□□□ -1.79
ATM-230ENST00000640388 NHLH1Q02575 133 aa3.84□□□□□ -1.79
ATM-230ENST00000640388 ARHGEF7Q14155 803 aa3.84□□□□□ -1.79
ATM-230ENST00000640388 COBLL1Q53SF7 1204 aa3.84□□□□□ -1.79
ATM-230ENST00000640388 CERCAMQ5T4B2 595 aa3.84□□□□□ -1.79
ATM-230ENST00000640388 LRCH2Q5VUJ6 765 aa3.84□□□□□ -1.79
ATM-230ENST00000640388 CEP85Q6P2H3 762 aa3.84□□□□□ -1.79
ATM-230ENST00000640388 SYCE2Q6PIF2 218 aa3.84□□□□□ -1.79
ATM-230ENST00000640388 ZNF788Q6ZQV5 615 aa3.84□□□□□ -1.79
ATM-230ENST00000640388 Q6ZWC4 215 aa3.84□□□□□ -1.79
ATM-230ENST00000640388 CCAR1Q8IX12 1150 aaKnown RBP3.84□□□□□ -1.79
ATM-230ENST00000640388 YAF2Q8IY57 180 aa3.84□□□□□ -1.79
ATM-230ENST00000640388 RP9Q8TA86 221 aaKnown RBP3.84□□□□□ -1.79
ATM-230ENST00000640388 TBC1D5Q92609 795 aa3.84□□□□□ -1.79
ATM-230ENST00000640388 PHKBQ93100 1093 aa3.84□□□□□ -1.79
ATM-230ENST00000640388 MSLNLQ96KJ4 702 aa3.84□□□□□ -1.79
ATM-230ENST00000640388 STRBPQ96SI9 672 aaKnown RBP3.84□□□□□ -1.79
ATM-230ENST00000640388 TRIM5Q9C035 493 aa3.84□□□□□ -1.79
ATM-230ENST00000640388 BTBD1Q9H0C5 482 aa3.84□□□□□ -1.79
ATM-230ENST00000640388 TBC1D23Q9NUY8 699 aa3.84□□□□□ -1.79
ATM-230ENST00000640388 SH3BP4Q9P0V3 963 aa3.84□□□□□ -1.79
ATM-230ENST00000640388 MID2Q9UJV3 735 aa3.84□□□□□ -1.79
ATM-230ENST00000640388 ADAMTS5Q9UNA0 930 aa3.84□□□□□ -1.79
ATM-230ENST00000640388 PRAG1Q86YV5 1406 aa3.84□□□□□ -1.79
ATM-230ENST00000640388 MIA2Q96PC5 1412 aa3.84□□□□□ -1.79
ATM-230ENST00000640388 NEXMIFQ5QGS0 1516 aa3.84□□□□□ -1.8
ATM-230ENST00000640388 SPTBN5Q9NRC6 3674 aaKnown RBP3.84□□□□□ -1.8
ATM-230ENST00000640388 LAMC1P11047 1609 aa3.84□□□□□ -1.8
ATM-230ENST00000640388 PLCH1Q4KWH8 1693 aa3.84□□□□□ -1.8
ATM-230ENST00000640388 RGPD3A6NKT7 1758 aaPredicted RBP3.84□□□□□ -1.8
ATM-230ENST00000640388 RGPD4Q7Z3J3 1758 aa3.84□□□□□ -1.8
ATM-230ENST00000640388 CHD2O14647 1828 aaKnown RBP3.84□□□□□ -1.8
ATM-230ENST00000640388 RHPN2P1A8MT19 583 aa3.83□□□□□ -1.8
ATM-230ENST00000640388 TARM1B6A8C7 271 aa3.83□□□□□ -1.8
ATM-230ENST00000640388 AP4M1O00189 453 aa3.83□□□□□ -1.8
ATM-230ENST00000640388 PSMD9O00233 223 aa3.83□□□□□ -1.8
ATM-230ENST00000640388 ZNF213O14771 459 aa3.83□□□□□ -1.8
ATM-230ENST00000640388 KIF3BO15066 747 aa3.83□□□□□ -1.8
ATM-230ENST00000640388 CCP110O43303 1012 aa3.83□□□□□ -1.8
ATM-230ENST00000640388 RRP9O43818 475 aaKnown RBP3.83□□□□□ -1.8
ATM-230ENST00000640388 PIAS2O75928 621 aa3.83□□□□□ -1.8
ATM-230ENST00000640388 JTBO76095 146 aa3.83□□□□□ -1.8
ATM-230ENST00000640388 PDE8BO95263 885 aa3.83□□□□□ -1.8
ATM-230ENST00000640388 MT-ND5P03915 603 aa3.83□□□□□ -1.8
ATM-230ENST00000640388 DLDP09622 509 aaKnown RBP3.83□□□□□ -1.8
ATM-230ENST00000640388 TPH1P17752 444 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms