RNA–Protein interactions for RNA: ENST00000640135.1

SCN1B-208, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1B, Length 4,846 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-208ENST00000640135 ATP13A1Q9HD20 1204 aa11.39□□□□□ -0.59
SCN1B-208ENST00000640135 RAD18Q9NS91 495 aa11.39□□□□□ -0.59
SCN1B-208ENST00000640135 DCTN4Q9UJW0 460 aa11.39□□□□□ -0.59
SCN1B-208ENST00000640135 IFT172Q9UG01 1749 aa11.39□□□□□ -0.59
SCN1B-208ENST00000640135 SYCE1LA8MT33 242 aa11.39□□□□□ -0.59
SCN1B-208ENST00000640135 EIF3HO15372 352 aaKnown RBP eCLIP11.39□□□□□ -0.59
SCN1B-208ENST00000640135 JCHAINP01591 159 aa11.39□□□□□ -0.59
SCN1B-208ENST00000640135 IL10P22301 178 aa11.39□□□□□ -0.59
SCN1B-208ENST00000640135 IGFBP4P22692 258 aa11.39□□□□□ -0.59
SCN1B-208ENST00000640135 RFC1P35251 1148 aaPredicted RBP11.39□□□□□ -0.59
SCN1B-208ENST00000640135 SCNN1GP51170 649 aa11.39□□□□□ -0.59
SCN1B-208ENST00000640135 CCNI2Q6ZMN8 369 aaPredicted RBP11.39□□□□□ -0.59
SCN1B-208ENST00000640135 LRRC43Q8N309 656 aa11.39□□□□□ -0.59
SCN1B-208ENST00000640135 SLC2A14Q8TDB8 520 aa11.39□□□□□ -0.59
SCN1B-208ENST00000640135 MS4A14Q96JA4 679 aa11.39□□□□□ -0.59
SCN1B-208ENST00000640135 ASAH2Q9NR71 780 aa11.39□□□□□ -0.59
SCN1B-208ENST00000640135 WWOXQ9NZC7 414 aa11.39□□□□□ -0.59
SCN1B-208ENST00000640135 TRAV19A0A0A6YYK7 116 aa11.38□□□□□ -0.59
SCN1B-208ENST00000640135 CCDC78A2IDD5 438 aa11.38□□□□□ -0.59
SCN1B-208ENST00000640135 HACD1B0YJ81 288 aa11.38□□□□□ -0.59
SCN1B-208ENST00000640135 USP2O75604 605 aaPredicted RBP11.38□□□□□ -0.59
SCN1B-208ENST00000640135 PTPN1P18031 435 aaKnown RBP11.38□□□□□ -0.59
SCN1B-208ENST00000640135 LAG3P18627 525 aa11.38□□□□□ -0.59
SCN1B-208ENST00000640135 CAMK2GQ13555 558 aaPredicted RBP11.38□□□□□ -0.59
SCN1B-208ENST00000640135 TP53BP2Q13625 1128 aa11.38□□□□□ -0.59
SCN1B-208ENST00000640135 CNGA2Q16280 664 aa11.38□□□□□ -0.59
SCN1B-208ENST00000640135 WDR41Q9HAD4 459 aa11.38□□□□□ -0.59
SCN1B-208ENST00000640135 TEKT2Q9UIF3 430 aa11.38□□□□□ -0.59
SCN1B-208ENST00000640135 FZD1Q9UP38 647 aa11.38□□□□□ -0.59
SCN1B-208ENST00000640135 PTCH2Q9Y6C5 1203 aa11.38□□□□□ -0.59
SCN1B-208ENST00000640135 ABCC6O95255 1503 aa11.38□□□□□ -0.59
SCN1B-208ENST00000640135 USP27XA6NNY8 438 aa11.38□□□□□ -0.59
SCN1B-208ENST00000640135 EEF1B2P24534 225 aaKnown RBP11.38□□□□□ -0.59
SCN1B-208ENST00000640135 PPP3CCP48454 512 aa11.38□□□□□ -0.59
SCN1B-208ENST00000640135 ITGA7Q13683 1181 aa11.38□□□□□ -0.59
SCN1B-208ENST00000640135 HECTD3Q5T447 861 aa11.38□□□□□ -0.59
SCN1B-208ENST00000640135 FOXR2Q6PJQ5 311 aa11.38□□□□□ -0.59
SCN1B-208ENST00000640135 LRRC49Q8IUZ0 686 aa11.38□□□□□ -0.59
SCN1B-208ENST00000640135 COPS5Q92905 334 aa11.38□□□□□ -0.59
SCN1B-208ENST00000640135 C2orf49Q9BVC5 232 aaPredicted RBP11.38□□□□□ -0.59
SCN1B-208ENST00000640135 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.38□□□□□ -0.59
SCN1B-208ENST00000640135 RBM12Q9NTZ6 932 aaKnown RBP11.38□□□□□ -0.59
SCN1B-208ENST00000640135 RBM22Q9NW64 420 aaKnown RBP eCLIP11.38□□□□□ -0.59
SCN1B-208ENST00000640135 COL14A1Q05707 1796 aaKnown RBP11.38□□□□□ -0.59
SCN1B-208ENST00000640135 ZNF541Q9H0D2 1346 aa11.38□□□□□ -0.59
SCN1B-208ENST00000640135 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.38□□□□□ -0.59
SCN1B-208ENST00000640135 IFRD1O00458 451 aaPredicted RBP11.38□□□□□ -0.59
SCN1B-208ENST00000640135 OR1E1P30953 314 aa11.38□□□□□ -0.59
SCN1B-208ENST00000640135 GRM5P41594 1212 aa11.38□□□□□ -0.59
SCN1B-208ENST00000640135 OTUD4Q01804 1114 aaKnown RBP11.38□□□□□ -0.59
SCN1B-208ENST00000640135 GRAMD1BQ3KR37 738 aa11.38□□□□□ -0.59
SCN1B-208ENST00000640135 NOL9Q5SY16 702 aaKnown RBP11.38□□□□□ -0.59
SCN1B-208ENST00000640135 DENND5BQ6ZUT9 1274 aa11.38□□□□□ -0.59
SCN1B-208ENST00000640135 MOB2Q70IA6 237 aa11.38□□□□□ -0.59
SCN1B-208ENST00000640135 SLC47A2Q86VL8 602 aa11.38□□□□□ -0.59
SCN1B-208ENST00000640135 TATDN2Q93075 761 aa11.38□□□□□ -0.59
SCN1B-208ENST00000640135 PPP1R16AQ96I34 528 aa11.38□□□□□ -0.59
SCN1B-208ENST00000640135 WHRNQ9P202 907 aa11.38□□□□□ -0.59
SCN1B-208ENST00000640135 FGF10O15520 208 aaPredicted RBP11.38□□□□□ -0.59
SCN1B-208ENST00000640135 KLHL2O95198 593 aa11.38□□□□□ -0.59
SCN1B-208ENST00000640135 ACAT1P24752 427 aaKnown RBP11.38□□□□□ -0.59
SCN1B-208ENST00000640135 NOS2P35228 1153 aa11.38□□□□□ -0.59
SCN1B-208ENST00000640135 SARSP49591 514 aaKnown RBP11.38□□□□□ -0.59
SCN1B-208ENST00000640135 PPIGQ13427 754 aaKnown RBP eCLIP11.38□□□□□ -0.59
SCN1B-208ENST00000640135 PRAMEF19Q5SWL8 479 aa11.38□□□□□ -0.59
SCN1B-208ENST00000640135 BEND6Q5SZJ8 279 aaPredicted RBP11.38□□□□□ -0.59
SCN1B-208ENST00000640135 APOL5Q9BWW9 433 aa11.38□□□□□ -0.59
SCN1B-208ENST00000640135 HIPK3Q9H422 1215 aa11.38□□□□□ -0.59
SCN1B-208ENST00000640135 ST3GAL5Q9UNP4 418 aa11.38□□□□□ -0.59
SCN1B-208ENST00000640135 FAM32AQ9Y421 112 aaKnown RBP11.38□□□□□ -0.59
SCN1B-208ENST00000640135 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.38□□□□□ -0.59
SCN1B-208ENST00000640135 MOXD2PA6NHM9 499 aa11.37□□□□□ -0.59
SCN1B-208ENST00000640135 RAD51CO43502 376 aa11.37□□□□□ -0.59
SCN1B-208ENST00000640135 MICAL2O94851 1124 aa11.37□□□□□ -0.59
SCN1B-208ENST00000640135 SELPP16109 830 aa11.37□□□□□ -0.59
SCN1B-208ENST00000640135 MLH1P40692 756 aa11.37□□□□□ -0.59
SCN1B-208ENST00000640135 MED21Q13503 144 aa11.37□□□□□ -0.59
SCN1B-208ENST00000640135 OR9Q1Q8NGQ5 310 aa11.37□□□□□ -0.59
SCN1B-208ENST00000640135 GANQ9H2C0 597 aa11.37□□□□□ -0.59
SCN1B-208ENST00000640135 MARCH2Q9P0N8 246 aa11.37□□□□□ -0.59
SCN1B-208ENST00000640135 SEPT3Q9UH03 358 aa11.37□□□□□ -0.59
SCN1B-208ENST00000640135 ROBO1Q9Y6N7 1651 aa11.37□□□□□ -0.59
SCN1B-208ENST00000640135 TRPC5OSA6NMA1 111 aa11.37□□□□□ -0.59
SCN1B-208ENST00000640135 ZNF185O15231 689 aa11.37□□□□□ -0.59
SCN1B-208ENST00000640135 CYP2F1P24903 491 aa11.37□□□□□ -0.59
SCN1B-208ENST00000640135 MAPK1P28482 360 aa11.37□□□□□ -0.59
SCN1B-208ENST00000640135 CARSP49589 748 aaKnown RBP11.37□□□□□ -0.59
SCN1B-208ENST00000640135 TUBP50607 506 aa11.37□□□□□ -0.59
SCN1B-208ENST00000640135 ATXN3P54252 364 aaPredicted RBP11.37□□□□□ -0.59
SCN1B-208ENST00000640135 HPCAP84074 193 aa11.37□□□□□ -0.59
SCN1B-208ENST00000640135 NBPF20Q3BBV1 942 aa11.37□□□□□ -0.59
SCN1B-208ENST00000640135 C3orf20Q8ND61 904 aa11.37□□□□□ -0.59
SCN1B-208ENST00000640135 ACTRT1Q8TDG2 376 aa11.37□□□□□ -0.59
SCN1B-208ENST00000640135 SUSD6Q92537 303 aa11.37□□□□□ -0.59
SCN1B-208ENST00000640135 PDGFDQ9GZP0 370 aaPredicted RBP11.37□□□□□ -0.59
SCN1B-208ENST00000640135 NMRK2Q9NPI5 230 aa11.37□□□□□ -0.59
SCN1B-208ENST00000640135 PCMTD2Q9NV79 361 aa11.37□□□□□ -0.59
SCN1B-208ENST00000640135 STOML1Q9UBI4 398 aa11.37□□□□□ -0.59
SCN1B-208ENST00000640135 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.37□□□□□ -0.59
SCN1B-208ENST00000640135 ROBO3Q96MS0 1386 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms