RNA–Protein interactions for RNA: ENST00000640076.1

SCARB2-220, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 1,991 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-220ENST00000640076 MTA2O94776 668 aa8.43□□□□□ -1.06
SCARB2-220ENST00000640076 SNUPNO95149 360 aaKnown RBP8.43□□□□□ -1.06
SCARB2-220ENST00000640076 S1PR4O95977 384 aa8.43□□□□□ -1.06
SCARB2-220ENST00000640076 ADH1CP00326 375 aa8.43□□□□□ -1.06
SCARB2-220ENST00000640076 CCDC172P0C7W6 258 aa8.43□□□□□ -1.06
SCARB2-220ENST00000640076 CD58P19256 250 aa8.43□□□□□ -1.06
SCARB2-220ENST00000640076 LPOP22079 712 aaPredicted RBP8.43□□□□□ -1.06
SCARB2-220ENST00000640076 ID4P47928 161 aa8.43□□□□□ -1.06
SCARB2-220ENST00000640076 KCNJ6P48051 423 aa8.43□□□□□ -1.06
SCARB2-220ENST00000640076 AARSP49588 968 aaKnown RBP eCLIP8.43□□□□□ -1.06
SCARB2-220ENST00000640076 ZNF132P52740 706 aa8.43□□□□□ -1.06
SCARB2-220ENST00000640076 YWHAEP62258 255 aaKnown RBP8.43□□□□□ -1.06
SCARB2-220ENST00000640076 INCA1Q0VD86 236 aa8.43□□□□□ -1.06
SCARB2-220ENST00000640076 MTF1Q14872 753 aa8.43□□□□□ -1.06
SCARB2-220ENST00000640076 SOWAHAQ2M3V2 549 aa8.43□□□□□ -1.06
SCARB2-220ENST00000640076 PAN2Q504Q3 1202 aaKnown RBP8.43□□□□□ -1.06
SCARB2-220ENST00000640076 RPS26P11Q5JNZ5 115 aaPredicted RBP8.43□□□□□ -1.06
SCARB2-220ENST00000640076 DCLRE1AQ6PJP8 1040 aa8.43□□□□□ -1.06
SCARB2-220ENST00000640076 TMEM270Q6UE05 265 aa8.43□□□□□ -1.06
SCARB2-220ENST00000640076 CD300LGQ6UXG3 332 aa8.43□□□□□ -1.06
SCARB2-220ENST00000640076 RAD9BQ6WBX8 426 aa8.43□□□□□ -1.06
SCARB2-220ENST00000640076 TMCO2Q7Z6W1 182 aaPredicted RBP8.43□□□□□ -1.06
SCARB2-220ENST00000640076 LRRC43Q8N309 656 aa8.43□□□□□ -1.06
SCARB2-220ENST00000640076 CPA6Q8N4T0 437 aa8.43□□□□□ -1.06
SCARB2-220ENST00000640076 NKAPQ8N5F7 415 aaKnown RBP8.43□□□□□ -1.06
SCARB2-220ENST00000640076 KLHL6Q8WZ60 621 aa8.43□□□□□ -1.06
SCARB2-220ENST00000640076 TNIP3Q96KP6 325 aa8.43□□□□□ -1.06
SCARB2-220ENST00000640076 FAM193BQ96PV7 902 aaPredicted RBP8.43□□□□□ -1.06
SCARB2-220ENST00000640076 LBHD1Q9BQE6 289 aaPredicted RBP8.43□□□□□ -1.06
SCARB2-220ENST00000640076 HAUS4Q9H6D7 363 aa8.43□□□□□ -1.06
SCARB2-220ENST00000640076 NRDE2Q9H7Z3 1164 aa8.43□□□□□ -1.06
SCARB2-220ENST00000640076 RC3H2Q9HBD1 1191 aaKnown RBP8.43□□□□□ -1.06
SCARB2-220ENST00000640076 ACP6Q9NPH0 428 aa8.43□□□□□ -1.06
SCARB2-220ENST00000640076 HCSTQ9UBK5 93 aa8.43□□□□□ -1.06
SCARB2-220ENST00000640076 TNPO3Q9Y5L0 923 aaKnown RBP8.43□□□□□ -1.06
SCARB2-220ENST00000640076 SSU72P8A0A1W2PR75 194 aa8.42□□□□□ -1.06
SCARB2-220ENST00000640076 F8W810 466 aa8.42□□□□□ -1.06
SCARB2-220ENST00000640076 TMEM189-UBE2V1I3L0A0 370 aa8.42□□□□□ -1.06
SCARB2-220ENST00000640076 SNPHO15079 494 aa8.42□□□□□ -1.06
SCARB2-220ENST00000640076 ITGB1P05556 798 aa8.42□□□□□ -1.06
SCARB2-220ENST00000640076 OR1G1P47890 313 aa8.42□□□□□ -1.06
SCARB2-220ENST00000640076 RPL6Q02878 288 aaKnown RBP8.42□□□□□ -1.06
SCARB2-220ENST00000640076 SPRED3Q2MJR0 410 aa8.42□□□□□ -1.06
SCARB2-220ENST00000640076 TIGD5Q53EQ6 642 aa8.42□□□□□ -1.06
SCARB2-220ENST00000640076 TDRD12Q587J7 1177 aaKnown RBP8.42□□□□□ -1.06
SCARB2-220ENST00000640076 FAM117BQ6P1L5 589 aa8.42□□□□□ -1.06
SCARB2-220ENST00000640076 ZNF571Q7Z3V5 609 aaPredicted RBP8.42□□□□□ -1.06
SCARB2-220ENST00000640076 SLC47A2Q86VL8 602 aa8.42□□□□□ -1.06
SCARB2-220ENST00000640076 TTC39CQ8N584 583 aa8.42□□□□□ -1.06
SCARB2-220ENST00000640076 TOP6BLQ8N6T0 577 aa8.42□□□□□ -1.06
SCARB2-220ENST00000640076 OLIG1Q8TAK6 271 aa8.42□□□□□ -1.06
SCARB2-220ENST00000640076 ZNF689Q96CS4 500 aaPredicted RBP8.42□□□□□ -1.06
SCARB2-220ENST00000640076 SENP8Q96LD8 212 aa8.42□□□□□ -1.06
SCARB2-220ENST00000640076 CCDC42Q96M95 316 aa8.42□□□□□ -1.06
SCARB2-220ENST00000640076 SYT11Q9BT88 431 aa8.42□□□□□ -1.06
SCARB2-220ENST00000640076 NHEJ1Q9H9Q4 299 aaPredicted RBP8.42□□□□□ -1.06
SCARB2-220ENST00000640076 CRTAC1Q9NQ79 661 aa8.42□□□□□ -1.06
SCARB2-220ENST00000640076 GPN3Q9UHW5 284 aaPredicted RBP8.42□□□□□ -1.06
SCARB2-220ENST00000640076 EVLQ9UI08 416 aaPredicted RBP8.42□□□□□ -1.06
SCARB2-220ENST00000640076 PYCARDQ9ULZ3 195 aa8.42□□□□□ -1.06
SCARB2-220ENST00000640076 L1RE1Q9UN81 338 aa8.42□□□□□ -1.06
SCARB2-220ENST00000640076 CYB561D2O14569 222 aa8.42□□□□□ -1.06
SCARB2-220ENST00000640076 HUS1O60921 280 aa8.42□□□□□ -1.06
SCARB2-220ENST00000640076 TACC1O75410 805 aa8.42□□□□□ -1.06
SCARB2-220ENST00000640076 SETSIPP0DME0 302 aa8.42□□□□□ -1.06
SCARB2-220ENST00000640076 CYP11B1P15538 503 aa8.42□□□□□ -1.06
SCARB2-220ENST00000640076 SLC11A1P49279 550 aa8.42□□□□□ -1.06
SCARB2-220ENST00000640076 NDST1P52848 882 aa8.42□□□□□ -1.06
SCARB2-220ENST00000640076 BPIFB4P59827 614 aa8.42□□□□□ -1.06
SCARB2-220ENST00000640076 ZNF460Q14592 562 aa8.42□□□□□ -1.06
SCARB2-220ENST00000640076 ASTE1Q2TB18 679 aaPredicted RBP8.42□□□□□ -1.06
SCARB2-220ENST00000640076 C4orf17Q53FE4 359 aa8.42□□□□□ -1.06
SCARB2-220ENST00000640076 SRLQ86TD4 932 aa8.42□□□□□ -1.06
SCARB2-220ENST00000640076 CCDC170Q8IYT3 715 aa8.42□□□□□ -1.06
SCARB2-220ENST00000640076 PDCL2Q8N4E4 241 aa8.42□□□□□ -1.06
SCARB2-220ENST00000640076 KIAA1958Q8N8K9 716 aa8.42□□□□□ -1.06
SCARB2-220ENST00000640076 APPL2Q8NEU8 664 aa8.42□□□□□ -1.06
SCARB2-220ENST00000640076 WHAMMQ8TF30 809 aa8.42□□□□□ -1.06
SCARB2-220ENST00000640076 HASPINQ8TF76 798 aa8.42□□□□□ -1.06
SCARB2-220ENST00000640076 SLC20A1Q8WUM9 679 aa8.42□□□□□ -1.06
SCARB2-220ENST00000640076 KBTBD7Q8WVZ9 684 aa8.42□□□□□ -1.06
SCARB2-220ENST00000640076 HERVK_113Q902F9 699 aa8.42□□□□□ -1.06
SCARB2-220ENST00000640076 FUBP3Q96I24 572 aaKnown RBP eCLIP8.42□□□□□ -1.06
SCARB2-220ENST00000640076 MRPL45Q9BRJ2 306 aaKnown RBP8.42□□□□□ -1.06
SCARB2-220ENST00000640076 TMEM175Q9BSA9 504 aa8.42□□□□□ -1.06
SCARB2-220ENST00000640076 HMGXB4Q9UGU5 601 aa8.42□□□□□ -1.06
SCARB2-220ENST00000640076 NOCTQ9UK39 431 aaKnown RBP8.42□□□□□ -1.06
SCARB2-220ENST00000640076 BARX2Q9UMQ3 279 aaPredicted RBP8.42□□□□□ -1.06
SCARB2-220ENST00000640076 APOBEC2Q9Y235 224 aaKnown RBP8.42□□□□□ -1.06
SCARB2-220ENST00000640076 ZKSCAN5Q9Y2L8 839 aa8.42□□□□□ -1.06
SCARB2-220ENST00000640076 PRG3Q9Y2Y8 225 aaPredicted RBP8.42□□□□□ -1.06
SCARB2-220ENST00000640076 NR2E3Q9Y5X4 410 aa8.42□□□□□ -1.06
SCARB2-220ENST00000640076 PDE4DIPQ5VU43 2346 aa8.42□□□□□ -1.06
SCARB2-220ENST00000640076 I3L4J1 428 aa8.41□□□□□ -1.06
SCARB2-220ENST00000640076 M0QZQ0 153 aa8.41□□□□□ -1.06
SCARB2-220ENST00000640076 NRP1O14786 923 aa8.41□□□□□ -1.06
SCARB2-220ENST00000640076 NDUFA10O95299 355 aa8.41□□□□□ -1.06
SCARB2-220ENST00000640076 GJB5O95377 273 aa8.41□□□□□ -1.06
SCARB2-220ENST00000640076 CALCAP01258 141 aa8.41□□□□□ -1.06
SCARB2-220ENST00000640076 ALDH2P05091 517 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms