RNA–Protein interactions for RNA: ENST00000638755.1

PAX6-238, Transcript of paired box 6, human

TSL 5 BASIC

Gene PAX6, Length 1,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PAX6-238	ENST00000638755	GATAD2A	Q86YP4	633 aa		12.48	□□□□□ -0.41
PAX6-238	ENST00000638755	ADGRF2	Q8IZF7	708 aa		12.48	□□□□□ -0.41
PAX6-238	ENST00000638755	NECAB1	Q8N987	351 aa		12.48	□□□□□ -0.41
PAX6-238	ENST00000638755	MYLPF	Q96A32	169 aa		12.48	□□□□□ -0.41
PAX6-238	ENST00000638755	NUP58	Q9BVL2	599 aa		12.48	□□□□□ -0.41
PAX6-238	ENST00000638755	TTLL2	Q9BWV7	592 aa		12.48	□□□□□ -0.41
PAX6-238	ENST00000638755	EHD2	Q9NZN4	543 aa		12.48	□□□□□ -0.41
PAX6-238	ENST00000638755	LARS	Q9P2J5	1176 aa	Known RBP	12.48	□□□□□ -0.41
PAX6-238	ENST00000638755	IL17B	Q9UHF5	180 aa		12.48	□□□□□ -0.41
PAX6-238	ENST00000638755	SNX9	Q9Y5X1	595 aa		12.48	□□□□□ -0.41
PAX6-238	ENST00000638755	TISP43	B9A030	160 aa		12.47	□□□□□ -0.41
PAX6-238	ENST00000638755	ANKRD63	C9JTQ0	380 aa		12.47	□□□□□ -0.41
PAX6-238	ENST00000638755	GFRA2	O00451	464 aa		12.47	□□□□□ -0.41
PAX6-238	ENST00000638755	COCH	O43405	550 aa		12.47	□□□□□ -0.41
PAX6-238	ENST00000638755	REC8	O95072	547 aa		12.47	□□□□□ -0.41
PAX6-238	ENST00000638755	LDOC1	O95751	146 aa	Predicted RBP	12.47	□□□□□ -0.41
PAX6-238	ENST00000638755	PIGR	P01833	764 aa		12.47	□□□□□ -0.41
PAX6-238	ENST00000638755	ITGB3	P05106	788 aa		12.47	□□□□□ -0.41
PAX6-238	ENST00000638755	ACADM	P11310	421 aa		12.47	□□□□□ -0.41
PAX6-238	ENST00000638755	LHX1	P48742	406 aa		12.47	□□□□□ -0.41
PAX6-238	ENST00000638755	TFAM	Q00059	246 aa	Known RBP	12.47	□□□□□ -0.41
PAX6-238	ENST00000638755	ORC2	Q13416	577 aa	Predicted RBP	12.47	□□□□□ -0.41
PAX6-238	ENST00000638755	TBC1D25	Q3MII6	688 aa		12.47	□□□□□ -0.41
PAX6-238	ENST00000638755	KCNT1	Q5JUK3	1230 aa		12.47	□□□□□ -0.41
PAX6-238	ENST00000638755	TDRD10	Q5VZ19	366 aa	Known RBP	12.47	□□□□□ -0.41
PAX6-238	ENST00000638755	SCARA3	Q6AZY7	606 aa		12.47	□□□□□ -0.41
PAX6-238	ENST00000638755	FAM171B	Q6P995	826 aa		12.47	□□□□□ -0.41
PAX6-238	ENST00000638755	VSTM1	Q6UX27	236 aa		12.47	□□□□□ -0.41
PAX6-238	ENST00000638755	TMPRSS6	Q8IU80	811 aa		12.47	□□□□□ -0.41
PAX6-238	ENST00000638755	C4orf32	Q8N8J7	132 aa		12.47	□□□□□ -0.41
PAX6-238	ENST00000638755	IGSF22	Q8N9C0	903 aa		12.47	□□□□□ -0.41
PAX6-238	ENST00000638755	WBP2	Q969T9	261 aa		12.47	□□□□□ -0.41
PAX6-238	ENST00000638755	SIPA1	Q96FS4	1042 aa		12.47	□□□□□ -0.41
PAX6-238	ENST00000638755	MED8	Q96G25	268 aa		12.47	□□□□□ -0.41
PAX6-238	ENST00000638755	CNDP2	Q96KP4	475 aa	Known RBP	12.47	□□□□□ -0.41
PAX6-238	ENST00000638755	SLITRK1	Q96PX8	696 aa		12.47	□□□□□ -0.41
PAX6-238	ENST00000638755	XPO6	Q96QU8	1125 aa	Known RBP	12.47	□□□□□ -0.41
PAX6-238	ENST00000638755	PLIN2	Q99541	437 aa		12.47	□□□□□ -0.41
PAX6-238	ENST00000638755	SYT15	Q9BQS2	421 aa		12.47	□□□□□ -0.41
PAX6-238	ENST00000638755	BBS2	Q9BXC9	721 aa		12.47	□□□□□ -0.41
PAX6-238	ENST00000638755	RAB34	Q9BZG1	259 aa		12.47	□□□□□ -0.41
PAX6-238	ENST00000638755	TM6SF1	Q9BZW5	370 aa		12.47	□□□□□ -0.41
PAX6-238	ENST00000638755	TRIM9	Q9C026	710 aa		12.47	□□□□□ -0.41
PAX6-238	ENST00000638755	TM9SF3	Q9HD45	589 aa		12.47	□□□□□ -0.41
PAX6-238	ENST00000638755	IGSF5	Q9NSI5	407 aa		12.47	□□□□□ -0.41
PAX6-238	ENST00000638755	STON1	Q9Y6Q2	735 aa		12.47	□□□□□ -0.41
PAX6-238	ENST00000638755		F8VP50	259 aa		12.46	□□□□□ -0.41
PAX6-238	ENST00000638755	CDK4	P11802	303 aa		12.46	□□□□□ -0.41
PAX6-238	ENST00000638755	TYR	P14679	529 aa		12.46	□□□□□ -0.41
PAX6-238	ENST00000638755	PLCG1	P19174	1290 aa		12.46	□□□□□ -0.41
PAX6-238	ENST00000638755	LMO2	P25791	158 aa		12.46	□□□□□ -0.41
PAX6-238	ENST00000638755	ADSS	P30520	456 aa		12.46	□□□□□ -0.41
PAX6-238	ENST00000638755	NOP14	P78316	857 aa	Known RBP	12.46	□□□□□ -0.41
PAX6-238	ENST00000638755	PRAMEF14	Q5SWL7	426 aa		12.46	□□□□□ -0.41
PAX6-238	ENST00000638755	TPGS1	Q6ZTW0	290 aa		12.46	□□□□□ -0.41
PAX6-238	ENST00000638755	ADAT2	Q7Z6V5	191 aa	Known RBP	12.46	□□□□□ -0.41
PAX6-238	ENST00000638755	ZNF248	Q8NDW4	579 aa		12.46	□□□□□ -0.41
PAX6-238	ENST00000638755	TTC9	Q92623	222 aa		12.46	□□□□□ -0.41
PAX6-238	ENST00000638755	PRCC	Q92733	491 aa	Predicted RBP	12.46	□□□□□ -0.41
PAX6-238	ENST00000638755	BHMT	Q93088	406 aa		12.46	□□□□□ -0.41
PAX6-238	ENST00000638755	FAM84A	Q96KN4	292 aa		12.46	□□□□□ -0.41
PAX6-238	ENST00000638755	C6orf106	Q9H6K1	298 aa	Predicted RBP	12.46	□□□□□ -0.41
PAX6-238	ENST00000638755	CRTAC1	Q9NQ79	661 aa		12.46	□□□□□ -0.41
PAX6-238	ENST00000638755	AGO2	Q9UKV8	859 aa	Known RBP	12.46	□□□□□ -0.41
PAX6-238	ENST00000638755	NUMA1	Q14980	2115 aa		12.46	□□□□□ -0.42
PAX6-238	ENST00000638755	MYO9A	B2RTY4	2548 aa		12.45	□□□□□ -0.42
PAX6-238	ENST00000638755	UBR5	O95071	2799 aa	Predicted RBP	12.45	□□□□□ -0.42
PAX6-238	ENST00000638755	LAD1	O00515	517 aa		12.45	□□□□□ -0.42
PAX6-238	ENST00000638755	GABRD	O14764	452 aa		12.45	□□□□□ -0.42
PAX6-238	ENST00000638755	CACNG3	O60359	315 aa		12.45	□□□□□ -0.42
PAX6-238	ENST00000638755	SYNCRIP	O60506	623 aa	Known RBP	12.45	□□□□□ -0.42
PAX6-238	ENST00000638755	JAK2	O60674	1132 aa		12.45	□□□□□ -0.42
PAX6-238	ENST00000638755	KRT19	P08727	400 aa		12.45	□□□□□ -0.42
PAX6-238	ENST00000638755	PDGFRB	P09619	1106 aa		12.45	□□□□□ -0.42
PAX6-238	ENST00000638755	C1S	P09871	688 aa		12.45	□□□□□ -0.42
PAX6-238	ENST00000638755	GLDC	P23378	1020 aa		12.45	□□□□□ -0.42
PAX6-238	ENST00000638755	GRIA4	P48058	902 aa		12.45	□□□□□ -0.42
PAX6-238	ENST00000638755	DGKG	P49619	791 aa		12.45	□□□□□ -0.42
PAX6-238	ENST00000638755	ACADVL	P49748	655 aa		12.45	□□□□□ -0.42
PAX6-238	ENST00000638755	UCN	P55089	124 aa		12.45	□□□□□ -0.42
PAX6-238	ENST00000638755	SOWAHA	Q2M3V2	549 aa		12.45	□□□□□ -0.42
PAX6-238	ENST00000638755	FBXL19	Q6PCT2	694 aa		12.45	□□□□□ -0.42
PAX6-238	ENST00000638755	MYCT1	Q8N699	235 aa		12.45	□□□□□ -0.42
PAX6-238	ENST00000638755	CSGALNACT2	Q8N6G5	542 aa		12.45	□□□□□ -0.42
PAX6-238	ENST00000638755	TOP6BL	Q8N6T0	577 aa		12.45	□□□□□ -0.42
PAX6-238	ENST00000638755	C1orf127	Q8N9H9	656 aa		12.45	□□□□□ -0.42
PAX6-238	ENST00000638755	SYT2	Q8N9I0	419 aa	Predicted RBP	12.45	□□□□□ -0.42
PAX6-238	ENST00000638755	CEP295NL	Q96MC4	621 aa		12.45	□□□□□ -0.42
PAX6-238	ENST00000638755	MMTAG2	Q9BU76	263 aa	Known RBP	12.45	□□□□□ -0.42
PAX6-238	ENST00000638755	CCSER2	Q9H7U1	834 aa		12.45	□□□□□ -0.42
PAX6-238	ENST00000638755	HEMK1	Q9Y5R4	338 aa	Predicted RBP	12.45	□□□□□ -0.42
PAX6-238	ENST00000638755	TRAK2	O60296	914 aa		12.44	□□□□□ -0.42
PAX6-238	ENST00000638755	IL18RAP	O95256	599 aa		12.44	□□□□□ -0.42
PAX6-238	ENST00000638755	ABCB4	P21439	1286 aa		12.44	□□□□□ -0.42
PAX6-238	ENST00000638755	CTSK	P43235	329 aa		12.44	□□□□□ -0.42
PAX6-238	ENST00000638755	WNT7B	P56706	349 aa		12.44	□□□□□ -0.42
PAX6-238	ENST00000638755	PCBP4	P57723	403 aa	Known RBP	12.44	□□□□□ -0.42
PAX6-238	ENST00000638755	MAPRE1	Q15691	268 aa	Known RBP	12.44	□□□□□ -0.42
PAX6-238	ENST00000638755	HECTD3	Q5T447	861 aa		12.44	□□□□□ -0.42
PAX6-238	ENST00000638755	HS2ST1	Q7LGA3	356 aa		12.44	□□□□□ -0.42

Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms