RNA–Protein interactions for RNA: ENST00000638725.1

SNIP1-204, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 2

Gene SNIP1, Length 2,761 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-204ENST00000638725 TWNKQ96RR1 684 aa11.33□□□□□ -0.59
SNIP1-204ENST00000638725 TUBGCP5Q96RT8 1024 aa11.33□□□□□ -0.59
SNIP1-204ENST00000638725 ASCC2Q9H1I8 757 aaPredicted RBP11.33□□□□□ -0.59
SNIP1-204ENST00000638725 PDP2Q9P2J9 529 aa11.33□□□□□ -0.59
SNIP1-204ENST00000638725 COL11A1P12107 1806 aaPredicted RBP11.33□□□□□ -0.6
SNIP1-204ENST00000638725 OGTO15294 1046 aa11.33□□□□□ -0.6
SNIP1-204ENST00000638725 APRTP07741 180 aa11.33□□□□□ -0.6
SNIP1-204ENST00000638725 KRT19P08727 400 aa11.33□□□□□ -0.6
SNIP1-204ENST00000638725 PRKCHP24723 683 aa11.33□□□□□ -0.6
SNIP1-204ENST00000638725 RBL1P28749 1068 aa11.33□□□□□ -0.6
SNIP1-204ENST00000638725 FSTL1Q12841 308 aa11.33□□□□□ -0.6
SNIP1-204ENST00000638725 CDO1Q16878 200 aa11.33□□□□□ -0.6
SNIP1-204ENST00000638725 C15orf59Q2T9L4 293 aaPredicted RBP11.33□□□□□ -0.6
SNIP1-204ENST00000638725 FAM102AQ5T9C2 384 aaPredicted RBP11.33□□□□□ -0.6
SNIP1-204ENST00000638725 MROH9Q5TGP6 573 aa11.33□□□□□ -0.6
SNIP1-204ENST00000638725 WDR78Q5VTH9 848 aa11.33□□□□□ -0.6
SNIP1-204ENST00000638725 TRMT10BQ6PF06 316 aaKnown RBP11.33□□□□□ -0.6
SNIP1-204ENST00000638725 MTHFD1LQ6UB35 978 aa11.33□□□□□ -0.6
SNIP1-204ENST00000638725 CYP4V2Q6ZWL3 525 aaPredicted RBP11.33□□□□□ -0.6
SNIP1-204ENST00000638725 CDR2LQ86X02 465 aaPredicted RBP11.33□□□□□ -0.6
SNIP1-204ENST00000638725 NDUFAF2Q8N183 169 aa11.33□□□□□ -0.6
SNIP1-204ENST00000638725 GSTCDQ8NEC7 633 aa11.33□□□□□ -0.6
SNIP1-204ENST00000638725 NR1H4Q96RI1 486 aaPredicted RBP11.33□□□□□ -0.6
SNIP1-204ENST00000638725 SDCBP2Q9H190 292 aa11.33□□□□□ -0.6
SNIP1-204ENST00000638725 GPATCH2LQ9NWQ4 482 aa11.33□□□□□ -0.6
SNIP1-204ENST00000638725 ETAA1Q9NY74 926 aa11.33□□□□□ -0.6
SNIP1-204ENST00000638725 PAK5Q9P286 719 aa11.33□□□□□ -0.6
SNIP1-204ENST00000638725 HMX2A2RU54 273 aa11.33□□□□□ -0.6
SNIP1-204ENST00000638725 MED7O43513 233 aa11.33□□□□□ -0.6
SNIP1-204ENST00000638725 SNNO75324 88 aaPredicted RBP11.33□□□□□ -0.6
SNIP1-204ENST00000638725 ENDOD1O94919 500 aa11.33□□□□□ -0.6
SNIP1-204ENST00000638725 BPGMP07738 259 aa11.33□□□□□ -0.6
SNIP1-204ENST00000638725 C6orf222P0C671 652 aaPredicted RBP11.33□□□□□ -0.6
SNIP1-204ENST00000638725 GRM1Q13255 1194 aa11.33□□□□□ -0.6
SNIP1-204ENST00000638725 TRNP1Q6NT89 227 aa11.33□□□□□ -0.6
SNIP1-204ENST00000638725 AEBP2Q6ZN18 517 aaPredicted RBP11.33□□□□□ -0.6
SNIP1-204ENST00000638725 UNC5AQ6ZN44 842 aa11.33□□□□□ -0.6
SNIP1-204ENST00000638725 RAPH1Q70E73 1250 aa11.33□□□□□ -0.6
SNIP1-204ENST00000638725 CEP120Q8N960 986 aa11.33□□□□□ -0.6
SNIP1-204ENST00000638725 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.33□□□□□ -0.6
SNIP1-204ENST00000638725 PRPF31Q8WWY3 499 aaKnown RBP11.33□□□□□ -0.6
SNIP1-204ENST00000638725 ZNF668Q96K58 619 aaPredicted RBP11.33□□□□□ -0.6
SNIP1-204ENST00000638725 ADPGKQ9BRR6 497 aa11.33□□□□□ -0.6
SNIP1-204ENST00000638725 MRPL4Q9BYD3 311 aaKnown RBP11.33□□□□□ -0.6
SNIP1-204ENST00000638725 CPSF3Q9UKF6 684 aaKnown RBP11.33□□□□□ -0.6
SNIP1-204ENST00000638725 ZNF214Q9UL59 606 aaPredicted RBP11.33□□□□□ -0.6
SNIP1-204ENST00000638725 HEY1Q9Y5J3 304 aa11.33□□□□□ -0.6
SNIP1-204ENST00000638725 ANKRD33BA6NCL7 494 aa11.32□□□□□ -0.6
SNIP1-204ENST00000638725 SLC15A5A6NIM6 579 aa11.32□□□□□ -0.6
SNIP1-204ENST00000638725 MICAL2O94851 1124 aa11.32□□□□□ -0.6
SNIP1-204ENST00000638725 APOEP02649 317 aa11.32□□□□□ -0.6
SNIP1-204ENST00000638725 SERPINA6P08185 405 aa11.32□□□□□ -0.6
SNIP1-204ENST00000638725 SRGAP2CP0DJJ0 459 aa11.32□□□□□ -0.6
SNIP1-204ENST00000638725 CRABP2P29373 138 aa11.32□□□□□ -0.6
SNIP1-204ENST00000638725 SLC25A3Q00325 362 aa11.32□□□□□ -0.6
SNIP1-204ENST00000638725 LGSNQ5TDP6 509 aa11.32□□□□□ -0.6
SNIP1-204ENST00000638725 TTLL6Q8N841 843 aa11.32□□□□□ -0.6
SNIP1-204ENST00000638725 MTMR14Q8NCE2 650 aa11.32□□□□□ -0.6
SNIP1-204ENST00000638725 STKLD1Q8NE28 680 aa11.32□□□□□ -0.6
SNIP1-204ENST00000638725 MCRS1Q96EZ8 462 aa11.32□□□□□ -0.6
SNIP1-204ENST00000638725 PIWIL1Q96J94 861 aaKnown RBP11.32□□□□□ -0.6
SNIP1-204ENST00000638725 TEPSINQ96N21 525 aa11.32□□□□□ -0.6
SNIP1-204ENST00000638725 PCYT2Q99447 389 aa11.32□□□□□ -0.6
SNIP1-204ENST00000638725 ACO2Q99798 780 aaKnown RBP11.32□□□□□ -0.6
SNIP1-204ENST00000638725 NIFKQ9BYG3 293 aaKnown RBP11.32□□□□□ -0.6
SNIP1-204ENST00000638725 ETNK2Q9NVF9 386 aa11.32□□□□□ -0.6
SNIP1-204ENST00000638725 ASNSD1Q9NWL6 643 aa11.32□□□□□ -0.6
SNIP1-204ENST00000638725 MAD1L1Q9Y6D9 718 aa11.32□□□□□ -0.6
SNIP1-204ENST00000638725 A0A088AWK7 358 aa11.32□□□□□ -0.6
SNIP1-204ENST00000638725 M0QYV0 167 aa11.32□□□□□ -0.6
SNIP1-204ENST00000638725 BUD23O43709 281 aaKnown RBP11.32□□□□□ -0.6
SNIP1-204ENST00000638725 LYPLA1O75608 230 aaPredicted RBP11.32□□□□□ -0.6
SNIP1-204ENST00000638725 GRAP2O75791 330 aa11.32□□□□□ -0.6
SNIP1-204ENST00000638725 KRT38O76015 456 aa11.32□□□□□ -0.6
SNIP1-204ENST00000638725 PRKCBP05771 671 aa11.32□□□□□ -0.6
SNIP1-204ENST00000638725 YY1P25490 414 aa11.32□□□□□ -0.6
SNIP1-204ENST00000638725 CPOXP36551 454 aa11.32□□□□□ -0.6
SNIP1-204ENST00000638725 PDE1BQ01064 536 aa11.32□□□□□ -0.6
SNIP1-204ENST00000638725 STX3Q13277 289 aa11.32□□□□□ -0.6
SNIP1-204ENST00000638725 TFDP2Q14188 446 aa11.32□□□□□ -0.6
SNIP1-204ENST00000638725 TMEM132BQ14DG7 1078 aa11.32□□□□□ -0.6
SNIP1-204ENST00000638725 DPH6Q7L8W6 267 aa11.32□□□□□ -0.6
SNIP1-204ENST00000638725 MPP5Q8N3R9 675 aa11.32□□□□□ -0.6
SNIP1-204ENST00000638725 POU5F2Q8N7G0 328 aa11.32□□□□□ -0.6
SNIP1-204ENST00000638725 PLD5Q8N7P1 536 aa11.32□□□□□ -0.6
SNIP1-204ENST00000638725 SLC4A11Q8NBS3 891 aa11.32□□□□□ -0.6
SNIP1-204ENST00000638725 FLAD1Q8NFF5 587 aa11.32□□□□□ -0.6
SNIP1-204ENST00000638725 ZBED3Q96IU2 234 aaPredicted RBP11.32□□□□□ -0.6
SNIP1-204ENST00000638725 RNF157Q96PX1 679 aa11.32□□□□□ -0.6
SNIP1-204ENST00000638725 MMP19Q99542 508 aa11.32□□□□□ -0.6
SNIP1-204ENST00000638725 APOL6Q9BWW8 343 aa11.32□□□□□ -0.6
SNIP1-204ENST00000638725 ZCWPW1Q9H0M4 648 aa11.32□□□□□ -0.6
SNIP1-204ENST00000638725 SMYD3Q9H7B4 428 aa11.32□□□□□ -0.6
SNIP1-204ENST00000638725 XAB2Q9HCS7 855 aaKnown RBP11.32□□□□□ -0.6
SNIP1-204ENST00000638725 MKS1Q9NXB0 559 aa11.32□□□□□ -0.6
SNIP1-204ENST00000638725 SDR42E2A6NKP2 422 aa11.31□□□□□ -0.6
SNIP1-204ENST00000638725 ITM2AO43736 263 aa11.31□□□□□ -0.6
SNIP1-204ENST00000638725 RNASEH1O60930 286 aaKnown RBP11.31□□□□□ -0.6
SNIP1-204ENST00000638725 ZBED1O96006 694 aa11.31□□□□□ -0.6
SNIP1-204ENST00000638725 TNNC2P02585 160 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms