RNA–Protein interactions for RNA: ENST00000637450.1

CLN6-220, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3

Gene CLN6, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-220ENST00000637450 WHAMMQ8TF30 809 aa19.5■□□□□ 0.71
CLN6-220ENST00000637450 CYFIP2Q96F07 1278 aa19.5■□□□□ 0.71
CLN6-220ENST00000637450 NT5C1AQ9BXI3 368 aa19.5■□□□□ 0.71
CLN6-220ENST00000637450 IMPG2Q9BZV3 1241 aa19.5■□□□□ 0.71
CLN6-220ENST00000637450 ZDHHC4Q9NPG8 344 aa19.5■□□□□ 0.71
CLN6-220ENST00000637450 CYLDQ9NQC7 956 aa19.5■□□□□ 0.71
CLN6-220ENST00000637450 OSER1Q9NX31 292 aa19.5■□□□□ 0.71
CLN6-220ENST00000637450 DEC1Q9P2X7 70 aa19.5■□□□□ 0.71
CLN6-220ENST00000637450 MAPK8IP1Q9UQF2 711 aa19.5■□□□□ 0.71
CLN6-220ENST00000637450 MYO16Q9Y6X6 1858 aa19.5■□□□□ 0.71
CLN6-220ENST00000637450 CHD8Q9HCK8 2581 aa19.49■□□□□ 0.71
CLN6-220ENST00000637450 KIAA1549LQ6ZVL6 1849 aa19.49■□□□□ 0.71
CLN6-220ENST00000637450 KRT13P13646 458 aa19.49■□□□□ 0.71
CLN6-220ENST00000637450 KCNA4P22459 653 aa19.49■□□□□ 0.71
CLN6-220ENST00000637450 RPL13P26373 211 aaKnown RBP19.49■□□□□ 0.71
CLN6-220ENST00000637450 PSMC2P35998 433 aaKnown RBP19.49■□□□□ 0.71
CLN6-220ENST00000637450 ATP5C1P36542 298 aaKnown RBP19.49■□□□□ 0.71
CLN6-220ENST00000637450 P2RY2P41231 377 aa19.49■□□□□ 0.71
CLN6-220ENST00000637450 ADAM9Q13443 819 aa19.49■□□□□ 0.71
CLN6-220ENST00000637450 KRBA2Q6ZNG9 492 aa19.49■□□□□ 0.71
CLN6-220ENST00000637450 FAM186BQ8IYM0 893 aa19.49■□□□□ 0.71
CLN6-220ENST00000637450 RLN3Q8WXF3 142 aa19.49■□□□□ 0.71
CLN6-220ENST00000637450 EDEM2Q9BV94 578 aa19.49■□□□□ 0.71
CLN6-220ENST00000637450 PNPLA8Q9NP80 782 aa19.49■□□□□ 0.71
CLN6-220ENST00000637450 MYOFQ9NZM1 2061 aa19.48■□□□□ 0.71
CLN6-220ENST00000637450 A0A1W2PQ27 194 aa19.48■□□□□ 0.71
CLN6-220ENST00000637450 A0A1W2PQ64 194 aa19.48■□□□□ 0.71
CLN6-220ENST00000637450 A0A1W2PQD8 194 aa19.48■□□□□ 0.71
CLN6-220ENST00000637450 CYP26A1O43174 497 aa19.48■□□□□ 0.71
CLN6-220ENST00000637450 CILPO75339 1184 aa19.48■□□□□ 0.71
CLN6-220ENST00000637450 KCNK5O95279 499 aa19.48■□□□□ 0.71
CLN6-220ENST00000637450 ACO1P21399 889 aaKnown RBP19.48■□□□□ 0.71
CLN6-220ENST00000637450 KLHDC10Q6PID8 442 aa19.48■□□□□ 0.71
CLN6-220ENST00000637450 NUDT18Q6ZVK8 323 aa19.48■□□□□ 0.71
CLN6-220ENST00000637450 CYP2U1Q7Z449 544 aa19.48■□□□□ 0.71
CLN6-220ENST00000637450 TERB1Q8NA31 727 aa19.48■□□□□ 0.71
CLN6-220ENST00000637450 NIF3L1Q9GZT8 377 aa19.48■□□□□ 0.71
CLN6-220ENST00000637450 SCAND2PQ9GZW5 306 aaPredicted RBP19.48■□□□□ 0.71
CLN6-220ENST00000637450 NMUR1Q9HB89 426 aa19.48■□□□□ 0.71
CLN6-220ENST00000637450 TMEM8AQ9HCN3 771 aa19.48■□□□□ 0.71
CLN6-220ENST00000637450 HCN2Q9UL51 889 aa19.48■□□□□ 0.71
CLN6-220ENST00000637450 STARD13Q9Y3M8 1113 aa19.48■□□□□ 0.71
CLN6-220ENST00000637450 PCDHA5Q9Y5H7 936 aa19.48■□□□□ 0.71
CLN6-220ENST00000637450 CACNA1BQ00975 2339 aa19.48■□□□□ 0.71
CLN6-220ENST00000637450 LNP1A1A4G5 178 aa19.47■□□□□ 0.71
CLN6-220ENST00000637450 C4orf47A7E2U8 309 aa19.47■□□□□ 0.71
CLN6-220ENST00000637450 KHNYNO15037 678 aaKnown RBP19.47■□□□□ 0.71
CLN6-220ENST00000637450 TRIM24O15164 1050 aa19.47■□□□□ 0.71
CLN6-220ENST00000637450 CD58P19256 250 aa19.47■□□□□ 0.71
CLN6-220ENST00000637450 DHPSP49366 369 aaPredicted RBP19.47■□□□□ 0.71
CLN6-220ENST00000637450 KIF11P52732 1056 aa19.47■□□□□ 0.71
CLN6-220ENST00000637450 MAP7D1Q3KQU3 841 aa19.47■□□□□ 0.71
CLN6-220ENST00000637450 ZCWPW2Q504Y3 356 aa19.47■□□□□ 0.71
CLN6-220ENST00000637450 TRMT11Q7Z4G4 463 aaKnown RBP19.47■□□□□ 0.71
CLN6-220ENST00000637450 FRMD1Q8N878 549 aa19.47■□□□□ 0.71
CLN6-220ENST00000637450 ZNF513Q8N8E2 541 aaPredicted RBP19.47■□□□□ 0.71
CLN6-220ENST00000637450 HMGB4Q8WW32 186 aa19.47■□□□□ 0.71
CLN6-220ENST00000637450 JAKMIP2Q96AA8 810 aa19.47■□□□□ 0.71
CLN6-220ENST00000637450 GOLPH3LQ9H4A5 285 aa19.47■□□□□ 0.71
CLN6-220ENST00000637450 MTPAPQ9NVV4 582 aaKnown RBP eCLIP19.47■□□□□ 0.71
CLN6-220ENST00000637450 BCCIPQ9P287 314 aaKnown RBP eCLIP19.47■□□□□ 0.71
CLN6-220ENST00000637450 MBD1Q9UIS9 605 aaPredicted RBP19.47■□□□□ 0.71
CLN6-220ENST00000637450 A0A1W2PQH9 124 aa19.46■□□□□ 0.71
CLN6-220ENST00000637450 TCRBV21S2A2A0A5A6 115 aa19.46■□□□□ 0.71
CLN6-220ENST00000637450 MAP3K13O43283 966 aa19.46■□□□□ 0.71
CLN6-220ENST00000637450 ZNF202O95125 648 aa19.46■□□□□ 0.71
CLN6-220ENST00000637450 RARGP13631 454 aa19.46■□□□□ 0.71
CLN6-220ENST00000637450 PMLP29590 882 aa19.46■□□□□ 0.71
CLN6-220ENST00000637450 GTF2H1P32780 548 aa19.46■□□□□ 0.71
CLN6-220ENST00000637450 PLA2G4AP47712 749 aa19.46■□□□□ 0.71
CLN6-220ENST00000637450 GOLGA8FQ08AF8 430 aa19.46■□□□□ 0.71
CLN6-220ENST00000637450 GOLGA8DPQ0D2H9 430 aa19.46■□□□□ 0.71
CLN6-220ENST00000637450 BYSLQ13895 437 aaKnown RBP19.46■□□□□ 0.71
CLN6-220ENST00000637450 C10orf76Q5T2E6 689 aa19.46■□□□□ 0.71
CLN6-220ENST00000637450 KRT39Q6A163 491 aa19.46■□□□□ 0.71
CLN6-220ENST00000637450 GRAMD4Q6IC98 578 aa19.46■□□□□ 0.71
CLN6-220ENST00000637450 LPCAT2Q7L5N7 544 aa19.46■□□□□ 0.71
CLN6-220ENST00000637450 ZNF276Q8N554 614 aa19.46■□□□□ 0.71
CLN6-220ENST00000637450 CCDC150Q8NCX0 1101 aa19.46■□□□□ 0.71
CLN6-220ENST00000637450 PIGKQ92643 395 aa19.46■□□□□ 0.71
CLN6-220ENST00000637450 SPACA7Q96KW9 195 aa19.46■□□□□ 0.71
CLN6-220ENST00000637450 DUSP16Q9BY84 665 aa19.46■□□□□ 0.71
CLN6-220ENST00000637450 MMRN2Q9H8L6 949 aa19.46■□□□□ 0.71
CLN6-220ENST00000637450 MARK1Q9P0L2 795 aa19.46■□□□□ 0.71
CLN6-220ENST00000637450 WDR35Q9P2L0 1181 aa19.46■□□□□ 0.71
CLN6-220ENST00000637450 LSM7Q9UK45 103 aaKnown RBP19.46■□□□□ 0.71
CLN6-220ENST00000637450 NUDT5Q9UKK9 219 aa19.46■□□□□ 0.71
CLN6-220ENST00000637450 ATP6V1DQ9Y5K8 247 aa19.46■□□□□ 0.71
CLN6-220ENST00000637450 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa19.45■□□□□ 0.7
CLN6-220ENST00000637450 PATE3B3GLJ2 98 aa19.45■□□□□ 0.7
CLN6-220ENST00000637450 NEDD8-MDP1E9PL57 170 aa19.45■□□□□ 0.7
CLN6-220ENST00000637450 CACNG3O60359 315 aa19.45■□□□□ 0.7
CLN6-220ENST00000637450 TYRP14679 529 aa19.45■□□□□ 0.7
CLN6-220ENST00000637450 IRX4P78413 519 aa19.45■□□□□ 0.7
CLN6-220ENST00000637450 EDRF1Q3B7T1 1238 aa19.45■□□□□ 0.7
CLN6-220ENST00000637450 SPDYCQ5MJ68 293 aa19.45■□□□□ 0.7
CLN6-220ENST00000637450 PPP1R26Q5T8A7 1209 aaPredicted RBP19.45■□□□□ 0.7
CLN6-220ENST00000637450 CCDC186Q7Z3E2 898 aa19.45■□□□□ 0.7
CLN6-220ENST00000637450 SCD5Q86SK9 330 aa19.45■□□□□ 0.7
CLN6-220ENST00000637450 MIB1Q86YT6 1006 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms