RNA–Protein interactions for RNA: ENST00000636999.1

CACNA1D-220, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

TSL 5

Gene CACNA1D, Length 4,212 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-220ENST00000636999 ZBTB10Q96DT7 871 aa7.98□□□□□ -1.13
CACNA1D-220ENST00000636999 NEUROG2Q9H2A3 272 aa7.98□□□□□ -1.13
CACNA1D-220ENST00000636999 WDCPQ9H6R7 721 aa7.98□□□□□ -1.13
CACNA1D-220ENST00000636999 CATSPERBQ9H7T0 1116 aa7.98□□□□□ -1.13
CACNA1D-220ENST00000636999 SLC24A3Q9HC58 644 aa7.98□□□□□ -1.13
CACNA1D-220ENST00000636999 RNF19AQ9NV58 838 aa7.98□□□□□ -1.13
CACNA1D-220ENST00000636999 RRN3Q9NYV6 651 aa7.98□□□□□ -1.13
CACNA1D-220ENST00000636999 PSMC3IPQ9P2W1 217 aaPredicted RBP7.98□□□□□ -1.13
CACNA1D-220ENST00000636999 SMG5Q9UPR3 1016 aaKnown RBP7.98□□□□□ -1.13
CACNA1D-220ENST00000636999 COL24A1Q17RW2 1714 aa7.98□□□□□ -1.13
CACNA1D-220ENST00000636999 LAMB2P55268 1798 aa7.98□□□□□ -1.13
CACNA1D-220ENST00000636999 DNAJC25-GNG10A0A024R161 153 aa7.98□□□□□ -1.13
CACNA1D-220ENST00000636999 SMIM28A0A1B0GU29 152 aa7.98□□□□□ -1.13
CACNA1D-220ENST00000636999 RGS20O76081 388 aa7.98□□□□□ -1.13
CACNA1D-220ENST00000636999 PROSCO94903 275 aa7.98□□□□□ -1.13
CACNA1D-220ENST00000636999 TUFMP49411 452 aaKnown RBP7.98□□□□□ -1.13
CACNA1D-220ENST00000636999 EPHB3P54753 998 aa7.98□□□□□ -1.13
CACNA1D-220ENST00000636999 PURAQ00577 322 aaKnown RBP7.98□□□□□ -1.13
CACNA1D-220ENST00000636999 POU5F1Q01860 360 aaKnown RBP7.98□□□□□ -1.13
CACNA1D-220ENST00000636999 ENPEPQ07075 957 aa7.98□□□□□ -1.13
CACNA1D-220ENST00000636999 OVGP1Q12889 678 aa7.98□□□□□ -1.13
CACNA1D-220ENST00000636999 WSCD1Q658N2 575 aa7.98□□□□□ -1.13
CACNA1D-220ENST00000636999 PID1Q7Z2X4 250 aa7.98□□□□□ -1.13
CACNA1D-220ENST00000636999 ATP6V0D2Q8N8Y2 350 aa7.98□□□□□ -1.13
CACNA1D-220ENST00000636999 TUBB6Q9BUF5 446 aa7.98□□□□□ -1.13
CACNA1D-220ENST00000636999 FSD1LQ9BXM9 530 aa7.98□□□□□ -1.13
CACNA1D-220ENST00000636999 SMYD3Q9H7B4 428 aa7.98□□□□□ -1.13
CACNA1D-220ENST00000636999 CYP4F11Q9HBI6 524 aa7.98□□□□□ -1.13
CACNA1D-220ENST00000636999 AVENQ9NQS1 362 aaPredicted RBP7.98□□□□□ -1.13
CACNA1D-220ENST00000636999 WHRNQ9P202 907 aa7.98□□□□□ -1.13
CACNA1D-220ENST00000636999 CTNNAL1Q9UBT7 734 aa7.98□□□□□ -1.13
CACNA1D-220ENST00000636999 MARCOQ9UEW3 520 aaPredicted RBP7.98□□□□□ -1.13
CACNA1D-220ENST00000636999 XPO7Q9UIA9 1087 aaKnown RBP7.98□□□□□ -1.13
CACNA1D-220ENST00000636999 SH3BP1Q9Y3L3 701 aa7.98□□□□□ -1.13
CACNA1D-220ENST00000636999 PCDHA3Q9Y5H8 950 aa7.98□□□□□ -1.13
CACNA1D-220ENST00000636999 TAF1LQ8IZX4 1826 aa7.97□□□□□ -1.13
CACNA1D-220ENST00000636999 TULP2O00295 520 aa7.97□□□□□ -1.13
CACNA1D-220ENST00000636999 KCNN4O15554 427 aa7.97□□□□□ -1.13
CACNA1D-220ENST00000636999 MICAL2O94851 1124 aa7.97□□□□□ -1.13
CACNA1D-220ENST00000636999 PTPN1P18031 435 aaKnown RBP7.97□□□□□ -1.13
CACNA1D-220ENST00000636999 DNAJB2P25686 324 aa7.97□□□□□ -1.13
CACNA1D-220ENST00000636999 TM4SF4P48230 202 aa7.97□□□□□ -1.13
CACNA1D-220ENST00000636999 VEGFBP49765 207 aa7.97□□□□□ -1.13
CACNA1D-220ENST00000636999 COPS2P61201 443 aa7.97□□□□□ -1.13
CACNA1D-220ENST00000636999 THOC5Q13769 683 aaKnown RBP7.97□□□□□ -1.13
CACNA1D-220ENST00000636999 CTU1Q7Z7A3 348 aaKnown RBP7.97□□□□□ -1.13
CACNA1D-220ENST00000636999 CHSY1Q86X52 802 aa7.97□□□□□ -1.13
CACNA1D-220ENST00000636999 YAF2Q8IY57 180 aa7.97□□□□□ -1.13
CACNA1D-220ENST00000636999 FAM71DQ8N9W8 422 aa7.97□□□□□ -1.13
CACNA1D-220ENST00000636999 SPATA18Q8TC71 538 aa7.97□□□□□ -1.13
CACNA1D-220ENST00000636999 ZNF296Q8WUU4 475 aaPredicted RBP7.97□□□□□ -1.13
CACNA1D-220ENST00000636999 RXFP2Q8WXD0 754 aa7.97□□□□□ -1.13
CACNA1D-220ENST00000636999 HHIPL1Q96JK4 782 aa7.97□□□□□ -1.13
CACNA1D-220ENST00000636999 FAM161BQ96MY7 647 aa7.97□□□□□ -1.13
CACNA1D-220ENST00000636999 SH3GL2Q99962 352 aa7.97□□□□□ -1.13
CACNA1D-220ENST00000636999 TSEN34Q9BSV6 310 aaKnown RBP7.97□□□□□ -1.13
CACNA1D-220ENST00000636999 TMEM121Q9BTD3 319 aa7.97□□□□□ -1.13
CACNA1D-220ENST00000636999 CXorf56Q9H5V9 222 aa7.97□□□□□ -1.13
CACNA1D-220ENST00000636999 ERVK-5Q9HDB9 667 aa7.97□□□□□ -1.13
CACNA1D-220ENST00000636999 NAALADL1Q9UQQ1 740 aa7.97□□□□□ -1.13
CACNA1D-220ENST00000636999 NR2E1Q9Y466 385 aa7.97□□□□□ -1.13
CACNA1D-220ENST00000636999 FARP1Q9Y4F1 1045 aaPredicted RBP7.97□□□□□ -1.13
CACNA1D-220ENST00000636999 BTNL10A8MVZ5 291 aa7.97□□□□□ -1.13
CACNA1D-220ENST00000636999 ARVCFO00192 962 aa7.97□□□□□ -1.13
CACNA1D-220ENST00000636999 CNMDO75829 334 aa7.97□□□□□ -1.13
CACNA1D-220ENST00000636999 KRT4P19013 534 aa7.97□□□□□ -1.13
CACNA1D-220ENST00000636999 SEPT6Q14141 434 aa7.97□□□□□ -1.13
CACNA1D-220ENST00000636999 ZNF235Q14590 738 aa7.97□□□□□ -1.13
CACNA1D-220ENST00000636999 ASTE1Q2TB18 679 aaPredicted RBP7.97□□□□□ -1.13
CACNA1D-220ENST00000636999 DAB2IPQ5VWQ8 1189 aa7.97□□□□□ -1.13
CACNA1D-220ENST00000636999 ITIH5Q86UX2 942 aa7.97□□□□□ -1.13
CACNA1D-220ENST00000636999 NUDCD3Q8IVD9 361 aa7.97□□□□□ -1.13
CACNA1D-220ENST00000636999 DTX3LQ8TDB6 740 aa7.97□□□□□ -1.13
CACNA1D-220ENST00000636999 STAU2Q9NUL3 570 aaKnown RBP eCLIP7.97□□□□□ -1.13
CACNA1D-220ENST00000636999 BFARQ9NZS9 450 aa7.97□□□□□ -1.13
CACNA1D-220ENST00000636999 CPSF2Q9P2I0 782 aaKnown RBP7.97□□□□□ -1.13
CACNA1D-220ENST00000636999 SBF2Q86WG5 1849 aa7.97□□□□□ -1.13
CACNA1D-220ENST00000636999 PIGRP01833 764 aa7.97□□□□□ -1.13
CACNA1D-220ENST00000636999 TARSP26639 723 aaKnown RBP7.97□□□□□ -1.13
CACNA1D-220ENST00000636999 SLC11A2P49281 568 aa7.97□□□□□ -1.13
CACNA1D-220ENST00000636999 CTCFP49711 727 aaPredicted RBP7.97□□□□□ -1.13
CACNA1D-220ENST00000636999 ASPHQ12797 758 aa7.97□□□□□ -1.13
CACNA1D-220ENST00000636999 PDK1Q15118 436 aa7.97□□□□□ -1.13
CACNA1D-220ENST00000636999 FAXCQ5TGI0 409 aa7.97□□□□□ -1.13
CACNA1D-220ENST00000636999 LONP2Q86WA8 852 aa7.97□□□□□ -1.13
CACNA1D-220ENST00000636999 WDR75Q8IWA0 830 aaKnown RBP7.97□□□□□ -1.13
CACNA1D-220ENST00000636999 KIRREL3Q8IZU9 778 aa7.97□□□□□ -1.13
CACNA1D-220ENST00000636999 EIF1ADQ8N9N8 165 aaKnown RBP7.97□□□□□ -1.13
CACNA1D-220ENST00000636999 FAM172AQ8WUF8 416 aa7.97□□□□□ -1.13
CACNA1D-220ENST00000636999 EMID1Q96A84 441 aaPredicted RBP7.97□□□□□ -1.13
CACNA1D-220ENST00000636999 YIPF3Q9GZM5 350 aa7.97□□□□□ -1.13
CACNA1D-220ENST00000636999 VPS11Q9H270 941 aa7.97□□□□□ -1.13
CACNA1D-220ENST00000636999 TRMT13Q9NUP7 481 aaKnown RBP7.97□□□□□ -1.13
CACNA1D-220ENST00000636999 CDH9Q9ULB4 789 aa7.97□□□□□ -1.13
CACNA1D-220ENST00000636999 FIS1Q9Y3D6 152 aa7.97□□□□□ -1.13
CACNA1D-220ENST00000636999 PTCH2Q9Y6C5 1203 aa7.97□□□□□ -1.13
CACNA1D-220ENST00000636999 DFFAO00273 331 aa7.96□□□□□ -1.13
CACNA1D-220ENST00000636999 MAP3K7O43318 606 aa7.96□□□□□ -1.13
CACNA1D-220ENST00000636999 EPHB2P29323 1055 aa7.96□□□□□ -1.13
CACNA1D-220ENST00000636999 CCND3P30281 292 aaPredicted RBP7.96□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms