RNA–Protein interactions for RNA: ENST00000636934.1

CLN8-211, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5 BASIC

Gene CLN8, Length 1,790 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-211ENST00000636934 SLC20A2Q08357 652 aa19.27■□□□□ 0.67
CLN8-211ENST00000636934 MPP2Q14168 576 aa19.27■□□□□ 0.67
CLN8-211ENST00000636934 SPARCL1Q14515 664 aa19.27■□□□□ 0.67
CLN8-211ENST00000636934 CCL14Q16627 93 aa19.27■□□□□ 0.67
CLN8-211ENST00000636934 RAB6CQ53S08 254 aa19.27■□□□□ 0.67
CLN8-211ENST00000636934 NUGGCQ68CJ6 796 aa19.27■□□□□ 0.67
CLN8-211ENST00000636934 C17orf99Q6UX52 265 aa19.27■□□□□ 0.67
CLN8-211ENST00000636934 CAPN12Q6ZSI9 719 aa19.27■□□□□ 0.67
CLN8-211ENST00000636934 RSPH3Q86UC2 560 aa19.27■□□□□ 0.67
CLN8-211ENST00000636934 PSTKQ8IV42 348 aaKnown RBP19.27■□□□□ 0.67
CLN8-211ENST00000636934 SMG8Q8ND04 991 aaKnown RBP19.27■□□□□ 0.67
CLN8-211ENST00000636934 PCDH19Q8TAB3 1148 aa19.27■□□□□ 0.67
CLN8-211ENST00000636934 SLC2A14Q8TDB8 520 aa19.27■□□□□ 0.67
CLN8-211ENST00000636934 CCT6BQ92526 530 aa19.27■□□□□ 0.67
CLN8-211ENST00000636934 TGS1Q96RS0 853 aaKnown RBP19.27■□□□□ 0.67
CLN8-211ENST00000636934 CYTH2Q99418 400 aa19.27■□□□□ 0.67
CLN8-211ENST00000636934 HNRNPABQ99729 332 aaKnown RBP19.27■□□□□ 0.67
CLN8-211ENST00000636934 B3GNT5Q9BYG0 378 aa19.27■□□□□ 0.67
CLN8-211ENST00000636934 RAB6CQ9H0N0 254 aa19.27■□□□□ 0.67
CLN8-211ENST00000636934 RNF39Q9H2S5 420 aa19.27■□□□□ 0.67
CLN8-211ENST00000636934 NRDE2Q9H7Z3 1164 aa19.27■□□□□ 0.67
CLN8-211ENST00000636934 USP29Q9HBJ7 922 aa19.27■□□□□ 0.67
CLN8-211ENST00000636934 USP15Q9Y4E8 981 aaPredicted RBP19.27■□□□□ 0.67
CLN8-211ENST00000636934 HEY1Q9Y5J3 304 aa19.27■□□□□ 0.67
CLN8-211ENST00000636934 RPLP2P05387 115 aaKnown RBP19.26■□□□□ 0.67
CLN8-211ENST00000636934 CYP2F1P24903 491 aa19.26■□□□□ 0.67
CLN8-211ENST00000636934 LMO2P25791 158 aa19.26■□□□□ 0.67
CLN8-211ENST00000636934 MSH2P43246 934 aa19.26■□□□□ 0.67
CLN8-211ENST00000636934 ZNF157P51786 506 aaPredicted RBP19.26■□□□□ 0.67
CLN8-211ENST00000636934 LILRA4P59901 499 aa19.26■□□□□ 0.67
CLN8-211ENST00000636934 ZNF200P98182 395 aaPredicted RBP19.26■□□□□ 0.67
CLN8-211ENST00000636934 PURAQ00577 322 aaKnown RBP19.26■□□□□ 0.67
CLN8-211ENST00000636934 MSS51Q4VC12 460 aa19.26■□□□□ 0.67
CLN8-211ENST00000636934 PPP6R3Q5H9R7 873 aaPredicted RBP19.26■□□□□ 0.67
CLN8-211ENST00000636934 B3GALNT2Q8NCR0 500 aa19.26■□□□□ 0.67
CLN8-211ENST00000636934 GDAP1Q8TB36 358 aa19.26■□□□□ 0.67
CLN8-211ENST00000636934 PPP1R13LQ8WUF5 828 aa19.26■□□□□ 0.67
CLN8-211ENST00000636934 OSBPL7Q9BZF2 842 aa19.26■□□□□ 0.67
CLN8-211ENST00000636934 RCOR3Q9P2K3 495 aaPredicted RBP19.26■□□□□ 0.67
CLN8-211ENST00000636934 GJD2Q9UKL4 321 aa19.26■□□□□ 0.67
CLN8-211ENST00000636934 TCRBV7S3A2A0A539 114 aa19.25■□□□□ 0.67
CLN8-211ENST00000636934 GSTA1P08263 222 aa19.25■□□□□ 0.67
CLN8-211ENST00000636934 L1CAMP32004 1257 aa19.25■□□□□ 0.67
CLN8-211ENST00000636934 MAGEA6P43360 314 aa19.25■□□□□ 0.67
CLN8-211ENST00000636934 INHBEP58166 350 aa19.25■□□□□ 0.67
CLN8-211ENST00000636934 MRPS6P82932 125 aaKnown RBP19.25■□□□□ 0.67
CLN8-211ENST00000636934 PKN2Q16513 984 aaKnown RBP19.25■□□□□ 0.67
CLN8-211ENST00000636934 ADGRD1Q6QNK2 874 aa19.25■□□□□ 0.67
CLN8-211ENST00000636934 BZW1Q7L1Q6 419 aaKnown RBP19.25■□□□□ 0.67
CLN8-211ENST00000636934 FBF1Q8TES7 1133 aa19.25■□□□□ 0.67
CLN8-211ENST00000636934 ALKBH8Q96BT7 664 aaKnown RBP19.25■□□□□ 0.67
CLN8-211ENST00000636934 DHRS4Q9BTZ2 278 aa19.25■□□□□ 0.67
CLN8-211ENST00000636934 DUSP16Q9BY84 665 aa19.25■□□□□ 0.67
CLN8-211ENST00000636934 DHX35Q9H5Z1 703 aaKnown RBP19.25■□□□□ 0.67
CLN8-211ENST00000636934 RAB6BQ9NRW1 208 aa19.25■□□□□ 0.67
CLN8-211ENST00000636934 AP4E1Q9UPM8 1137 aa19.25■□□□□ 0.67
CLN8-211ENST00000636934 TNPO2O14787 897 aaKnown RBP19.24■□□□□ 0.67
CLN8-211ENST00000636934 DUSP11O75319 330 aaKnown RBP19.24■□□□□ 0.67
CLN8-211ENST00000636934 BANF1O75531 89 aa19.24■□□□□ 0.67
CLN8-211ENST00000636934 OAS1P00973 400 aaKnown RBP19.24■□□□□ 0.67
CLN8-211ENST00000636934 SSTR1P30872 391 aa19.24■□□□□ 0.67
CLN8-211ENST00000636934 MATKP42679 507 aa19.24■□□□□ 0.67
CLN8-211ENST00000636934 SOX4Q06945 474 aaPredicted RBP19.24■□□□□ 0.67
CLN8-211ENST00000636934 CA9Q16790 459 aa19.24■□□□□ 0.67
CLN8-211ENST00000636934 CST9Q5W186 159 aa19.24■□□□□ 0.67
CLN8-211ENST00000636934 FAM228AQ86W67 206 aa19.24■□□□□ 0.67
CLN8-211ENST00000636934 MTG1Q9BT17 334 aaPredicted RBP19.24■□□□□ 0.67
CLN8-211ENST00000636934 ZFYVE28Q9HCC9 887 aa19.24■□□□□ 0.67
CLN8-211ENST00000636934 FGFR1OP2Q9NVK5 253 aa19.24■□□□□ 0.67
CLN8-211ENST00000636934 GTF2IRD1Q9UHL9 959 aa19.24■□□□□ 0.67
CLN8-211ENST00000636934 TRPV2Q9Y5S1 764 aa19.24■□□□□ 0.67
CLN8-211ENST00000636934 FOXO6A8MYZ6 492 aa19.24■□□□□ 0.67
CLN8-211ENST00000636934 CYB561D2O14569 222 aa19.24■□□□□ 0.67
CLN8-211ENST00000636934 DAB1O75553 588 aa19.24■□□□□ 0.67
CLN8-211ENST00000636934 ZNF189O75820 626 aaPredicted RBP19.24■□□□□ 0.67
CLN8-211ENST00000636934 ZWINTO95229 277 aa19.24■□□□□ 0.67
CLN8-211ENST00000636934 GAD2Q05329 585 aa19.24■□□□□ 0.67
CLN8-211ENST00000636934 SLC45A4Q5BKX6 768 aa19.24■□□□□ 0.67
CLN8-211ENST00000636934 CNPY4Q8N129 248 aa19.24■□□□□ 0.67
CLN8-211ENST00000636934 TAB3Q8N5C8 712 aaPredicted RBP19.24■□□□□ 0.67
CLN8-211ENST00000636934 DENND1AQ8TEH3 1009 aa19.24■□□□□ 0.67
CLN8-211ENST00000636934 KCTD13Q8WZ19 329 aa19.24■□□□□ 0.67
CLN8-211ENST00000636934 PPP1R10Q96QC0 940 aaKnown RBP19.24■□□□□ 0.67
CLN8-211ENST00000636934 PAFAH2Q99487 392 aa19.24■□□□□ 0.67
CLN8-211ENST00000636934 LPIN3Q9BQK8 851 aa19.24■□□□□ 0.67
CLN8-211ENST00000636934 MLXIPLQ9NP71 852 aa19.24■□□□□ 0.67
CLN8-211ENST00000636934 IKBKGQ9Y6K9 419 aa19.24■□□□□ 0.67
CLN8-211ENST00000636934 ASMTLO95671 621 aa19.23■□□□□ 0.67
CLN8-211ENST00000636934 IGHA2P01877 340 aa19.23■□□□□ 0.67
CLN8-211ENST00000636934 GSTA2P09210 222 aa19.23■□□□□ 0.67
CLN8-211ENST00000636934 RBL1P28749 1068 aa19.23■□□□□ 0.67
CLN8-211ENST00000636934 ARL4AP40617 200 aa19.23■□□□□ 0.67
CLN8-211ENST00000636934 SLC25A52Q3SY17 297 aa19.23■□□□□ 0.67
CLN8-211ENST00000636934 RGS9BPQ6ZS82 235 aa19.23■□□□□ 0.67
CLN8-211ENST00000636934 TRPM8Q7Z2W7 1104 aa19.23■□□□□ 0.67
CLN8-211ENST00000636934 SPATA21Q7Z572 469 aa19.23■□□□□ 0.67
CLN8-211ENST00000636934 GBP7Q8N8V2 638 aaPredicted RBP19.23■□□□□ 0.67
CLN8-211ENST00000636934 MCUQ8NE86 351 aa19.23■□□□□ 0.67
CLN8-211ENST00000636934 CLEC4CQ8WTT0 213 aa19.23■□□□□ 0.67
CLN8-211ENST00000636934 LRRC39Q96DD0 335 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms