RNA–Protein interactions for RNA: ENST00000636876.1

CLN6-216, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 655 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-216ENST00000636876 SLC6A3Q01959 620 aa16.77■□□□□ 0.28
CLN6-216ENST00000636876 ZNF268Q14587 947 aaPredicted RBP16.77■□□□□ 0.28
CLN6-216ENST00000636876 SLC18A3Q16572 532 aa16.77■□□□□ 0.28
CLN6-216ENST00000636876 BTBD8Q5XKL5 378 aa16.77■□□□□ 0.28
CLN6-216ENST00000636876 ALKBH5Q6P6C2 394 aaKnown RBP16.77■□□□□ 0.28
CLN6-216ENST00000636876 TOGARAM2Q6ZUX3 1019 aa16.77■□□□□ 0.28
CLN6-216ENST00000636876 HFE2Q6ZVN8 426 aa16.77■□□□□ 0.28
CLN6-216ENST00000636876 SLC26A9Q7LBE3 791 aa16.77■□□□□ 0.28
CLN6-216ENST00000636876 MCOLN2Q8IZK6 566 aa16.77■□□□□ 0.28
CLN6-216ENST00000636876 ZNF276Q8N554 614 aa16.77■□□□□ 0.28
CLN6-216ENST00000636876 MAB21L3Q8N8X9 362 aa16.77■□□□□ 0.28
CLN6-216ENST00000636876 TDRD5Q8NAT2 981 aaKnown RBP16.77■□□□□ 0.28
CLN6-216ENST00000636876 GOLGA1Q92805 767 aa16.77■□□□□ 0.28
CLN6-216ENST00000636876 FAM149B1Q96BN6 582 aa16.77■□□□□ 0.28
CLN6-216ENST00000636876 ACSF2Q96CM8 615 aaPredicted RBP16.77■□□□□ 0.28
CLN6-216ENST00000636876 VCPIP1Q96JH7 1222 aa16.77■□□□□ 0.28
CLN6-216ENST00000636876 ZSWIM3Q96MP5 696 aa16.77■□□□□ 0.28
CLN6-216ENST00000636876 ISCUQ9H1K1 167 aa16.77■□□□□ 0.28
CLN6-216ENST00000636876 CCSER2Q9H7U1 834 aa16.77■□□□□ 0.28
CLN6-216ENST00000636876 ASNSD1Q9NWL6 643 aa16.77■□□□□ 0.28
CLN6-216ENST00000636876 WDR35Q9P2L0 1181 aa16.77■□□□□ 0.28
CLN6-216ENST00000636876 STRIP2Q9ULQ0 834 aa16.77■□□□□ 0.28
CLN6-216ENST00000636876 NR2E1Q9Y466 385 aa16.77■□□□□ 0.28
CLN6-216ENST00000636876 TRAV19A0A0A6YYK7 116 aa16.76■□□□□ 0.27
CLN6-216ENST00000636876 GLI1P08151 1106 aa16.76■□□□□ 0.27
CLN6-216ENST00000636876 RALAP11233 206 aa16.76■□□□□ 0.27
CLN6-216ENST00000636876 LAMP2P13473 410 aa16.76■□□□□ 0.27
CLN6-216ENST00000636876 SP100P23497 879 aaPredicted RBP16.76■□□□□ 0.27
CLN6-216ENST00000636876 GSCP56915 257 aaPredicted RBP16.76■□□□□ 0.27
CLN6-216ENST00000636876 TAF5Q15542 800 aa16.76■□□□□ 0.27
CLN6-216ENST00000636876 EFHC1Q5JVL4 640 aa16.76■□□□□ 0.27
CLN6-216ENST00000636876 CCDC122Q5T0U0 273 aa16.76■□□□□ 0.27
CLN6-216ENST00000636876 BEND5Q7L4P6 421 aa16.76■□□□□ 0.27
CLN6-216ENST00000636876 DNAAF5Q86Y56 855 aa16.76■□□□□ 0.27
CLN6-216ENST00000636876 TMTC1Q8IUR5 882 aa16.76■□□□□ 0.27
CLN6-216ENST00000636876 CMTM8Q8IZV2 173 aa16.76■□□□□ 0.27
CLN6-216ENST00000636876 ARL14EPQ8N8R7 260 aaPredicted RBP16.76■□□□□ 0.27
CLN6-216ENST00000636876 SLC22A12Q96S37 553 aa16.76■□□□□ 0.27
CLN6-216ENST00000636876 TRIM62Q9BVG3 475 aa16.76■□□□□ 0.27
CLN6-216ENST00000636876 ABCC13Q9NSE7 274 aa16.76■□□□□ 0.27
CLN6-216ENST00000636876 EPS15L1Q9UBC2 864 aa16.76■□□□□ 0.27
CLN6-216ENST00000636876 C2CD4DB7Z1M9 353 aa16.75■□□□□ 0.27
CLN6-216ENST00000636876 GOLGA8SH3BPF8 625 aa16.75■□□□□ 0.27
CLN6-216ENST00000636876 COCHO43405 550 aa16.75■□□□□ 0.27
CLN6-216ENST00000636876 HSF2BPO75031 334 aa16.75■□□□□ 0.27
CLN6-216ENST00000636876 OLFM2O95897 454 aa16.75■□□□□ 0.27
CLN6-216ENST00000636876 FYNP06241 537 aa16.75■□□□□ 0.27
CLN6-216ENST00000636876 CKMP06732 381 aa16.75■□□□□ 0.27
CLN6-216ENST00000636876 BMP1P13497 986 aa16.75■□□□□ 0.27
CLN6-216ENST00000636876 HDCP19113 662 aa16.75■□□□□ 0.27
CLN6-216ENST00000636876 WEE1P30291 646 aa16.75■□□□□ 0.27
CLN6-216ENST00000636876 YWHAZP63104 245 aaKnown RBP16.75■□□□□ 0.27
CLN6-216ENST00000636876 GFPT1Q06210 699 aaPredicted RBP16.75■□□□□ 0.27
CLN6-216ENST00000636876 C10orf120Q5SQS8 335 aa16.75■□□□□ 0.27
CLN6-216ENST00000636876 FAM102AQ5T9C2 384 aaPredicted RBP16.75■□□□□ 0.27
CLN6-216ENST00000636876 PHLDB2Q86SQ0 1253 aa16.75■□□□□ 0.27
CLN6-216ENST00000636876 TADA2BQ86TJ2 420 aa16.75■□□□□ 0.27
CLN6-216ENST00000636876 TMEM139Q8IV31 216 aa16.75■□□□□ 0.27
CLN6-216ENST00000636876 ADHFE1Q8IWW8 467 aa16.75■□□□□ 0.27
CLN6-216ENST00000636876 CCDC170Q8IYT3 715 aa16.75■□□□□ 0.27
CLN6-216ENST00000636876 ZSCAN18Q8TBC5 510 aaPredicted RBP16.75■□□□□ 0.27
CLN6-216ENST00000636876 EDEM1Q92611 657 aa16.75■□□□□ 0.27
CLN6-216ENST00000636876 SMARCD2Q92925 531 aa16.75■□□□□ 0.27
CLN6-216ENST00000636876 KHSRPQ92945 711 aaKnown RBP eCLIP16.75■□□□□ 0.278e-8■□□□□ 8.3
CLN6-216ENST00000636876 TRIM11Q96F44 468 aa16.75■□□□□ 0.27
CLN6-216ENST00000636876 PDLIM2Q96JY6 352 aa16.75■□□□□ 0.27
CLN6-216ENST00000636876 RPGRIP1Q96KN7 1286 aa16.75■□□□□ 0.27
CLN6-216ENST00000636876 ASB16Q96NS5 453 aa16.75■□□□□ 0.27
CLN6-216ENST00000636876 NECAB3Q96P71 396 aaPredicted RBP16.75■□□□□ 0.27
CLN6-216ENST00000636876 SLC2A13Q96QE2 648 aa16.75■□□□□ 0.27
CLN6-216ENST00000636876 CYP2S1Q96SQ9 504 aa16.75■□□□□ 0.27
CLN6-216ENST00000636876 CDK5RAP1Q96SZ6 601 aaKnown RBP16.75■□□□□ 0.27
CLN6-216ENST00000636876 UHRF1Q96T88 793 aaPredicted RBP16.75■□□□□ 0.27
CLN6-216ENST00000636876 BAG1Q99933 345 aaPredicted RBP16.75■□□□□ 0.27
CLN6-216ENST00000636876 RNF38Q9H0F5 515 aa16.75■□□□□ 0.27
CLN6-216ENST00000636876 TRPV4Q9HBA0 871 aa16.75■□□□□ 0.27
CLN6-216ENST00000636876 POPDC2Q9HBU9 364 aa16.75■□□□□ 0.27
CLN6-216ENST00000636876 SPTLC3Q9NUV7 552 aa16.75■□□□□ 0.27
CLN6-216ENST00000636876 PRKAG3Q9UGI9 489 aa16.75■□□□□ 0.27
CLN6-216ENST00000636876 LOC730098B7Z3J9 87 aa16.74■□□□□ 0.27
CLN6-216ENST00000636876 GRAP2O75791 330 aa16.74■□□□□ 0.27
CLN6-216ENST00000636876 TBX18O95935 607 aa16.74■□□□□ 0.27
CLN6-216ENST00000636876 AVPR1AP37288 418 aa16.74■□□□□ 0.27
CLN6-216ENST00000636876 SLC7A9P82251 487 aa16.74■□□□□ 0.27
CLN6-216ENST00000636876 FAM78AQ5JUQ0 283 aa16.74■□□□□ 0.27
CLN6-216ENST00000636876 MSANTD2Q6P1R3 559 aa16.74■□□□□ 0.27
CLN6-216ENST00000636876 KLHDC10Q6PID8 442 aa16.74■□□□□ 0.27
CLN6-216ENST00000636876 RSRC2Q7L4I2 434 aaKnown RBP16.74■□□□□ 0.27
CLN6-216ENST00000636876 ARID3BQ8IVW6 561 aaPredicted RBP16.74■□□□□ 0.27
CLN6-216ENST00000636876 ZDHHC14Q8IZN3 488 aa16.74■□□□□ 0.27
CLN6-216ENST00000636876 PLCD3Q8N3E9 789 aa16.74■□□□□ 0.27
CLN6-216ENST00000636876 C3orf20Q8ND61 904 aa16.74■□□□□ 0.27
CLN6-216ENST00000636876 RNF139Q8WU17 664 aa16.74■□□□□ 0.27
CLN6-216ENST00000636876 OLA1Q9NTK5 396 aaKnown RBP16.74■□□□□ 0.27
CLN6-216ENST00000636876 RAPGEFL1Q9UHV5 662 aa16.74■□□□□ 0.27
CLN6-216ENST00000636876 NUDT5Q9UKK9 219 aa16.74■□□□□ 0.27
CLN6-216ENST00000636876 NUP210Q8TEM1 1887 aaPredicted RBP16.73■□□□□ 0.27
CLN6-216ENST00000636876 TCRBV5S1A1TA0A578 114 aa16.73■□□□□ 0.27
CLN6-216ENST00000636876 SOWAHDA6NJG2 315 aa16.73■□□□□ 0.27
CLN6-216ENST00000636876 MDM4O15151 490 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms