RNA–Protein interactions for RNA: ENST00000636022.1

CACNA1A-222, Transcript of calcium voltage-gated channel subunit alpha1 A, human

TSL 3

Gene CACNA1A, Length 552 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1A-222	ENST00000636022	CYP26A1	O43174	497 aa		7.73	□□□□□ -1.17
CACNA1A-222	ENST00000636022	HOXC11	O43248	304 aa	Predicted RBP	7.73	□□□□□ -1.17
CACNA1A-222	ENST00000636022	TLR5	O60602	858 aa		7.73	□□□□□ -1.17
CACNA1A-222	ENST00000636022	CILP	O75339	1184 aa		7.73	□□□□□ -1.17
CACNA1A-222	ENST00000636022	CLSTN1	O94985	981 aa		7.73	□□□□□ -1.17
CACNA1A-222	ENST00000636022	FAM200B	P0CF97	657 aa		7.73	□□□□□ -1.17
CACNA1A-222	ENST00000636022	ADORA2B	P29275	332 aa		7.73	□□□□□ -1.17
CACNA1A-222	ENST00000636022	GTF2H1	P32780	548 aa		7.73	□□□□□ -1.17
CACNA1A-222	ENST00000636022	PSMC2	P35998	433 aa	Known RBP	7.73	□□□□□ -1.17
CACNA1A-222	ENST00000636022	GRIA2	P42262	883 aa		7.73	□□□□□ -1.17
CACNA1A-222	ENST00000636022	TNFRSF4	P43489	277 aa		7.73	□□□□□ -1.17
CACNA1A-222	ENST00000636022	KIF11	P52732	1056 aa		7.73	□□□□□ -1.17
CACNA1A-222	ENST00000636022	SF3A2	Q15428	464 aa	Known RBP	7.73	□□□□□ -1.17
CACNA1A-222	ENST00000636022	CCDC6	Q16204	474 aa		7.73	□□□□□ -1.17
CACNA1A-222	ENST00000636022	CRY1	Q16526	586 aa		7.73	□□□□□ -1.17
CACNA1A-222	ENST00000636022	KRT39	Q6A163	491 aa		7.73	□□□□□ -1.17
CACNA1A-222	ENST00000636022	TMEM92	Q6UXU6	159 aa		7.73	□□□□□ -1.17
CACNA1A-222	ENST00000636022	HTR3D	Q70Z44	454 aa		7.73	□□□□□ -1.17
CACNA1A-222	ENST00000636022	TMEM25	Q86YD3	366 aa		7.73	□□□□□ -1.17
CACNA1A-222	ENST00000636022	BBS7	Q8IWZ6	715 aa		7.73	□□□□□ -1.17
CACNA1A-222	ENST00000636022	SMYD4	Q8IYR2	804 aa	Predicted RBP	7.73	□□□□□ -1.17
CACNA1A-222	ENST00000636022	CCDC33	Q8N5R6	958 aa		7.73	□□□□□ -1.17
CACNA1A-222	ENST00000636022	IL17RC	Q8NAC3	791 aa		7.73	□□□□□ -1.17
CACNA1A-222	ENST00000636022	ENGASE	Q8NFI3	743 aa		7.73	□□□□□ -1.17
CACNA1A-222	ENST00000636022	TSTD1	Q8NFU3	115 aa		7.73	□□□□□ -1.17
CACNA1A-222	ENST00000636022	OLIG1	Q8TAK6	271 aa		7.73	□□□□□ -1.17
CACNA1A-222	ENST00000636022	SPATA20	Q8TB22	786 aa		7.73	□□□□□ -1.17
CACNA1A-222	ENST00000636022	SEMA4D	Q92854	862 aa		7.73	□□□□□ -1.17
CACNA1A-222	ENST00000636022	CCDC47	Q96A33	483 aa	Known RBP	7.73	□□□□□ -1.17
CACNA1A-222	ENST00000636022	CYFIP2	Q96F07	1278 aa		7.73	□□□□□ -1.17
CACNA1A-222	ENST00000636022	EEF2KMT	Q96G04	330 aa		7.73	□□□□□ -1.17
CACNA1A-222	ENST00000636022	CNOT6L	Q96LI5	555 aa	Known RBP	7.73	□□□□□ -1.17
CACNA1A-222	ENST00000636022	NT5C1A	Q9BXI3	368 aa		7.73	□□□□□ -1.17
CACNA1A-222	ENST00000636022	NMUR1	Q9HB89	426 aa		7.73	□□□□□ -1.17
CACNA1A-222	ENST00000636022	PNPLA8	Q9NP80	782 aa		7.73	□□□□□ -1.17
CACNA1A-222	ENST00000636022	CYLD	Q9NQC7	956 aa		7.73	□□□□□ -1.17
CACNA1A-222	ENST00000636022	ARHGEF4	Q9NR80	690 aa		7.73	□□□□□ -1.17
CACNA1A-222	ENST00000636022	RXFP3	Q9NSD7	469 aa		7.73	□□□□□ -1.17
CACNA1A-222	ENST00000636022	HCN2	Q9UL51	889 aa		7.73	□□□□□ -1.17
CACNA1A-222	ENST00000636022	KNL1	Q8NG31	2342 aa		7.73	□□□□□ -1.17
CACNA1A-222	ENST00000636022	FREM2	Q5SZK8	3169 aa		7.73	□□□□□ -1.17
CACNA1A-222	ENST00000636022	ANKRD11	Q6UB99	2663 aa	Predicted RBP	7.72	□□□□□ -1.17
CACNA1A-222	ENST00000636022	PALM2-AKAP2	B1ALY0	433 aa	Predicted RBP	7.72	□□□□□ -1.17
CACNA1A-222	ENST00000636022	SGK1	O00141	431 aa		7.72	□□□□□ -1.17
CACNA1A-222	ENST00000636022	TM4SF5	O14894	197 aa		7.72	□□□□□ -1.17
CACNA1A-222	ENST00000636022	TRIM24	O15164	1050 aa		7.72	□□□□□ -1.17
CACNA1A-222	ENST00000636022	ADAM23	O75077	832 aa		7.72	□□□□□ -1.17
CACNA1A-222	ENST00000636022	TULP3	O75386	442 aa		7.72	□□□□□ -1.17
CACNA1A-222	ENST00000636022	APOD	P05090	189 aa		7.72	□□□□□ -1.17
CACNA1A-222	ENST00000636022	KRT13	P13646	458 aa		7.72	□□□□□ -1.17
CACNA1A-222	ENST00000636022	CD58	P19256	250 aa		7.72	□□□□□ -1.17
CACNA1A-222	ENST00000636022	ACO1	P21399	889 aa	Known RBP	7.72	□□□□□ -1.17
CACNA1A-222	ENST00000636022	ATP5C1	P36542	298 aa	Known RBP	7.72	□□□□□ -1.17
CACNA1A-222	ENST00000636022	MPL	P40238	635 aa		7.72	□□□□□ -1.17
CACNA1A-222	ENST00000636022	DGKE	P52429	567 aa		7.72	□□□□□ -1.17
CACNA1A-222	ENST00000636022	LIMK1	P53667	647 aa		7.72	□□□□□ -1.17
CACNA1A-222	ENST00000636022	GAD2	Q05329	585 aa		7.72	□□□□□ -1.17
CACNA1A-222	ENST00000636022	KDSR	Q06136	332 aa		7.72	□□□□□ -1.17
CACNA1A-222	ENST00000636022	PNOC	Q13519	176 aa		7.72	□□□□□ -1.17
CACNA1A-222	ENST00000636022	HSF5	Q4G112	596 aa	Predicted RBP	7.72	□□□□□ -1.17
CACNA1A-222	ENST00000636022	COBLL1	Q53SF7	1204 aa		7.72	□□□□□ -1.17
CACNA1A-222	ENST00000636022	PPP1R26	Q5T8A7	1209 aa	Predicted RBP	7.72	□□□□□ -1.17
CACNA1A-222	ENST00000636022	EMC10	Q5UCC4	262 aa		7.72	□□□□□ -1.17
CACNA1A-222	ENST00000636022	ANO7	Q6IWH7	933 aa		7.72	□□□□□ -1.17
CACNA1A-222	ENST00000636022	KLHDC10	Q6PID8	442 aa		7.72	□□□□□ -1.17
CACNA1A-222	ENST00000636022	CCDC186	Q7Z3E2	898 aa		7.72	□□□□□ -1.17
CACNA1A-222	ENST00000636022	SCD5	Q86SK9	330 aa		7.72	□□□□□ -1.17
CACNA1A-222	ENST00000636022	ZC3H3	Q8IXZ2	948 aa	Known RBP	7.72	□□□□□ -1.17
CACNA1A-222	ENST00000636022	ZNF276	Q8N554	614 aa		7.72	□□□□□ -1.17
CACNA1A-222	ENST00000636022	ALLC	Q8N6M5	410 aa		7.72	□□□□□ -1.17
CACNA1A-222	ENST00000636022	SLC4A11	Q8NBS3	891 aa		7.72	□□□□□ -1.17
CACNA1A-222	ENST00000636022	TXNDC5	Q8NBS9	432 aa	Known RBP	7.72	□□□□□ -1.17
CACNA1A-222	ENST00000636022	MDGA1	Q8NFP4	955 aa		7.72	□□□□□ -1.17
CACNA1A-222	ENST00000636022	P2RY11	Q96G91	374 aa		7.72	□□□□□ -1.17
CACNA1A-222	ENST00000636022	FAXDC2	Q96IV6	333 aa		7.72	□□□□□ -1.17
CACNA1A-222	ENST00000636022	DUSP16	Q9BY84	665 aa		7.72	□□□□□ -1.17
CACNA1A-222	ENST00000636022	TPSD1	Q9BZJ3	242 aa		7.72	□□□□□ -1.17
CACNA1A-222	ENST00000636022	IMPG2	Q9BZV3	1241 aa		7.72	□□□□□ -1.17
CACNA1A-222	ENST00000636022	SMOC1	Q9H4F8	434 aa		7.72	□□□□□ -1.17
CACNA1A-222	ENST00000636022	TLR8	Q9NR97	1041 aa	Known RBP	7.72	□□□□□ -1.17
CACNA1A-222	ENST00000636022	SPHK2	Q9NRA0	654 aa		7.72	□□□□□ -1.17
CACNA1A-222	ENST00000636022	VPS45	Q9NRW7	570 aa		7.72	□□□□□ -1.17
CACNA1A-222	ENST00000636022	CISH	Q9NSE2	258 aa		7.72	□□□□□ -1.17
CACNA1A-222	ENST00000636022	SH3BP1	Q9Y3L3	701 aa		7.72	□□□□□ -1.17
CACNA1A-222	ENST00000636022	PCDHA5	Q9Y5H7	936 aa		7.72	□□□□□ -1.17
CACNA1A-222	ENST00000636022	USP3	Q9Y6I4	520 aa		7.72	□□□□□ -1.17
CACNA1A-222	ENST00000636022	PCNX2	A6NKB5	2137 aa		7.72	□□□□□ -1.17
CACNA1A-222	ENST00000636022	TNRC6B	Q9UPQ9	1833 aa	Known RBP	7.71	□□□□□ -1.17
CACNA1A-222	ENST00000636022	ZFYVE26	Q68DK2	2539 aa		7.71	□□□□□ -1.18
CACNA1A-222	ENST00000636022		A0A1W2PQH9	124 aa		7.71	□□□□□ -1.18
CACNA1A-222	ENST00000636022	BCLAF3	A2AJT9	711 aa	Known RBP	7.71	□□□□□ -1.18
CACNA1A-222	ENST00000636022	CETN3	O15182	167 aa		7.71	□□□□□ -1.18
CACNA1A-222	ENST00000636022	RHOBTB1	O94844	696 aa		7.71	□□□□□ -1.18
CACNA1A-222	ENST00000636022	KLF8	O95600	359 aa	Predicted RBP	7.71	□□□□□ -1.18
CACNA1A-222	ENST00000636022	ADRB1	P08588	477 aa		7.71	□□□□□ -1.18
CACNA1A-222	ENST00000636022	IRF1	P10914	325 aa		7.71	□□□□□ -1.18
CACNA1A-222	ENST00000636022	RARG	P13631	454 aa		7.71	□□□□□ -1.18
CACNA1A-222	ENST00000636022	BCKDHB	P21953	392 aa		7.71	□□□□□ -1.18
CACNA1A-222	ENST00000636022	P2RY2	P41231	377 aa		7.71	□□□□□ -1.18
CACNA1A-222	ENST00000636022	PRCP	P42785	496 aa		7.71	□□□□□ -1.18

Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms