RNA–Protein interactions for RNA: ENST00000635625.1

PTPN11-205, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene PTPN11, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-205ENST00000635625 FNBP1LQ5T0N5 605 aa12.89□□□□□ -0.35
PTPN11-205ENST00000635625 PPP1R26Q5T8A7 1209 aaPredicted RBP12.89□□□□□ -0.35
PTPN11-205ENST00000635625 HHATQ5VTY9 493 aa12.89□□□□□ -0.35
PTPN11-205ENST00000635625 ANKRD22Q5VYY1 191 aa12.89□□□□□ -0.35
PTPN11-205ENST00000635625 C9orf57Q5W0N0 161 aa12.89□□□□□ -0.35
PTPN11-205ENST00000635625 ICE2Q659A1 982 aa12.89□□□□□ -0.35
PTPN11-205ENST00000635625 CYB5D1Q6P9G0 228 aa12.89□□□□□ -0.35
PTPN11-205ENST00000635625 C3orf62Q6ZUJ4 267 aa12.89□□□□□ -0.35
PTPN11-205ENST00000635625 BZW1Q7L1Q6 419 aaKnown RBP12.89□□□□□ -0.35
PTPN11-205ENST00000635625 PLD5Q8N7P1 536 aa12.89□□□□□ -0.35
PTPN11-205ENST00000635625 CCDC63Q8NA47 563 aa12.89□□□□□ -0.35
PTPN11-205ENST00000635625 ANKRD52Q8NB46 1076 aa12.89□□□□□ -0.35
PTPN11-205ENST00000635625 MCUQ8NE86 351 aa12.89□□□□□ -0.35
PTPN11-205ENST00000635625 LRRC8CQ8TDW0 803 aa12.89□□□□□ -0.35
PTPN11-205ENST00000635625 FAM172AQ8WUF8 416 aa12.89□□□□□ -0.35
PTPN11-205ENST00000635625 CENPIQ92674 756 aaPredicted RBP12.89□□□□□ -0.35
PTPN11-205ENST00000635625 HSFY1Q96LI6 401 aa12.89□□□□□ -0.35
PTPN11-205ENST00000635625 PAFAH2Q99487 392 aa12.89□□□□□ -0.35
PTPN11-205ENST00000635625 EPAS1Q99814 870 aa12.89□□□□□ -0.35
PTPN11-205ENST00000635625 TRIM6Q9C030 488 aaPredicted RBP12.89□□□□□ -0.35
PTPN11-205ENST00000635625 PCDH18Q9HCL0 1135 aa12.89□□□□□ -0.35
PTPN11-205ENST00000635625 IKBKGQ9Y6K9 419 aa12.89□□□□□ -0.35
PTPN11-205ENST00000635625 TRIP11Q15643 1979 aa12.89□□□□□ -0.35
PTPN11-205ENST00000635625 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.89□□□□□ -0.35
PTPN11-205ENST00000635625 CSDE1O75534 798 aaKnown RBP12.89□□□□□ -0.35
PTPN11-205ENST00000635625 DCTN3O75935 186 aa12.89□□□□□ -0.35
PTPN11-205ENST00000635625 ALDH3A1P30838 453 aa12.89□□□□□ -0.35
PTPN11-205ENST00000635625 APLP1P51693 650 aa12.89□□□□□ -0.35
PTPN11-205ENST00000635625 RIPK1Q13546 671 aa12.89□□□□□ -0.35
PTPN11-205ENST00000635625 BBS9Q3SYG4 887 aa12.89□□□□□ -0.35
PTPN11-205ENST00000635625 SV2CQ496J9 727 aa12.89□□□□□ -0.35
PTPN11-205ENST00000635625 XKR4Q5GH76 650 aa12.89□□□□□ -0.35
PTPN11-205ENST00000635625 FBXO47Q5MNV8 452 aa12.89□□□□□ -0.35
PTPN11-205ENST00000635625 DPH6Q7L8W6 267 aa12.89□□□□□ -0.35
PTPN11-205ENST00000635625 TTC30AQ86WT1 665 aa12.89□□□□□ -0.35
PTPN11-205ENST00000635625 DNAJC5GQ8N7S2 189 aa12.89□□□□□ -0.35
PTPN11-205ENST00000635625 FBF1Q8TES7 1133 aa12.89□□□□□ -0.35
PTPN11-205ENST00000635625 BRI3BPQ8WY22 251 aa12.89□□□□□ -0.35
PTPN11-205ENST00000635625 PPP1R16BQ96T49 567 aa12.89□□□□□ -0.35
PTPN11-205ENST00000635625 MRPL45Q9BRJ2 306 aaKnown RBP12.89□□□□□ -0.35
PTPN11-205ENST00000635625 SNTG2Q9NY99 539 aa12.89□□□□□ -0.35
PTPN11-205ENST00000635625 SAE1Q9UBE0 346 aaPredicted RBP12.89□□□□□ -0.35
PTPN11-205ENST00000635625 SCN1AP35498 2009 aa12.89□□□□□ -0.35
PTPN11-205ENST00000635625 HACD1B0YJ81 288 aa12.88□□□□□ -0.35
PTPN11-205ENST00000635625 PIRO00625 290 aa12.88□□□□□ -0.35
PTPN11-205ENST00000635625 TRDMT1O14717 391 aaKnown RBP12.88□□□□□ -0.35
PTPN11-205ENST00000635625 CHUKO15111 745 aa12.88□□□□□ -0.35
PTPN11-205ENST00000635625 SMIM10L2AP0DMW4 78 aa12.88□□□□□ -0.35
PTPN11-205ENST00000635625 SMIM10L2BP0DMW5 78 aa12.88□□□□□ -0.35
PTPN11-205ENST00000635625 TPSB2P20231 275 aa12.88□□□□□ -0.35
PTPN11-205ENST00000635625 BNIP1Q12981 228 aa12.88□□□□□ -0.35
PTPN11-205ENST00000635625 SETDB1Q15047 1291 aa12.88□□□□□ -0.35
PTPN11-205ENST00000635625 TPSAB1Q15661 275 aa12.88□□□□□ -0.35
PTPN11-205ENST00000635625 SNCBQ16143 134 aa12.88□□□□□ -0.35
PTPN11-205ENST00000635625 SEPT7Q16181 437 aaKnown RBP12.88□□□□□ -0.35
PTPN11-205ENST00000635625 KIZQ2M2Z5 673 aa12.88□□□□□ -0.35
PTPN11-205ENST00000635625 SWT1Q5T5J6 900 aaKnown RBP12.88□□□□□ -0.35
PTPN11-205ENST00000635625 TRNP1Q6NT89 227 aa12.88□□□□□ -0.35
PTPN11-205ENST00000635625 PMF1Q6P1K2 205 aa12.88□□□□□ -0.35
PTPN11-205ENST00000635625 STRADAQ7RTN6 431 aa12.88□□□□□ -0.35
PTPN11-205ENST00000635625 LIMS2Q7Z4I7 341 aa12.88□□□□□ -0.35
PTPN11-205ENST00000635625 ACOT1Q86TX2 421 aa12.88□□□□□ -0.35
PTPN11-205ENST00000635625 ANKMY2Q8IV38 441 aa12.88□□□□□ -0.35
PTPN11-205ENST00000635625 PARP9Q8IXQ6 854 aa12.88□□□□□ -0.35
PTPN11-205ENST00000635625 ZDHHC16Q969W1 377 aa12.88□□□□□ -0.35
PTPN11-205ENST00000635625 TNIP3Q96KP6 325 aa12.88□□□□□ -0.35
PTPN11-205ENST00000635625 C11orf84Q9BUA3 381 aaPredicted RBP12.88□□□□□ -0.35
PTPN11-205ENST00000635625 SNRNP25Q9BV90 132 aaKnown RBP12.88□□□□□ -0.35
PTPN11-205ENST00000635625 VPS11Q9H270 941 aa12.88□□□□□ -0.35
PTPN11-205ENST00000635625 USP29Q9HBJ7 922 aa12.88□□□□□ -0.35
PTPN11-205ENST00000635625 NGRNQ9NPE2 291 aaKnown RBP12.88□□□□□ -0.35
PTPN11-205ENST00000635625 ZNF180Q9UJW8 692 aa12.88□□□□□ -0.35
PTPN11-205ENST00000635625 TEX264Q9Y6I9 313 aa12.88□□□□□ -0.35
PTPN11-205ENST00000635625 USH1CQ9Y6N9 552 aa12.88□□□□□ -0.35
PTPN11-205ENST00000635625 SF3B1O75533 1304 aaKnown RBP eCLIP12.88□□□□□ -0.354e-6■■■■■ 89
PTPN11-205ENST00000635625 GOLGA8MH3BSY2 632 aa12.87□□□□□ -0.35
PTPN11-205ENST00000635625 PAPSS1O43252 624 aaPredicted RBP12.87□□□□□ -0.35
PTPN11-205ENST00000635625 MGRN1O60291 552 aa12.87□□□□□ -0.35
PTPN11-205ENST00000635625 RECQL4O94761 1208 aa12.87□□□□□ -0.35
PTPN11-205ENST00000635625 CYP2C9P11712 490 aa12.87□□□□□ -0.35
PTPN11-205ENST00000635625 SLC8A1P32418 973 aa12.87□□□□□ -0.35
PTPN11-205ENST00000635625 SLC8A3P57103 927 aa12.87□□□□□ -0.35
PTPN11-205ENST00000635625 ZNF200P98182 395 aaPredicted RBP12.87□□□□□ -0.35
PTPN11-205ENST00000635625 TAF5Q15542 800 aa12.87□□□□□ -0.35
PTPN11-205ENST00000635625 SPRED3Q2MJR0 410 aa12.87□□□□□ -0.35
PTPN11-205ENST00000635625 C15orf59Q2T9L4 293 aaPredicted RBP12.87□□□□□ -0.35
PTPN11-205ENST00000635625 MSS51Q4VC12 460 aa12.87□□□□□ -0.35
PTPN11-205ENST00000635625 EFHC1Q5JVL4 640 aa12.87□□□□□ -0.35
PTPN11-205ENST00000635625 LGSNQ5TDP6 509 aa12.87□□□□□ -0.35
PTPN11-205ENST00000635625 FYB2Q5VWT5 728 aa12.87□□□□□ -0.35
PTPN11-205ENST00000635625 HACE1Q8IYU2 909 aa12.87□□□□□ -0.35
PTPN11-205ENST00000635625 NME8Q8N427 588 aa12.87□□□□□ -0.35
PTPN11-205ENST00000635625 PQLC3Q8N755 202 aa12.87□□□□□ -0.35
PTPN11-205ENST00000635625 OR6B3Q8NGW1 331 aa12.87□□□□□ -0.35
PTPN11-205ENST00000635625 MZB1Q8WU39 189 aa12.87□□□□□ -0.35
PTPN11-205ENST00000635625 DCAKDQ8WVC6 231 aa12.87□□□□□ -0.35
PTPN11-205ENST00000635625 SLC44A1Q8WWI5 657 aa12.87□□□□□ -0.35
PTPN11-205ENST00000635625 FERMT1Q9BQL6 677 aa12.87□□□□□ -0.35
PTPN11-205ENST00000635625 KATNAL1Q9BW62 490 aa12.87□□□□□ -0.35
PTPN11-205ENST00000635625 SNX25Q9H3E2 840 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms