RNA–Protein interactions for RNA: ENST00000634363.1

SNRNP48-203, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 781 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-203ENST00000634363 HNRNPLP14866 589 aaKnown RBP eCLIP16.47■□□□□ 0.23
SNRNP48-203ENST00000634363 GTF2H1P32780 548 aa16.47■□□□□ 0.23
SNRNP48-203ENST00000634363 CACNA2D1P54289 1103 aa16.47■□□□□ 0.23
SNRNP48-203ENST00000634363 MYL6P60660 151 aa16.47■□□□□ 0.23
SNRNP48-203ENST00000634363 KDSRQ06136 332 aa16.47■□□□□ 0.23
SNRNP48-203ENST00000634363 ZNF252P-AS1Q0IIN9 211 aa16.47■□□□□ 0.23
SNRNP48-203ENST00000634363 DPCR1Q3MIW9 517 aa16.47■□□□□ 0.23
SNRNP48-203ENST00000634363 C1orf220Q5T0J3 134 aa16.47■□□□□ 0.23
SNRNP48-203ENST00000634363 RHBDF2Q6PJF5 856 aa16.47■□□□□ 0.23
SNRNP48-203ENST00000634363 TMEFF1Q8IYR6 380 aa16.47■□□□□ 0.23
SNRNP48-203ENST00000634363 NAT16Q8N8M0 369 aa16.47■□□□□ 0.23
SNRNP48-203ENST00000634363 IL17RCQ8NAC3 791 aa16.47■□□□□ 0.23
SNRNP48-203ENST00000634363 CCDC150Q8NCX0 1101 aa16.47■□□□□ 0.23
SNRNP48-203ENST00000634363 HMGB4Q8WW32 186 aa16.47■□□□□ 0.23
SNRNP48-203ENST00000634363 IMPG2Q9BZV3 1241 aa16.47■□□□□ 0.23
SNRNP48-203ENST00000634363 DPEP3Q9H4B8 488 aa16.47■□□□□ 0.23
SNRNP48-203ENST00000634363 TMEM8AQ9HCN3 771 aa16.47■□□□□ 0.23
SNRNP48-203ENST00000634363 POLMQ9NP87 494 aaPredicted RBP16.47■□□□□ 0.23
SNRNP48-203ENST00000634363 NME7Q9Y5B8 376 aa16.47■□□□□ 0.23
SNRNP48-203ENST00000634363 A8MXQ7 604 aa16.46■□□□□ 0.23
SNRNP48-203ENST00000634363 C1QTNF9BB2RNN3 333 aa16.46■□□□□ 0.23
SNRNP48-203ENST00000634363 CDX4O14627 284 aaPredicted RBP16.46■□□□□ 0.23
SNRNP48-203ENST00000634363 ADH1CP00326 375 aa16.46■□□□□ 0.23
SNRNP48-203ENST00000634363 OAS1P00973 400 aaKnown RBP16.46■□□□□ 0.23
SNRNP48-203ENST00000634363 C1QTNF9P0C862 333 aa16.46■□□□□ 0.23
SNRNP48-203ENST00000634363 ADH5P11766 374 aa16.46■□□□□ 0.23
SNRNP48-203ENST00000634363 P4HA1P13674 534 aa16.46■□□□□ 0.23
SNRNP48-203ENST00000634363 YWHAQP27348 245 aa16.46■□□□□ 0.23
SNRNP48-203ENST00000634363 MXI1P50539 228 aa16.46■□□□□ 0.23
SNRNP48-203ENST00000634363 PPP3CAQ08209 521 aa16.46■□□□□ 0.23
SNRNP48-203ENST00000634363 TPD52L1Q16890 204 aaPredicted RBP16.46■□□□□ 0.23
SNRNP48-203ENST00000634363 ZNF667Q5HYK9 610 aa16.46■□□□□ 0.23
SNRNP48-203ENST00000634363 KRT39Q6A163 491 aa16.46■□□□□ 0.23
SNRNP48-203ENST00000634363 SASS6Q6UVJ0 657 aa16.46■□□□□ 0.23
SNRNP48-203ENST00000634363 RBM43Q6ZSC3 357 aaKnown RBP16.46■□□□□ 0.23
SNRNP48-203ENST00000634363 LPCAT2Q7L5N7 544 aa16.46■□□□□ 0.23
SNRNP48-203ENST00000634363 C12orf40Q86WS4 652 aa16.46■□□□□ 0.23
SNRNP48-203ENST00000634363 NUP93Q8N1F7 819 aa16.46■□□□□ 0.23
SNRNP48-203ENST00000634363 B3GNT5Q9BYG0 378 aa16.46■□□□□ 0.23
SNRNP48-203ENST00000634363 ZNF518BQ9C0D4 1074 aa16.46■□□□□ 0.23
SNRNP48-203ENST00000634363 ARHGEF4Q9NR80 690 aa16.46■□□□□ 0.23
SNRNP48-203ENST00000634363 TMEM30AQ9NV96 361 aa16.46■□□□□ 0.23
SNRNP48-203ENST00000634363 TBC1D3BA6NDS4 549 aa16.45■□□□□ 0.22
SNRNP48-203ENST00000634363 TACC1O75410 805 aa16.45■□□□□ 0.22
SNRNP48-203ENST00000634363 VNN1O95497 513 aa16.45■□□□□ 0.22
SNRNP48-203ENST00000634363 TOP3BO95985 862 aaKnown RBP16.45■□□□□ 0.22
SNRNP48-203ENST00000634363 HLA-DRAP01903 254 aa16.45■□□□□ 0.22
SNRNP48-203ENST00000634363 PROS1P07225 676 aa16.45■□□□□ 0.22
SNRNP48-203ENST00000634363 SGSM1Q2NKQ1 1148 aa16.45■□□□□ 0.22
SNRNP48-203ENST00000634363 TRIM61Q5EBN2 209 aa16.45■□□□□ 0.22
SNRNP48-203ENST00000634363 EOGTQ5NDL2 527 aa16.45■□□□□ 0.22
SNRNP48-203ENST00000634363 LY6G5CQ5SRR4 150 aa16.45■□□□□ 0.22
SNRNP48-203ENST00000634363 DDX42Q86XP3 938 aaKnown RBP eCLIP16.45■□□□□ 0.22
SNRNP48-203ENST00000634363 WHAMMQ8TF30 809 aa16.45■□□□□ 0.22
SNRNP48-203ENST00000634363 TAF4BQ92750 862 aa16.45■□□□□ 0.22
SNRNP48-203ENST00000634363 FBXO32Q969P5 355 aa16.45■□□□□ 0.22
SNRNP48-203ENST00000634363 SPACA7Q96KW9 195 aa16.45■□□□□ 0.22
SNRNP48-203ENST00000634363 KCNK16Q96T55 309 aa16.45■□□□□ 0.22
SNRNP48-203ENST00000634363 MED10Q9BTT4 135 aa16.45■□□□□ 0.22
SNRNP48-203ENST00000634363 SRRTQ9BXP5 876 aaKnown RBP16.45■□□□□ 0.22
SNRNP48-203ENST00000634363 NUSAP1Q9BXS6 441 aaKnown RBP16.45■□□□□ 0.22
SNRNP48-203ENST00000634363 ELOVL4Q9GZR5 314 aa16.45■□□□□ 0.22
SNRNP48-203ENST00000634363 XYLT2Q9H1B5 865 aa16.45■□□□□ 0.22
SNRNP48-203ENST00000634363 VRTNQ9H8Y1 702 aa16.45■□□□□ 0.22
SNRNP48-203ENST00000634363 TBC1D14Q9P2M4 693 aa16.45■□□□□ 0.22
SNRNP48-203ENST00000634363 CEP192Q8TEP8 1941 aa16.45■□□□□ 0.22
SNRNP48-203ENST00000634363 MYO18AQ92614 2054 aaKnown RBP16.44■□□□□ 0.22
SNRNP48-203ENST00000634363 TCRBV21S2A2A0A5A6 115 aa16.44■□□□□ 0.22
SNRNP48-203ENST00000634363 OLFM2O95897 454 aa16.44■□□□□ 0.22
SNRNP48-203ENST00000634363 CEACAM1P13688 526 aa16.44■□□□□ 0.22
SNRNP48-203ENST00000634363 ERCC5P28715 1186 aaPredicted RBP16.44■□□□□ 0.22
SNRNP48-203ENST00000634363 P2RY2P41231 377 aa16.44■□□□□ 0.22
SNRNP48-203ENST00000634363 GRIA2P42262 883 aa16.44■□□□□ 0.22
SNRNP48-203ENST00000634363 PTGER3P43115 390 aa16.44■□□□□ 0.22
SNRNP48-203ENST00000634363 TNFRSF4P43489 277 aa16.44■□□□□ 0.22
SNRNP48-203ENST00000634363 MAPK8P45983 427 aa16.44■□□□□ 0.22
SNRNP48-203ENST00000634363 CDH8P55286 799 aa16.44■□□□□ 0.22
SNRNP48-203ENST00000634363 ANO4Q32M45 955 aa16.44■□□□□ 0.22
SNRNP48-203ENST00000634363 BTBD8Q5XKL5 378 aa16.44■□□□□ 0.22
SNRNP48-203ENST00000634363 CAVIN1Q6NZI2 390 aaKnown RBP16.44■□□□□ 0.22
SNRNP48-203ENST00000634363 UNQ6494/PRO21346Q6UXR6 183 aa16.44■□□□□ 0.22
SNRNP48-203ENST00000634363 DEFB119Q8N690 84 aa16.44■□□□□ 0.22
SNRNP48-203ENST00000634363 B3GALNT2Q8NCR0 500 aa16.44■□□□□ 0.22
SNRNP48-203ENST00000634363 DEFB124Q8NES8 71 aa16.44■□□□□ 0.22
SNRNP48-203ENST00000634363 OLIG1Q8TAK6 271 aa16.44■□□□□ 0.22
SNRNP48-203ENST00000634363 TMEM74BQ9NUR3 256 aa16.44■□□□□ 0.22
SNRNP48-203ENST00000634363 SH3BP1Q9Y3L3 701 aa16.44■□□□□ 0.22
SNRNP48-203ENST00000634363 ADAMTS9Q9P2N4 1935 aa16.44■□□□□ 0.22
SNRNP48-203ENST00000634363 MYH10P35580 1976 aa16.44■□□□□ 0.22
SNRNP48-203ENST00000634363 E2F8A0AVK6 867 aa16.43■□□□□ 0.22
SNRNP48-203ENST00000634363 COCHO43405 550 aa16.43■□□□□ 0.22
SNRNP48-203ENST00000634363 RTN3O95197 1032 aaPredicted RBP16.43■□□□□ 0.22
SNRNP48-203ENST00000634363 ASS1P00966 412 aaKnown RBP16.43■□□□□ 0.22
SNRNP48-203ENST00000634363 FAM163BP0C2L3 166 aa16.43■□□□□ 0.22
SNRNP48-203ENST00000634363 IRF1P10914 325 aa16.43■□□□□ 0.22
SNRNP48-203ENST00000634363 EIF2DP41214 584 aaKnown RBP16.43■□□□□ 0.22
SNRNP48-203ENST00000634363 KIR2DL1P43626 348 aaPredicted RBP16.43■□□□□ 0.22
SNRNP48-203ENST00000634363 MCCD1P59942 119 aaPredicted RBP16.43■□□□□ 0.22
SNRNP48-203ENST00000634363 GAD2Q05329 585 aa16.43■□□□□ 0.22
SNRNP48-203ENST00000634363 LMAN2Q12907 356 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms