RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 ASAH2Q9NR71 780 aa5.17□□□□□ -1.58
LINC00550-201ENST00000629293 LIMA1Q9UHB6 759 aaKnown RBP5.17□□□□□ -1.58
LINC00550-201ENST00000629293 DNAI1Q9UI46 699 aa5.17□□□□□ -1.58
LINC00550-201ENST00000629293 FBXO4Q9UKT5 387 aa5.17□□□□□ -1.58
LINC00550-201ENST00000629293 PLAAQ9Y263 795 aa5.17□□□□□ -1.58
LINC00550-201ENST00000629293 ZFHX4Q86UP3 3567 aa5.17□□□□□ -1.58
LINC00550-201ENST00000629293 SLC16A4O15374 487 aa5.17□□□□□ -1.58
LINC00550-201ENST00000629293 TEX33O43247 280 aa5.17□□□□□ -1.58
LINC00550-201ENST00000629293 RFPL3O75679 317 aa5.17□□□□□ -1.58
LINC00550-201ENST00000629293 ECEL1O95672 775 aa5.17□□□□□ -1.58
LINC00550-201ENST00000629293 ESRRAP11474 423 aaPredicted RBP5.17□□□□□ -1.58
LINC00550-201ENST00000629293 PSMC3P17980 439 aa5.17□□□□□ -1.58
LINC00550-201ENST00000629293 CYP11B2P19099 503 aa5.17□□□□□ -1.58
LINC00550-201ENST00000629293 GUCY2CP25092 1073 aa5.17□□□□□ -1.58
LINC00550-201ENST00000629293 ARNTP27540 789 aa5.17□□□□□ -1.58
LINC00550-201ENST00000629293 NAMPTP43490 491 aa5.17□□□□□ -1.58
LINC00550-201ENST00000629293 CXCL12P48061 93 aa5.17□□□□□ -1.58
LINC00550-201ENST00000629293 GUCY2FP51841 1108 aa5.17□□□□□ -1.58
LINC00550-201ENST00000629293 ADKP55263 362 aaKnown RBP5.17□□□□□ -1.58
LINC00550-201ENST00000629293 SATB1Q01826 763 aa5.17□□□□□ -1.58
LINC00550-201ENST00000629293 POU5F1BQ06416 359 aa5.17□□□□□ -1.58
LINC00550-201ENST00000629293 DMWDQ09019 674 aa5.17□□□□□ -1.58
LINC00550-201ENST00000629293 PPP2R5DQ14738 602 aa5.17□□□□□ -1.58
LINC00550-201ENST00000629293 TCEA2Q15560 299 aa5.17□□□□□ -1.58
LINC00550-201ENST00000629293 TEAD2Q15562 447 aa5.17□□□□□ -1.58
LINC00550-201ENST00000629293 STXBP5Q5T5C0 1151 aa5.17□□□□□ -1.58
LINC00550-201ENST00000629293 PDXDC1Q6P996 788 aa5.17□□□□□ -1.58
LINC00550-201ENST00000629293 SMYD4Q8IYR2 804 aaPredicted RBP5.17□□□□□ -1.58
LINC00550-201ENST00000629293 SYNPOQ8N3V7 929 aa5.17□□□□□ -1.58
LINC00550-201ENST00000629293 ZNF513Q8N8E2 541 aaPredicted RBP5.17□□□□□ -1.58
LINC00550-201ENST00000629293 CSGALNACT1Q8TDX6 532 aa5.17□□□□□ -1.58
LINC00550-201ENST00000629293 TM9SF2Q99805 663 aa5.17□□□□□ -1.58
LINC00550-201ENST00000629293 CDT1Q9H211 546 aa5.17□□□□□ -1.58
LINC00550-201ENST00000629293 ZHX3Q9H4I2 956 aa5.17□□□□□ -1.58
LINC00550-201ENST00000629293 GTSE1Q9NYZ3 720 aa5.17□□□□□ -1.58
LINC00550-201ENST00000629293 GDE1Q9NZC3 331 aa5.17□□□□□ -1.58
LINC00550-201ENST00000629293 OGFRQ9NZT2 677 aa5.17□□□□□ -1.58
LINC00550-201ENST00000629293 LRWD1Q9UFC0 647 aa5.17□□□□□ -1.58
LINC00550-201ENST00000629293 GPN3Q9UHW5 284 aaPredicted RBP5.17□□□□□ -1.58
LINC00550-201ENST00000629293 KLF15Q9UIH9 416 aa5.17□□□□□ -1.58
LINC00550-201ENST00000629293 RWDD2AQ9UIY3 292 aa5.17□□□□□ -1.58
LINC00550-201ENST00000629293 FBXL5Q9UKA1 691 aa5.17□□□□□ -1.58
LINC00550-201ENST00000629293 INSL5Q9Y5Q6 135 aa5.17□□□□□ -1.58
LINC00550-201ENST00000629293 PP2D1A8MPX8 630 aa5.17□□□□□ -1.58
LINC00550-201ENST00000629293 AKR1B15C9JRZ8 316 aaPredicted RBP5.17□□□□□ -1.58
LINC00550-201ENST00000629293 E9PMD0 336 aa5.17□□□□□ -1.58
LINC00550-201ENST00000629293 AXIN1O15169 862 aa5.17□□□□□ -1.58
LINC00550-201ENST00000629293 MFAP3LO75121 409 aa5.17□□□□□ -1.58
LINC00550-201ENST00000629293 TADA3O75528 432 aa5.17□□□□□ -1.58
LINC00550-201ENST00000629293 LYPLA2O95372 231 aa5.17□□□□□ -1.58
LINC00550-201ENST00000629293 EFEMP2O95967 443 aa5.17□□□□□ -1.58
LINC00550-201ENST00000629293 S100BP04271 92 aaPredicted RBP5.17□□□□□ -1.58
LINC00550-201ENST00000629293 OR52Z1P0C646 297 aa5.17□□□□□ -1.58
LINC00550-201ENST00000629293 FGFR3P22607 806 aa5.17□□□□□ -1.58
LINC00550-201ENST00000629293 PRPHP41219 470 aa5.17□□□□□ -1.58
LINC00550-201ENST00000629293 DUSP4Q13115 394 aa5.17□□□□□ -1.58
LINC00550-201ENST00000629293 DMP1Q13316 513 aaPredicted RBP5.17□□□□□ -1.58
LINC00550-201ENST00000629293 UPP1Q16831 310 aa5.17□□□□□ -1.58
LINC00550-201ENST00000629293 ST3GAL2Q16842 350 aa5.17□□□□□ -1.58
LINC00550-201ENST00000629293 DCAF4L1Q3SXM0 396 aa5.17□□□□□ -1.58
LINC00550-201ENST00000629293 ZNF658Q5TYW1 1059 aaPredicted RBP5.17□□□□□ -1.58
LINC00550-201ENST00000629293 HGSNATQ68CP4 663 aa5.17□□□□□ -1.58
LINC00550-201ENST00000629293 IL31Q6EBC2 164 aa5.17□□□□□ -1.58
LINC00550-201ENST00000629293 ZNF280DQ6N043 979 aa5.17□□□□□ -1.58
LINC00550-201ENST00000629293 APBB1IPQ7Z5R6 666 aaPredicted RBP5.17□□□□□ -1.58
LINC00550-201ENST00000629293 SMARCD2Q92925 531 aa5.17□□□□□ -1.58
LINC00550-201ENST00000629293 ZMAT2Q96NC0 199 aaKnown RBP5.17□□□□□ -1.58
LINC00550-201ENST00000629293 ACAP3Q96P50 834 aa5.17□□□□□ -1.58
LINC00550-201ENST00000629293 NAA15Q9BXJ9 866 aaKnown RBP5.17□□□□□ -1.58
LINC00550-201ENST00000629293 SMG9Q9H0W8 520 aaKnown RBP5.17□□□□□ -1.58
LINC00550-201ENST00000629293 KMT5AQ9NQR1 393 aa5.17□□□□□ -1.58
LINC00550-201ENST00000629293 MARK1Q9P0L2 795 aa5.17□□□□□ -1.58
LINC00550-201ENST00000629293 CTNND2Q9UQB3 1225 aa5.17□□□□□ -1.58
LINC00550-201ENST00000629293 TRIP11Q15643 1979 aa5.17□□□□□ -1.58
LINC00550-201ENST00000629293 KMT2BQ9UMN6 2715 aaPredicted RBP5.17□□□□□ -1.58
LINC00550-201ENST00000629293 CABIN1Q9Y6J0 2220 aa5.16□□□□□ -1.58
LINC00550-201ENST00000629293 HEPACAM2A8MVW5 462 aa5.16□□□□□ -1.58
LINC00550-201ENST00000629293 LAD1O00515 517 aa5.16□□□□□ -1.58
LINC00550-201ENST00000629293 ZNF197O14709 1029 aa5.16□□□□□ -1.58
LINC00550-201ENST00000629293 GYPCP04921 128 aa5.16□□□□□ -1.58
LINC00550-201ENST00000629293 ATF2P15336 505 aa5.16□□□□□ -1.58
LINC00550-201ENST00000629293 HOXA9P31269 272 aa5.16□□□□□ -1.58
LINC00550-201ENST00000629293 EFNA5P52803 228 aa5.16□□□□□ -1.58
LINC00550-201ENST00000629293 STX17P56962 302 aa5.16□□□□□ -1.58
LINC00550-201ENST00000629293 TNK2Q07912 1038 aa5.16□□□□□ -1.58
LINC00550-201ENST00000629293 PCDH1Q08174 1060 aa5.16□□□□□ -1.58
LINC00550-201ENST00000629293 PAK1Q13153 545 aa5.16□□□□□ -1.58
LINC00550-201ENST00000629293 KCNB1Q14721 858 aa5.16□□□□□ -1.58
LINC00550-201ENST00000629293 NAB2Q15742 525 aa5.16□□□□□ -1.58
LINC00550-201ENST00000629293 LONRF2Q1L5Z9 754 aa5.16□□□□□ -1.58
LINC00550-201ENST00000629293 SLC10A6Q3KNW5 377 aa5.16□□□□□ -1.58
LINC00550-201ENST00000629293 AASDHQ4L235 1098 aaPredicted RBP5.16□□□□□ -1.58
LINC00550-201ENST00000629293 HAUS3Q68CZ6 603 aa5.16□□□□□ -1.58
LINC00550-201ENST00000629293 VITQ6UXI7 678 aa5.16□□□□□ -1.58
LINC00550-201ENST00000629293 TTC30AQ86WT1 665 aa5.16□□□□□ -1.58
LINC00550-201ENST00000629293 ATAD1Q8NBU5 361 aa5.16□□□□□ -1.58
LINC00550-201ENST00000629293 ZBTB44Q8NCP5 570 aa5.16□□□□□ -1.58
LINC00550-201ENST00000629293 LRRC15Q8TF66 581 aa5.16□□□□□ -1.58
LINC00550-201ENST00000629293 BHMTQ93088 406 aa5.16□□□□□ -1.58
LINC00550-201ENST00000629293 SGSM3Q96HU1 749 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms