RNA–Protein interactions for RNA: ENST00000628857.1

CNOT1-223, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 5 BASIC

Gene CNOT1, Length 291 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-223ENST00000628857 ACOX1Q15067 660 aa3.61□□□□□ -1.83
CNOT1-223ENST00000628857 RNASE12Q5GAN4 147 aaKnown RBP3.61□□□□□ -1.83
CNOT1-223ENST00000628857 L1TD1Q5T7N2 865 aaKnown RBP3.61□□□□□ -1.83
CNOT1-223ENST00000628857 PRAMEF17Q5VTA0 474 aa3.61□□□□□ -1.83
CNOT1-223ENST00000628857 KIRREL2Q6UWL6 708 aa3.61□□□□□ -1.83
CNOT1-223ENST00000628857 KIAA0408Q6ZU52 694 aa3.61□□□□□ -1.83
CNOT1-223ENST00000628857 C12orf76Q8N812 135 aaPredicted RBP3.61□□□□□ -1.83
CNOT1-223ENST00000628857 DDX51Q8N8A6 666 aaKnown RBP eCLIP3.61□□□□□ -1.83
CNOT1-223ENST00000628857 CCDC150Q8NCX0 1101 aa3.61□□□□□ -1.83
CNOT1-223ENST00000628857 SUN3Q8TAQ9 357 aa3.61□□□□□ -1.83
CNOT1-223ENST00000628857 ABHD5Q8WTS1 349 aa3.61□□□□□ -1.83
CNOT1-223ENST00000628857 ZBTB45Q96K62 511 aaPredicted RBP3.61□□□□□ -1.83
CNOT1-223ENST00000628857 SNX27Q96L92 541 aa3.61□□□□□ -1.83
CNOT1-223ENST00000628857 WDR24Q96S15 920 aa3.61□□□□□ -1.83
CNOT1-223ENST00000628857 MAGEB5Q9BZ81 275 aa3.61□□□□□ -1.83
CNOT1-223ENST00000628857 TM7SF3Q9NS93 570 aa3.61□□□□□ -1.83
CNOT1-223ENST00000628857 SH3BP4Q9P0V3 963 aa3.61□□□□□ -1.83
CNOT1-223ENST00000628857 SEMA5BQ9P283 1151 aa3.61□□□□□ -1.83
CNOT1-223ENST00000628857 RIMKLBQ9ULI2 386 aa3.61□□□□□ -1.83
CNOT1-223ENST00000628857 CA14Q9ULX7 337 aa3.61□□□□□ -1.83
CNOT1-223ENST00000628857 MAFFQ9ULX9 164 aa3.61□□□□□ -1.83
CNOT1-223ENST00000628857 LAS1LQ9Y4W2 734 aaKnown RBP3.61□□□□□ -1.83
CNOT1-223ENST00000628857 ARHGEF17Q96PE2 2063 aaPredicted RBP3.61□□□□□ -1.83
CNOT1-223ENST00000628857 HMGB1P1B2RPK0 211 aaPredicted RBP3.6□□□□□ -1.83
CNOT1-223ENST00000628857 RASA4BC9J798 803 aa3.6□□□□□ -1.83
CNOT1-223ENST00000628857 APOL1O14791 398 aa3.6□□□□□ -1.83
CNOT1-223ENST00000628857 RASA4O43374 803 aa3.6□□□□□ -1.83
CNOT1-223ENST00000628857 TPD52L2O43399 206 aaKnown RBP3.6□□□□□ -1.83
CNOT1-223ENST00000628857 CCNT2O60583 730 aaKnown RBP3.6□□□□□ -1.83
CNOT1-223ENST00000628857 USP1O94782 785 aa3.6□□□□□ -1.83
CNOT1-223ENST00000628857 VNN1O95497 513 aa3.6□□□□□ -1.83
CNOT1-223ENST00000628857 HGFP14210 728 aa3.6□□□□□ -1.83
CNOT1-223ENST00000628857 ADRA1DP25100 572 aa3.6□□□□□ -1.83
CNOT1-223ENST00000628857 DEKP35659 375 aaKnown RBP3.6□□□□□ -1.83
CNOT1-223ENST00000628857 DIO1P49895 249 aa3.6□□□□□ -1.83
CNOT1-223ENST00000628857 ALDH5A1P51649 535 aaPredicted RBP3.6□□□□□ -1.83
CNOT1-223ENST00000628857 EIF4A1P60842 406 aaKnown RBP3.6□□□□□ -1.83
CNOT1-223ENST00000628857 BTKQ06187 659 aa3.6□□□□□ -1.83
CNOT1-223ENST00000628857 LMAN2Q12907 356 aa3.6□□□□□ -1.83
CNOT1-223ENST00000628857 STK3Q13188 491 aa3.6□□□□□ -1.83
CNOT1-223ENST00000628857 DNASE1L3Q13609 305 aa3.6□□□□□ -1.83
CNOT1-223ENST00000628857 KCNJ12Q14500 433 aa3.6□□□□□ -1.83
CNOT1-223ENST00000628857 FAM187BQ17R55 369 aa3.6□□□□□ -1.83
CNOT1-223ENST00000628857 SLC5A9Q2M3M2 681 aa3.6□□□□□ -1.83
CNOT1-223ENST00000628857 ARL13BQ3SXY8 428 aa3.6□□□□□ -1.83
CNOT1-223ENST00000628857 CERKLQ49MI3 558 aaPredicted RBP3.6□□□□□ -1.83
CNOT1-223ENST00000628857 DGKKQ5KSL6 1271 aa3.6□□□□□ -1.83
CNOT1-223ENST00000628857 GORABQ5T7V8 394 aa3.6□□□□□ -1.83
CNOT1-223ENST00000628857 IZUMO3Q5VZ72 239 aa3.6□□□□□ -1.83
CNOT1-223ENST00000628857 NAPRTQ6XQN6 538 aa3.6□□□□□ -1.83
CNOT1-223ENST00000628857 ZNF813Q6ZN06 617 aa3.6□□□□□ -1.83
CNOT1-223ENST00000628857 CHSY1Q86X52 802 aa3.6□□□□□ -1.83
CNOT1-223ENST00000628857 C8orf58Q8NAV2 365 aa3.6□□□□□ -1.83
CNOT1-223ENST00000628857 OVCA2Q8WZ82 227 aa3.6□□□□□ -1.83
CNOT1-223ENST00000628857 WDYHV1Q96HA8 205 aa3.6□□□□□ -1.83
CNOT1-223ENST00000628857 CCDC17Q96LX7 622 aa3.6□□□□□ -1.83
CNOT1-223ENST00000628857 TBCBQ99426 244 aa3.6□□□□□ -1.83
CNOT1-223ENST00000628857 CIPCQ9C0C6 399 aa3.6□□□□□ -1.83
CNOT1-223ENST00000628857 SLC25A32Q9H2D1 315 aa3.6□□□□□ -1.83
CNOT1-223ENST00000628857 NECTIN3Q9NQS3 549 aa3.6□□□□□ -1.83
CNOT1-223ENST00000628857 TBC1D23Q9NUY8 699 aa3.6□□□□□ -1.83
CNOT1-223ENST00000628857 CORO2BQ9UQ03 480 aa3.6□□□□□ -1.83
CNOT1-223ENST00000628857 SLC27A6Q9Y2P4 619 aa3.6□□□□□ -1.83
CNOT1-223ENST00000628857 A0A087WZ62 844 aa3.59□□□□□ -1.83
CNOT1-223ENST00000628857 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP3.59□□□□□ -1.83
CNOT1-223ENST00000628857 MANSC4A6NHS7 340 aaPredicted RBP3.59□□□□□ -1.83
CNOT1-223ENST00000628857 INO80B-WBP1J3KQ70 363 aa3.59□□□□□ -1.83
CNOT1-223ENST00000628857 AGPSO00116 658 aa3.59□□□□□ -1.83
CNOT1-223ENST00000628857 PPP6CO00743 305 aa3.59□□□□□ -1.83
CNOT1-223ENST00000628857 KPNA5O15131 536 aa3.59□□□□□ -1.83
CNOT1-223ENST00000628857 TMEM225BP0DP42 221 aa3.59□□□□□ -1.83
CNOT1-223ENST00000628857 CDK4P11802 303 aa3.59□□□□□ -1.83
CNOT1-223ENST00000628857 APEHP13798 732 aaKnown RBP3.59□□□□□ -1.83
CNOT1-223ENST00000628857 ZNF37AP17032 561 aaPredicted RBP3.59□□□□□ -1.83
CNOT1-223ENST00000628857 GABRB3P28472 473 aa3.59□□□□□ -1.83
CNOT1-223ENST00000628857 ATICP31939 592 aa3.59□□□□□ -1.83
CNOT1-223ENST00000628857 HTR7P34969 479 aa3.59□□□□□ -1.83
CNOT1-223ENST00000628857 RENBPP51606 427 aa3.59□□□□□ -1.83
CNOT1-223ENST00000628857 PSG6Q00889 435 aa3.59□□□□□ -1.83
CNOT1-223ENST00000628857 MTAPQ13126 283 aa3.59□□□□□ -1.83
CNOT1-223ENST00000628857 FHL3Q13643 280 aa3.59□□□□□ -1.83
CNOT1-223ENST00000628857 ATP1A4Q13733 1029 aa3.59□□□□□ -1.83
CNOT1-223ENST00000628857 FAXCQ5TGI0 409 aa3.59□□□□□ -1.83
CNOT1-223ENST00000628857 ARL6IP4Q66PJ3 421 aaKnown RBP3.59□□□□□ -1.83
CNOT1-223ENST00000628857 HIBCHQ6NVY1 386 aaPredicted RBP3.59□□□□□ -1.83
CNOT1-223ENST00000628857 KSR2Q6VAB6 950 aa3.59□□□□□ -1.83
CNOT1-223ENST00000628857 UBE2Q1Q7Z7E8 422 aa3.59□□□□□ -1.83
CNOT1-223ENST00000628857 TMTC2Q8N394 836 aa3.59□□□□□ -1.83
CNOT1-223ENST00000628857 GALNT16Q8N428 558 aa3.59□□□□□ -1.83
CNOT1-223ENST00000628857 OR2C3Q8N628 320 aa3.59□□□□□ -1.83
CNOT1-223ENST00000628857 METTL25Q8N6Q8 603 aa3.59□□□□□ -1.83
CNOT1-223ENST00000628857 SVIPQ8NHG7 77 aa3.59□□□□□ -1.83
CNOT1-223ENST00000628857 SECISBP2LQ93073 1101 aaKnown RBP3.59□□□□□ -1.83
CNOT1-223ENST00000628857 EDC3Q96F86 508 aaKnown RBP3.59□□□□□ -1.83
CNOT1-223ENST00000628857 P2RY11Q96G91 374 aa3.59□□□□□ -1.83
CNOT1-223ENST00000628857 KAZALD1Q96I82 304 aa3.59□□□□□ -1.83
CNOT1-223ENST00000628857 RITA1Q96K30 269 aa3.59□□□□□ -1.83
CNOT1-223ENST00000628857 MYD88Q99836 296 aa3.59□□□□□ -1.83
CNOT1-223ENST00000628857 ASIC5Q9NY37 505 aa3.59□□□□□ -1.83
CNOT1-223ENST00000628857 FZD4Q9ULV1 537 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms