RNA–Protein interactions for RNA: ENST00000628729.2

PDCD6-214, Transcript of programmed cell death 6, humanhuman

TSL 5 BASIC

Gene PDCD6, Length 1,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-214ENST00000628729 MIB1Q86YT6 1006 aa17.5■□□□□ 0.39
PDCD6-214ENST00000628729 FRMD1Q8N878 549 aa17.5■□□□□ 0.39
PDCD6-214ENST00000628729 OLIG1Q8TAK6 271 aa17.5■□□□□ 0.39
PDCD6-214ENST00000628729 SEMA4DQ92854 862 aa17.5■□□□□ 0.39
PDCD6-214ENST00000628729 OTUB2Q96DC9 234 aa17.5■□□□□ 0.39
PDCD6-214ENST00000628729 HNRNPABQ99729 332 aaKnown RBP17.5■□□□□ 0.39
PDCD6-214ENST00000628729 KLF16Q9BXK1 252 aaPredicted RBP17.5■□□□□ 0.39
PDCD6-214ENST00000628729 CYLDQ9NQC7 956 aa17.5■□□□□ 0.39
PDCD6-214ENST00000628729 SPHK2Q9NRA0 654 aa17.5■□□□□ 0.39
PDCD6-214ENST00000628729 GBP1P32455 592 aa17.49■□□□□ 0.39
PDCD6-214ENST00000628729 GRIA2P42262 883 aa17.49■□□□□ 0.39
PDCD6-214ENST00000628729 CREB5Q02930 508 aa17.49■□□□□ 0.39
PDCD6-214ENST00000628729 STPG1Q5TH74 334 aa17.49■□□□□ 0.39
PDCD6-214ENST00000628729 CYFIP2Q96F07 1278 aa17.49■□□□□ 0.39
PDCD6-214ENST00000628729 ARID3AQ99856 593 aa17.49■□□□□ 0.39
PDCD6-214ENST00000628729 NT5C1AQ9BXI3 368 aa17.49■□□□□ 0.39
PDCD6-214ENST00000628729 VPS45Q9NRW7 570 aa17.49■□□□□ 0.39
PDCD6-214ENST00000628729 NUDT5Q9UKK9 219 aa17.49■□□□□ 0.39
PDCD6-214ENST00000628729 SCML2Q9UQR0 700 aa17.49■□□□□ 0.39
PDCD6-214ENST00000628729 SH3BP1Q9Y3L3 701 aa17.49■□□□□ 0.39
PDCD6-214ENST00000628729 MAP1BP46821 2468 aaKnown RBP17.49■□□□□ 0.39
PDCD6-214ENST00000628729 USP24Q9UPU5 2620 aa17.49■□□□□ 0.39
PDCD6-214ENST00000628729 WDFY3Q8IZQ1 3526 aa17.48■□□□□ 0.39
PDCD6-214ENST00000628729 MYO18AQ92614 2054 aaKnown RBP17.48■□□□□ 0.39
PDCD6-214ENST00000628729 A0A1W2PQH9 124 aa17.48■□□□□ 0.39
PDCD6-214ENST00000628729 LNP1A1A4G5 178 aa17.48■□□□□ 0.39
PDCD6-214ENST00000628729 PATE3B3GLJ2 98 aa17.48■□□□□ 0.39
PDCD6-214ENST00000628729 ZNF202O95125 648 aa17.48■□□□□ 0.39
PDCD6-214ENST00000628729 ACO1P21399 889 aaKnown RBP17.48■□□□□ 0.39
PDCD6-214ENST00000628729 GAD2Q05329 585 aa17.48■□□□□ 0.39
PDCD6-214ENST00000628729 PPP1R26Q5T8A7 1209 aaPredicted RBP17.48■□□□□ 0.39
PDCD6-214ENST00000628729 HTR3DQ70Z44 454 aa17.48■□□□□ 0.39
PDCD6-214ENST00000628729 SCD5Q86SK9 330 aa17.48■□□□□ 0.39
PDCD6-214ENST00000628729 TTC30AQ86WT1 665 aa17.48■□□□□ 0.39
PDCD6-214ENST00000628729 TERB1Q8NA31 727 aa17.48■□□□□ 0.39
PDCD6-214ENST00000628729 CCDC26Q8TAB7 109 aa17.48■□□□□ 0.39
PDCD6-214ENST00000628729 RLN3Q8WXF3 142 aa17.48■□□□□ 0.39
PDCD6-214ENST00000628729 FBXO44Q9H4M3 255 aa17.48■□□□□ 0.39
PDCD6-214ENST00000628729 CYP3A43Q9HB55 503 aa17.48■□□□□ 0.39
PDCD6-214ENST00000628729 TMEM8AQ9HCN3 771 aa17.48■□□□□ 0.39
PDCD6-214ENST00000628729 TLR8Q9NR97 1041 aaKnown RBP17.48■□□□□ 0.39
PDCD6-214ENST00000628729 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.48■□□□□ 0.39
PDCD6-214ENST00000628729 CEP295Q9C0D2 2601 aa17.47■□□□□ 0.39
PDCD6-214ENST00000628729 RHOBTB1O94844 696 aa17.47■□□□□ 0.39
PDCD6-214ENST00000628729 CAVIN2O95810 425 aa17.47■□□□□ 0.39
PDCD6-214ENST00000628729 PSMC2P35998 433 aaKnown RBP17.47■□□□□ 0.39
PDCD6-214ENST00000628729 P2RY2P41231 377 aa17.47■□□□□ 0.39
PDCD6-214ENST00000628729 TNFRSF4P43489 277 aa17.47■□□□□ 0.39
PDCD6-214ENST00000628729 KIF11P52732 1056 aa17.47■□□□□ 0.39
PDCD6-214ENST00000628729 ENPEPQ07075 957 aa17.47■□□□□ 0.39
PDCD6-214ENST00000628729 ADAM9Q13443 819 aa17.47■□□□□ 0.39
PDCD6-214ENST00000628729 PNOCQ13519 176 aa17.47■□□□□ 0.39
PDCD6-214ENST00000628729 ZNF394Q53GI3 561 aa17.47■□□□□ 0.39
PDCD6-214ENST00000628729 USP39Q53GS9 565 aaKnown RBP17.47■□□□□ 0.39
PDCD6-214ENST00000628729 EDEM2Q9BV94 578 aa17.47■□□□□ 0.39
PDCD6-214ENST00000628729 IMPG2Q9BZV3 1241 aa17.47■□□□□ 0.39
PDCD6-214ENST00000628729 SCAND2PQ9GZW5 306 aaPredicted RBP17.47■□□□□ 0.39
PDCD6-214ENST00000628729 NACA2Q9H009 215 aa17.47■□□□□ 0.39
PDCD6-214ENST00000628729 CD248Q9HCU0 757 aa17.47■□□□□ 0.39
PDCD6-214ENST00000628729 PNPLA8Q9NP80 782 aa17.47■□□□□ 0.39
PDCD6-214ENST00000628729 MBD1Q9UIS9 605 aaPredicted RBP17.47■□□□□ 0.39
PDCD6-214ENST00000628729 TCRBV21S2A2A0A5A6 115 aa17.46■□□□□ 0.39
PDCD6-214ENST00000628729 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.46■□□□□ 0.39
PDCD6-214ENST00000628729 CACNG3O60359 315 aa17.46■□□□□ 0.39
PDCD6-214ENST00000628729 KIF20AO95235 890 aa17.46■□□□□ 0.39
PDCD6-214ENST00000628729 KRT13P13646 458 aa17.46■□□□□ 0.39
PDCD6-214ENST00000628729 ANO4Q32M45 955 aa17.46■□□□□ 0.39
PDCD6-214ENST00000628729 EDRF1Q3B7T1 1238 aa17.46■□□□□ 0.39
PDCD6-214ENST00000628729 MAP7D1Q3KQU3 841 aa17.46■□□□□ 0.39
PDCD6-214ENST00000628729 HSF5Q4G112 596 aaPredicted RBP17.46■□□□□ 0.39
PDCD6-214ENST00000628729 EGFLAMQ63HQ2 1017 aa17.46■□□□□ 0.39
PDCD6-214ENST00000628729 IL31Q6EBC2 164 aa17.46■□□□□ 0.39
PDCD6-214ENST00000628729 Q6ZNB5 142 aa17.46■□□□□ 0.39
PDCD6-214ENST00000628729 TOGARAM2Q6ZUX3 1019 aa17.46■□□□□ 0.39
PDCD6-214ENST00000628729 CCDC186Q7Z3E2 898 aa17.46■□□□□ 0.39
PDCD6-214ENST00000628729 FMR1NBQ8N0W7 255 aaPredicted RBP17.46■□□□□ 0.39
PDCD6-214ENST00000628729 HMGB4Q8WW32 186 aa17.46■□□□□ 0.39
PDCD6-214ENST00000628729 CCDC47Q96A33 483 aaKnown RBP17.46■□□□□ 0.39
PDCD6-214ENST00000628729 ACOX2Q99424 681 aa17.46■□□□□ 0.39
PDCD6-214ENST00000628729 PCDHA5Q9Y5H7 936 aa17.46■□□□□ 0.39
PDCD6-214ENST00000628729 NEDD8-MDP1E9PL57 170 aa17.45■□□□□ 0.38
PDCD6-214ENST00000628729 RARGP13631 454 aa17.45■□□□□ 0.38
PDCD6-214ENST00000628729 ATP5C1P36542 298 aaKnown RBP17.45■□□□□ 0.38
PDCD6-214ENST00000628729 MXI1P50539 228 aa17.45■□□□□ 0.38
PDCD6-214ENST00000628729 PMS1P54277 932 aaKnown RBP17.45■□□□□ 0.38
PDCD6-214ENST00000628729 RAD23BP54727 409 aa17.45■□□□□ 0.38
PDCD6-214ENST00000628729 CBWD6Q4V339 395 aa17.45■□□□□ 0.38
PDCD6-214ENST00000628729 CBWD3Q5JTY5 395 aa17.45■□□□□ 0.38
PDCD6-214ENST00000628729 EOGTQ5NDL2 527 aa17.45■□□□□ 0.38
PDCD6-214ENST00000628729 CBWD5Q5RIA9 395 aa17.45■□□□□ 0.38
PDCD6-214ENST00000628729 C10orf76Q5T2E6 689 aa17.45■□□□□ 0.38
PDCD6-214ENST00000628729 KRT39Q6A163 491 aa17.45■□□□□ 0.38
PDCD6-214ENST00000628729 ZNF513Q8N8E2 541 aaPredicted RBP17.45■□□□□ 0.38
PDCD6-214ENST00000628729 SLC4A11Q8NBS3 891 aa17.45■□□□□ 0.38
PDCD6-214ENST00000628729 ERCC4Q92889 916 aaPredicted RBP17.45■□□□□ 0.38
PDCD6-214ENST00000628729 DUSP16Q9BY84 665 aa17.45■□□□□ 0.38
PDCD6-214ENST00000628729 CISHQ9NSE2 258 aa17.45■□□□□ 0.38
PDCD6-214ENST00000628729 DNAJC17Q9NVM6 304 aaKnown RBP17.45■□□□□ 0.38
PDCD6-214ENST00000628729 MARK1Q9P0L2 795 aa17.45■□□□□ 0.38
PDCD6-214ENST00000628729 DEC1Q9P2X7 70 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms