RNA–Protein interactions for RNA: ENST00000627587.2

PDLIM5-223, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-223ENST00000627587 ATAT1Q5SQI0 421 aa9.96□□□□□ -0.81
PDLIM5-223ENST00000627587 FAM171BQ6P995 826 aa9.96□□□□□ -0.81
PDLIM5-223ENST00000627587 FBXO38Q6PIJ6 1188 aa9.96□□□□□ -0.81
PDLIM5-223ENST00000627587 CLEC20AQ6ZU45 233 aa9.96□□□□□ -0.81
PDLIM5-223ENST00000627587 LRRTM3Q86VH5 581 aa9.96□□□□□ -0.81
PDLIM5-223ENST00000627587 SCUBE3Q8IX30 993 aa9.96□□□□□ -0.81
PDLIM5-223ENST00000627587 GPR161Q8N6U8 529 aaKnown RBP9.96□□□□□ -0.81
PDLIM5-223ENST00000627587 ZMIZ2Q8NF64 920 aa9.96□□□□□ -0.81
PDLIM5-223ENST00000627587 FNIP1Q8TF40 1166 aa9.96□□□□□ -0.81
PDLIM5-223ENST00000627587 HDAC7Q8WUI4 952 aa9.96□□□□□ -0.81
PDLIM5-223ENST00000627587 PARD6BQ9BYG5 372 aa9.96□□□□□ -0.81
PDLIM5-223ENST00000627587 RHOBTB2Q9BYZ6 727 aa9.96□□□□□ -0.81
PDLIM5-223ENST00000627587 ADAM33Q9BZ11 813 aa9.96□□□□□ -0.81
PDLIM5-223ENST00000627587 RAB6CQ9H0N0 254 aa9.96□□□□□ -0.81
PDLIM5-223ENST00000627587 TMLHEQ9NVH6 421 aa9.96□□□□□ -0.81
PDLIM5-223ENST00000627587 MARCH5Q9NX47 278 aa9.96□□□□□ -0.81
PDLIM5-223ENST00000627587 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.96□□□□□ -0.81
PDLIM5-223ENST00000627587 C2orf71A6NGG8 1288 aa9.96□□□□□ -0.82
PDLIM5-223ENST00000627587 C2CD4BA6NLJ0 364 aa9.96□□□□□ -0.82
PDLIM5-223ENST00000627587 PROB1E7EW31 1015 aa9.96□□□□□ -0.82
PDLIM5-223ENST00000627587 PGRMC1O00264 195 aaKnown RBP9.96□□□□□ -0.82
PDLIM5-223ENST00000627587 MAP3K13O43283 966 aa9.96□□□□□ -0.82
PDLIM5-223ENST00000627587 LRCH4O75427 683 aa9.96□□□□□ -0.82
PDLIM5-223ENST00000627587 CXCL14O95715 111 aa9.96□□□□□ -0.82
PDLIM5-223ENST00000627587 FGGP02679 453 aa9.96□□□□□ -0.82
PDLIM5-223ENST00000627587 RHOXF2BP0C7M4 288 aa9.96□□□□□ -0.82
PDLIM5-223ENST00000627587 OR1G1P47890 313 aa9.96□□□□□ -0.82
PDLIM5-223ENST00000627587 MRPS25P82663 173 aaKnown RBP9.96□□□□□ -0.82
PDLIM5-223ENST00000627587 PIGHQ14442 188 aaPredicted RBP9.96□□□□□ -0.82
PDLIM5-223ENST00000627587 SIX1Q15475 284 aaPredicted RBP9.96□□□□□ -0.82
PDLIM5-223ENST00000627587 KCTD19Q17RG1 926 aaPredicted RBP9.96□□□□□ -0.82
PDLIM5-223ENST00000627587 FAM102AQ5T9C2 384 aaPredicted RBP9.96□□□□□ -0.82
PDLIM5-223ENST00000627587 SH3PXD2AQ5TCZ1 1133 aa9.96□□□□□ -0.82
PDLIM5-223ENST00000627587 CYP4V2Q6ZWL3 525 aaPredicted RBP9.96□□□□□ -0.82
PDLIM5-223ENST00000627587 PIGZQ86VD9 579 aa9.96□□□□□ -0.82
PDLIM5-223ENST00000627587 TMEM173Q86WV6 379 aaPredicted RBP9.96□□□□□ -0.82
PDLIM5-223ENST00000627587 KREMEN2Q8NCW0 462 aa9.96□□□□□ -0.82
PDLIM5-223ENST00000627587 MYCBPAPQ8TBZ2 947 aa9.96□□□□□ -0.82
PDLIM5-223ENST00000627587 TMEM169Q96HH4 297 aa9.96□□□□□ -0.82
PDLIM5-223ENST00000627587 PKNOX2Q96KN3 472 aa9.96□□□□□ -0.82
PDLIM5-223ENST00000627587 NAP1L3Q99457 506 aaPredicted RBP9.96□□□□□ -0.82
PDLIM5-223ENST00000627587 RHOXF2Q9BQY4 288 aa9.96□□□□□ -0.82
PDLIM5-223ENST00000627587 LRRC1Q9BTT6 524 aa9.96□□□□□ -0.82
PDLIM5-223ENST00000627587 AP1M1Q9BXS5 423 aa9.96□□□□□ -0.82
PDLIM5-223ENST00000627587 DUSP16Q9BY84 665 aa9.96□□□□□ -0.82
PDLIM5-223ENST00000627587 SCUBE2Q9NQ36 999 aa9.96□□□□□ -0.82
PDLIM5-223ENST00000627587 CDH9Q9ULB4 789 aa9.96□□□□□ -0.82
PDLIM5-223ENST00000627587 USTQ9Y2C2 406 aa9.96□□□□□ -0.82
PDLIM5-223ENST00000627587 HCFC2Q9Y5Z7 792 aa9.96□□□□□ -0.82
PDLIM5-223ENST00000627587 IRAK3Q9Y616 596 aa9.96□□□□□ -0.82
PDLIM5-223ENST00000627587 KMT2EQ8IZD2 1858 aa9.95□□□□□ -0.82
PDLIM5-223ENST00000627587 MYO16Q9Y6X6 1858 aa9.95□□□□□ -0.82
PDLIM5-223ENST00000627587 HHLA1C9JL84 531 aa9.95□□□□□ -0.82
PDLIM5-223ENST00000627587 NRP1O14786 923 aa9.95□□□□□ -0.82
PDLIM5-223ENST00000627587 XPO1O14980 1071 aaKnown RBP9.95□□□□□ -0.82
PDLIM5-223ENST00000627587 GFRA3O60609 400 aa9.95□□□□□ -0.82
PDLIM5-223ENST00000627587 CLASP2O75122 1294 aaKnown RBP9.95□□□□□ -0.82
PDLIM5-223ENST00000627587 GRAP2O75791 330 aa9.95□□□□□ -0.82
PDLIM5-223ENST00000627587 NPR3P17342 541 aa9.95□□□□□ -0.82
PDLIM5-223ENST00000627587 TYMPP19971 482 aa9.95□□□□□ -0.82
PDLIM5-223ENST00000627587 IL1R2P27930 398 aa9.95□□□□□ -0.82
PDLIM5-223ENST00000627587 TIE1P35590 1138 aa9.95□□□□□ -0.82
PDLIM5-223ENST00000627587 VCPP55072 806 aaKnown RBP9.95□□□□□ -0.82
PDLIM5-223ENST00000627587 RWDD2BP57060 319 aa9.95□□□□□ -0.82
PDLIM5-223ENST00000627587 RBM10P98175 930 aaKnown RBP9.95□□□□□ -0.82
PDLIM5-223ENST00000627587 FOXK2Q01167 660 aa9.95□□□□□ -0.82
PDLIM5-223ENST00000627587 SLC25A11Q02978 314 aaKnown RBP9.95□□□□□ -0.82
PDLIM5-223ENST00000627587 ADCY1Q08828 1119 aa9.95□□□□□ -0.82
PDLIM5-223ENST00000627587 SEL1L2Q5TEA6 688 aa9.95□□□□□ -0.82
PDLIM5-223ENST00000627587 OR6B2Q6IFH4 312 aa9.95□□□□□ -0.82
PDLIM5-223ENST00000627587 CCDC70Q6NSX1 233 aa9.95□□□□□ -0.82
PDLIM5-223ENST00000627587 CC2D1AQ6P1N0 951 aaPredicted RBP9.95□□□□□ -0.82
PDLIM5-223ENST00000627587 GPRIN1Q7Z2K8 1008 aa9.95□□□□□ -0.82
PDLIM5-223ENST00000627587 FAM35AQ86V20 835 aa9.95□□□□□ -0.82
PDLIM5-223ENST00000627587 ZDHHC17Q8IUH5 632 aa9.95□□□□□ -0.82
PDLIM5-223ENST00000627587 BCL7CQ8WUZ0 217 aaPredicted RBP9.95□□□□□ -0.82
PDLIM5-223ENST00000627587 KCNK16Q96T55 309 aa9.95□□□□□ -0.82
PDLIM5-223ENST00000627587 PHOX2BQ99453 314 aa9.95□□□□□ -0.82
PDLIM5-223ENST00000627587 SMOQ99835 787 aa9.95□□□□□ -0.82
PDLIM5-223ENST00000627587 ACBD6Q9BR61 282 aa9.95□□□□□ -0.82
PDLIM5-223ENST00000627587 MED10Q9BTT4 135 aa9.95□□□□□ -0.82
PDLIM5-223ENST00000627587 CYLDQ9NQC7 956 aa9.95□□□□□ -0.82
PDLIM5-223ENST00000627587 KRT82Q9NSB4 513 aa9.95□□□□□ -0.82
PDLIM5-223ENST00000627587 DMGDHQ9UI17 866 aaKnown RBP9.95□□□□□ -0.82
PDLIM5-223ENST00000627587 RAB21Q9UL25 225 aa9.95□□□□□ -0.82
PDLIM5-223ENST00000627587 PCDHB8Q9UN66 801 aa9.95□□□□□ -0.82
PDLIM5-223ENST00000627587 PRG3Q9Y2Y8 225 aaPredicted RBP9.95□□□□□ -0.82
PDLIM5-223ENST00000627587 PSTPIP1O43586 416 aa9.94□□□□□ -0.82
PDLIM5-223ENST00000627587 TRAPPC3O43617 180 aa9.94□□□□□ -0.82
PDLIM5-223ENST00000627587 EFEMP2O95967 443 aa9.94□□□□□ -0.82
PDLIM5-223ENST00000627587 TFE3P19532 575 aaPredicted RBP9.94□□□□□ -0.82
PDLIM5-223ENST00000627587 PBX3P40426 434 aa9.94□□□□□ -0.82
PDLIM5-223ENST00000627587 SSR1P43307 286 aaKnown RBP9.94□□□□□ -0.82
PDLIM5-223ENST00000627587 ACADSBP45954 432 aa9.94□□□□□ -0.82
PDLIM5-223ENST00000627587 SLC11A1P49279 550 aa9.94□□□□□ -0.82
PDLIM5-223ENST00000627587 PLXNA3P51805 1871 aa9.94□□□□□ -0.82
PDLIM5-223ENST00000627587 BCAR1P56945 870 aa9.94□□□□□ -0.82
PDLIM5-223ENST00000627587 VSNL1P62760 191 aa9.94□□□□□ -0.82
PDLIM5-223ENST00000627587 SLC6A3Q01959 620 aa9.94□□□□□ -0.82
PDLIM5-223ENST00000627587 INTS6LQ5JSJ4 861 aaKnown RBP9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms