RNA–Protein interactions for RNA: ENST00000627232.2

PNKP-220, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 1,530 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-220ENST00000627232 CCDC77Q9BR77 488 aa22.98■■□□□ 1.27
PNKP-220ENST00000627232 KRT82Q9NSB4 513 aa22.98■■□□□ 1.27
PNKP-220ENST00000627232 BEST1O76090 585 aa22.98■■□□□ 1.27
PNKP-220ENST00000627232 CYP11A1P05108 521 aa22.98■■□□□ 1.27
PNKP-220ENST00000627232 ATP5DP30049 168 aa22.98■■□□□ 1.27
PNKP-220ENST00000627232 NOS2P35228 1153 aa22.98■■□□□ 1.27
PNKP-220ENST00000627232 CTCFP49711 727 aaPredicted RBP22.98■■□□□ 1.27
PNKP-220ENST00000627232 YWHAZP63104 245 aaKnown RBP22.98■■□□□ 1.27
PNKP-220ENST00000627232 TUSC3Q13454 348 aa22.98■■□□□ 1.27
PNKP-220ENST00000627232 SKIDA1Q1XH10 827 aa22.98■■□□□ 1.27
PNKP-220ENST00000627232 TIGD5Q53EQ6 642 aa22.98■■□□□ 1.27
PNKP-220ENST00000627232 TTC19Q6DKK2 380 aaPredicted RBP22.98■■□□□ 1.27
PNKP-220ENST00000627232 NPNTQ6UXI9 565 aa22.98■■□□□ 1.27
PNKP-220ENST00000627232 CENPUQ71F23 418 aa22.98■■□□□ 1.27
PNKP-220ENST00000627232 FAM35AQ86V20 835 aa22.98■■□□□ 1.27
PNKP-220ENST00000627232 METTL23Q86XA0 190 aa22.98■■□□□ 1.27
PNKP-220ENST00000627232 ECHDC2Q86YB7 292 aa22.98■■□□□ 1.27
PNKP-220ENST00000627232 DEFB106AQ8N104 65 aa22.98■■□□□ 1.27
PNKP-220ENST00000627232 SIX6OS1Q8N1H7 587 aa22.98■■□□□ 1.27
PNKP-220ENST00000627232 PCDH19Q8TAB3 1148 aa22.98■■□□□ 1.27
PNKP-220ENST00000627232 MYCBPAPQ8TBZ2 947 aa22.98■■□□□ 1.27
PNKP-220ENST00000627232 CPT1BQ92523 772 aa22.98■■□□□ 1.27
PNKP-220ENST00000627232 NT5C3BQ969T7 300 aa22.98■■□□□ 1.27
PNKP-220ENST00000627232 SAYSD1Q9NPB0 183 aa22.98■■□□□ 1.27
PNKP-220ENST00000627232 DSEQ9UL01 958 aa22.98■■□□□ 1.27
PNKP-220ENST00000627232 AP4E1Q9UPM8 1137 aa22.98■■□□□ 1.27
PNKP-220ENST00000627232 SMIM23A6NLE4 172 aa22.97■■□□□ 1.27
PNKP-220ENST00000627232 ALOX15BO15296 676 aa22.97■■□□□ 1.27
PNKP-220ENST00000627232 TOMM70O94826 608 aa22.97■■□□□ 1.27
PNKP-220ENST00000627232 MMP13P45452 471 aa22.97■■□□□ 1.27
PNKP-220ENST00000627232 SULT1E1P49888 294 aa22.97■■□□□ 1.27
PNKP-220ENST00000627232 BCAR1P56945 870 aa22.97■■□□□ 1.27
PNKP-220ENST00000627232 BNIPLQ7Z465 357 aa22.97■■□□□ 1.27
PNKP-220ENST00000627232 ZNF598Q86UK7 904 aaKnown RBP22.97■■□□□ 1.27
PNKP-220ENST00000627232 NAT8LQ8N9F0 302 aa22.97■■□□□ 1.27
PNKP-220ENST00000627232 FAM71DQ8N9W8 422 aa22.97■■□□□ 1.27
PNKP-220ENST00000627232 RAET1EQ8TD07 263 aa22.97■■□□□ 1.27
PNKP-220ENST00000627232 RTP4Q96DX8 246 aa22.97■■□□□ 1.27
PNKP-220ENST00000627232 GLT1D1Q96MS3 346 aa22.97■■□□□ 1.27
PNKP-220ENST00000627232 SLC2A13Q96QE2 648 aa22.97■■□□□ 1.27
PNKP-220ENST00000627232 ADAM33Q9BZ11 813 aa22.97■■□□□ 1.27
PNKP-220ENST00000627232 EPN3Q9H201 632 aa22.97■■□□□ 1.27
PNKP-220ENST00000627232 NRDE2Q9H7Z3 1164 aa22.97■■□□□ 1.27
PNKP-220ENST00000627232 CALCOCO1Q9P1Z2 691 aa22.97■■□□□ 1.27
PNKP-220ENST00000627232 STAP1Q9ULZ2 295 aa22.97■■□□□ 1.27
PNKP-220ENST00000627232 A0A087WUV0 522 aaPredicted RBP22.96■■□□□ 1.27
PNKP-220ENST00000627232 ARHGEF37A1IGU5 675 aa22.96■■□□□ 1.27
PNKP-220ENST00000627232 BCLAF3A2AJT9 711 aaKnown RBP22.96■■□□□ 1.27
PNKP-220ENST00000627232 H7C0C1 242 aa22.96■■□□□ 1.27
PNKP-220ENST00000627232 CYP2F1P24903 491 aa22.96■■□□□ 1.27
PNKP-220ENST00000627232 ATP5OP48047 213 aa22.96■■□□□ 1.27
PNKP-220ENST00000627232 TKTL1P51854 596 aa22.96■■□□□ 1.27
PNKP-220ENST00000627232 HNRNPH2P55795 449 aaKnown RBP22.96■■□□□ 1.27
PNKP-220ENST00000627232 LONRF1Q17RB8 773 aa22.96■■□□□ 1.27
PNKP-220ENST00000627232 C1orf228Q6PIY5 440 aa22.96■■□□□ 1.27
PNKP-220ENST00000627232 TAOK1Q7L7X3 1001 aa22.96■■□□□ 1.27
PNKP-220ENST00000627232 RNF169Q8NCN4 708 aa22.96■■□□□ 1.27
PNKP-220ENST00000627232 FAM149B1Q96BN6 582 aa22.96■■□□□ 1.27
PNKP-220ENST00000627232 CENPTQ96BT3 561 aa22.96■■□□□ 1.27
PNKP-220ENST00000627232 C9orf72Q96LT7 481 aa22.96■■□□□ 1.27
PNKP-220ENST00000627232 NPY6RQ99463 290 aa22.96■■□□□ 1.27
PNKP-220ENST00000627232 C10orf88Q9H8K7 445 aa22.96■■□□□ 1.27
PNKP-220ENST00000627232 RCOR3Q9P2K3 495 aaPredicted RBP22.96■■□□□ 1.27
PNKP-220ENST00000627232 MYBPHLA2RUH7 354 aa22.95■■□□□ 1.26
PNKP-220ENST00000627232 M0QZQ0 153 aa22.95■■□□□ 1.26
PNKP-220ENST00000627232 AP1G2O75843 785 aa22.95■■□□□ 1.26
PNKP-220ENST00000627232 POMCP01189 267 aa22.95■■□□□ 1.26
PNKP-220ENST00000627232 SLCO1A2P46721 670 aa22.95■■□□□ 1.26
PNKP-220ENST00000627232 ARL4CP56559 192 aa22.95■■□□□ 1.26
PNKP-220ENST00000627232 MAP3K7CLP57077 242 aa22.95■■□□□ 1.26
PNKP-220ENST00000627232 IFI35P80217 286 aaPredicted RBP22.95■■□□□ 1.26
PNKP-220ENST00000627232 XRCC4Q13426 336 aa22.95■■□□□ 1.26
PNKP-220ENST00000627232 RAB41Q5JT25 222 aa22.95■■□□□ 1.26
PNKP-220ENST00000627232 RIBC1Q8N443 379 aaPredicted RBP22.95■■□□□ 1.26
PNKP-220ENST00000627232 SMARCD1Q96GM5 515 aa22.95■■□□□ 1.26
PNKP-220ENST00000627232 PCED1BQ96HM7 432 aa22.95■■□□□ 1.26
PNKP-220ENST00000627232 SMOQ99835 787 aa22.95■■□□□ 1.26
PNKP-220ENST00000627232 ACBD6Q9BR61 282 aa22.95■■□□□ 1.26
PNKP-220ENST00000627232 PAAF1Q9BRP4 392 aa22.95■■□□□ 1.26
PNKP-220ENST00000627232 DHX35Q9H5Z1 703 aaKnown RBP22.95■■□□□ 1.26
PNKP-220ENST00000627232 CNGB3Q9NQW8 809 aa22.95■■□□□ 1.26
PNKP-220ENST00000627232 MTMR10Q9NXD2 777 aa22.95■■□□□ 1.26
PNKP-220ENST00000627232 LGALS13Q9UHV8 139 aa22.95■■□□□ 1.26
PNKP-220ENST00000627232 FZD10Q9ULW2 581 aa22.95■■□□□ 1.26
PNKP-220ENST00000627232 TIMM13Q9Y5L4 95 aaPredicted RBP22.95■■□□□ 1.26
PNKP-220ENST00000627232 CKBP12277 381 aa22.94■■□□□ 1.26
PNKP-220ENST00000627232 NR2C2P49116 596 aa22.94■■□□□ 1.26
PNKP-220ENST00000627232 PPP6R3Q5H9R7 873 aaPredicted RBP22.94■■□□□ 1.26
PNKP-220ENST00000627232 ZC3H18Q86VM9 953 aaKnown RBP22.94■■□□□ 1.26
PNKP-220ENST00000627232 SLC43A3Q8NBI5 491 aa22.94■■□□□ 1.26
PNKP-220ENST00000627232 BCAS4Q8TDM0 211 aa22.94■■□□□ 1.26
PNKP-220ENST00000627232 KCTD15Q96SI1 283 aaPredicted RBP22.94■■□□□ 1.26
PNKP-220ENST00000627232 USP29Q9HBJ7 922 aa22.94■■□□□ 1.26
PNKP-220ENST00000627232 POPDC2Q9HBU9 364 aa22.94■■□□□ 1.26
PNKP-220ENST00000627232 RGS18Q9NS28 235 aa22.94■■□□□ 1.26
PNKP-220ENST00000627232 C9IYK1 514 aa22.93■■□□□ 1.26
PNKP-220ENST00000627232 E7ESA3 106 aa22.93■■□□□ 1.26
PNKP-220ENST00000627232 EOMESO95936 686 aa22.93■■□□□ 1.26
PNKP-220ENST00000627232 ATXN1P54253 815 aaKnown RBP22.93■■□□□ 1.26
PNKP-220ENST00000627232 DAOAP59103 153 aa22.93■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms