RNA–Protein interactions for RNA: ENST00000625423.2

VARS2-213, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,362 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-213ENST00000625423 OSBPP22059 807 aa11.7□□□□□ -0.54
VARS2-213ENST00000625423 BMPR2Q13873 1038 aa11.7□□□□□ -0.54
VARS2-213ENST00000625423 RINLQ6ZS11 566 aa11.7□□□□□ -0.54
VARS2-213ENST00000625423 PCDH19Q8TAB3 1148 aa11.7□□□□□ -0.54
VARS2-213ENST00000625423 TUBB6Q9BUF5 446 aa11.7□□□□□ -0.54
VARS2-213ENST00000625423 SLC13A1Q9BZW2 595 aa11.7□□□□□ -0.54
VARS2-213ENST00000625423 PDZD7Q9H5P4 517 aa11.7□□□□□ -0.54
VARS2-213ENST00000625423 VRTNQ9H8Y1 702 aa11.7□□□□□ -0.54
VARS2-213ENST00000625423 ARMCX1Q9P291 453 aa11.7□□□□□ -0.54
VARS2-213ENST00000625423 PCNTO95613 3336 aa11.7□□□□□ -0.54
VARS2-213ENST00000625423 KRT37O76014 449 aa11.7□□□□□ -0.54
VARS2-213ENST00000625423 C22orf31O95567 290 aa11.7□□□□□ -0.54
VARS2-213ENST00000625423 TMEM132DQ14C87 1099 aa11.7□□□□□ -0.54
VARS2-213ENST00000625423 AMHR2Q16671 573 aa11.7□□□□□ -0.54
VARS2-213ENST00000625423 LCLAT1Q6UWP7 414 aa11.7□□□□□ -0.54
VARS2-213ENST00000625423 APBB1IPQ7Z5R6 666 aaPredicted RBP11.7□□□□□ -0.54
VARS2-213ENST00000625423 ALYREFQ86V81 257 aaKnown RBP11.7□□□□□ -0.54
VARS2-213ENST00000625423 FAM172AQ8WUF8 416 aa11.7□□□□□ -0.54
VARS2-213ENST00000625423 OXNAD1Q96HP4 312 aaPredicted RBP11.7□□□□□ -0.54
VARS2-213ENST00000625423 LBHD1Q9BQE6 289 aaPredicted RBP11.7□□□□□ -0.54
VARS2-213ENST00000625423 KLC2Q9H0B6 622 aa11.7□□□□□ -0.54
VARS2-213ENST00000625423 DCLRE1BQ9H816 532 aa11.7□□□□□ -0.54
VARS2-213ENST00000625423 GBA2Q9HCG7 927 aaPredicted RBP11.7□□□□□ -0.54
VARS2-213ENST00000625423 PCDH18Q9HCL0 1135 aa11.7□□□□□ -0.54
VARS2-213ENST00000625423 ANK1P16157 1881 aa11.69□□□□□ -0.54
VARS2-213ENST00000625423 CNMDO75829 334 aa11.69□□□□□ -0.54
VARS2-213ENST00000625423 TXNP10599 105 aaKnown RBP11.69□□□□□ -0.54
VARS2-213ENST00000625423 MCF2P10911 925 aa11.69□□□□□ -0.54
VARS2-213ENST00000625423 PHKA2P46019 1235 aa11.69□□□□□ -0.54
VARS2-213ENST00000625423 SESN3P58005 492 aa11.69□□□□□ -0.54
VARS2-213ENST00000625423 TNFAIP2Q03169 654 aa11.69□□□□□ -0.54
VARS2-213ENST00000625423 PDK2Q15119 407 aa11.69□□□□□ -0.54
VARS2-213ENST00000625423 GOLGA7BQ2TAP0 167 aa11.69□□□□□ -0.54
VARS2-213ENST00000625423 PPP6R3Q5H9R7 873 aaPredicted RBP11.69□□□□□ -0.54
VARS2-213ENST00000625423 PMF1Q6P1K2 205 aa11.69□□□□□ -0.54
VARS2-213ENST00000625423 CCDC33Q8N5R6 958 aa11.69□□□□□ -0.54
VARS2-213ENST00000625423 ARMC2Q8NEN0 867 aa11.69□□□□□ -0.54
VARS2-213ENST00000625423 MICAL1Q8TDZ2 1067 aa11.69□□□□□ -0.54
VARS2-213ENST00000625423 RTP4Q96DX8 246 aa11.69□□□□□ -0.54
VARS2-213ENST00000625423 SNRNP25Q9BV90 132 aaKnown RBP11.69□□□□□ -0.54
VARS2-213ENST00000625423 NMUR2Q9GZQ4 415 aa11.69□□□□□ -0.54
VARS2-213ENST00000625423 ASB7Q9H672 318 aa11.69□□□□□ -0.54
VARS2-213ENST00000625423 PDGFCQ9NRA1 345 aa11.69□□□□□ -0.54
VARS2-213ENST00000625423 RPL26L1Q9UNX3 145 aaKnown RBP11.69□□□□□ -0.54
VARS2-213ENST00000625423 FCHO1O14526 889 aa11.69□□□□□ -0.54
VARS2-213ENST00000625423 ESRRAP11474 423 aaPredicted RBP11.69□□□□□ -0.54
VARS2-213ENST00000625423 TGM2P21980 687 aa11.69□□□□□ -0.54
VARS2-213ENST00000625423 MRPS5P82675 430 aaKnown RBP11.69□□□□□ -0.54
VARS2-213ENST00000625423 INCA1Q0VD86 236 aa11.69□□□□□ -0.54
VARS2-213ENST00000625423 BOLA3Q53S33 107 aa11.69□□□□□ -0.54
VARS2-213ENST00000625423 SCUBE3Q8IX30 993 aa11.69□□□□□ -0.54
VARS2-213ENST00000625423 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.69□□□□□ -0.54
VARS2-213ENST00000625423 VPS52Q8N1B4 723 aa11.69□□□□□ -0.54
VARS2-213ENST00000625423 SH3TC2Q8TF17 1288 aa11.69□□□□□ -0.54
VARS2-213ENST00000625423 ANKRD27Q96NW4 1050 aa11.69□□□□□ -0.54
VARS2-213ENST00000625423 NT5C1AQ9BXI3 368 aa11.69□□□□□ -0.54
VARS2-213ENST00000625423 ZNF395Q9H8N7 513 aaPredicted RBP11.69□□□□□ -0.54
VARS2-213ENST00000625423 TAS2R1Q9NYW7 299 aa11.69□□□□□ -0.54
VARS2-213ENST00000625423 PLLPQ9Y342 182 aa11.69□□□□□ -0.54
VARS2-213ENST00000625423 CCDC195A0A1B0GUA6 201 aa11.68□□□□□ -0.54
VARS2-213ENST00000625423 SLC15A5A6NIM6 579 aa11.68□□□□□ -0.54
VARS2-213ENST00000625423 CYB561D2O14569 222 aa11.68□□□□□ -0.54
VARS2-213ENST00000625423 RFPL1O75677 317 aa11.68□□□□□ -0.54
VARS2-213ENST00000625423 CSH1P0DML2 217 aa11.68□□□□□ -0.54
VARS2-213ENST00000625423 CSH2P0DML3 217 aa11.68□□□□□ -0.54
VARS2-213ENST00000625423 ARF4P18085 180 aaPredicted RBP11.68□□□□□ -0.54
VARS2-213ENST00000625423 PRKCHP24723 683 aa11.68□□□□□ -0.54
VARS2-213ENST00000625423 TMPRSS15P98073 1019 aa11.68□□□□□ -0.54
VARS2-213ENST00000625423 BLMHQ13867 455 aa11.68□□□□□ -0.54
VARS2-213ENST00000625423 KPNB1Q14974 876 aaKnown RBP11.68□□□□□ -0.54
VARS2-213ENST00000625423 PPP1R26Q5T8A7 1209 aaPredicted RBP11.68□□□□□ -0.54
VARS2-213ENST00000625423 CCDC62Q6P9F0 684 aa11.68□□□□□ -0.54
VARS2-213ENST00000625423 UNC5AQ6ZN44 842 aa11.68□□□□□ -0.54
VARS2-213ENST00000625423 MCUR1Q96AQ8 359 aa11.68□□□□□ -0.54
VARS2-213ENST00000625423 MPHOSPH6Q99547 160 aaKnown RBP11.68□□□□□ -0.54
VARS2-213ENST00000625423 TXNRD2Q9NNW7 524 aa11.68□□□□□ -0.54
VARS2-213ENST00000625423 DPP3Q9NY33 737 aa11.68□□□□□ -0.54
VARS2-213ENST00000625423 ZNF180Q9UJW8 692 aa11.68□□□□□ -0.54
VARS2-213ENST00000625423 AKT3Q9Y243 479 aa11.68□□□□□ -0.54
VARS2-213ENST00000625423 MAD1L1Q9Y6D9 718 aa11.68□□□□□ -0.54
VARS2-213ENST00000625423 BCLAF3A2AJT9 711 aaKnown RBP11.68□□□□□ -0.54
VARS2-213ENST00000625423 IRF6O14896 467 aa11.68□□□□□ -0.54
VARS2-213ENST00000625423 KLF11O14901 512 aa11.68□□□□□ -0.54
VARS2-213ENST00000625423 SMNDC1O75940 238 aaKnown RBP eCLIP11.68□□□□□ -0.543e-7■■□□□ 11.4
VARS2-213ENST00000625423 LUC7L3O95232 432 aaKnown RBP11.68□□□□□ -0.54
VARS2-213ENST00000625423 LMNAP02545 664 aaKnown RBP11.68□□□□□ -0.54
VARS2-213ENST00000625423 APOEP02649 317 aa11.68□□□□□ -0.54
VARS2-213ENST00000625423 VTNP04004 478 aa11.68□□□□□ -0.54
VARS2-213ENST00000625423 INSRRP14616 1297 aa11.68□□□□□ -0.54
VARS2-213ENST00000625423 SDC4P31431 198 aa11.68□□□□□ -0.54
VARS2-213ENST00000625423 SLC26A2P50443 739 aa11.68□□□□□ -0.54
VARS2-213ENST00000625423 BST1Q10588 318 aa11.68□□□□□ -0.54
VARS2-213ENST00000625423 Q3C1V9 767 aa11.68□□□□□ -0.54
VARS2-213ENST00000625423 CES4AQ5XG92 561 aa11.68□□□□□ -0.54
VARS2-213ENST00000625423 SLC9A4Q6AI14 798 aa11.68□□□□□ -0.54
VARS2-213ENST00000625423 TRMT10BQ6PF06 316 aaKnown RBP11.68□□□□□ -0.54
VARS2-213ENST00000625423 OLFML1Q6UWY5 402 aa11.68□□□□□ -0.54
VARS2-213ENST00000625423 NFKBIZQ9BYH8 718 aa11.68□□□□□ -0.54
VARS2-213ENST00000625423 TRIM6Q9C030 488 aaPredicted RBP11.68□□□□□ -0.54
VARS2-213ENST00000625423 SPON1Q9HCB6 807 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms