RNA–Protein interactions for RNA: ENST00000624953.1

CDKL5-208, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 4

Gene CDKL5, Length 567 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-208ENST00000624953 SALL3Q9BXA9 1300 aa3.84□□□□□ -1.79
CDKL5-208ENST00000624953 DOCK1Q14185 1865 aa3.84□□□□□ -1.8
CDKL5-208ENST00000624953 MYO5AQ9Y4I1 1855 aaKnown RBP3.84□□□□□ -1.8
CDKL5-208ENST00000624953 RLFQ13129 1914 aa3.83□□□□□ -1.8
CDKL5-208ENST00000624953 FRS3O43559 492 aa3.83□□□□□ -1.8
CDKL5-208ENST00000624953 AP1G1O43747 822 aa3.83□□□□□ -1.8
CDKL5-208ENST00000624953 BBOX1O75936 387 aa3.83□□□□□ -1.8
CDKL5-208ENST00000624953 RHOBTB3O94955 611 aa3.83□□□□□ -1.8
CDKL5-208ENST00000624953 AHSGP02765 367 aa3.83□□□□□ -1.8
CDKL5-208ENST00000624953 S100BP04271 92 aaPredicted RBP3.83□□□□□ -1.8
CDKL5-208ENST00000624953 U2AF1L5P0DN76 240 aaPredicted RBP3.83□□□□□ -1.8
CDKL5-208ENST00000624953 PCSK6P29122 969 aa3.83□□□□□ -1.8
CDKL5-208ENST00000624953 FKBP1BP68106 108 aa3.83□□□□□ -1.8
CDKL5-208ENST00000624953 U2AF1Q01081 240 aaKnown RBP eCLIP3.83□□□□□ -1.8
CDKL5-208ENST00000624953 GBX1Q14549 363 aa3.83□□□□□ -1.8
CDKL5-208ENST00000624953 TAF7Q15545 349 aaPredicted RBP3.83□□□□□ -1.8
CDKL5-208ENST00000624953 KRT24Q2M2I5 525 aa3.83□□□□□ -1.8
CDKL5-208ENST00000624953 PARP10Q53GL7 1025 aa3.83□□□□□ -1.8
CDKL5-208ENST00000624953 PRR16Q569H4 304 aa3.83□□□□□ -1.8
CDKL5-208ENST00000624953 IFIT1BQ5T764 474 aaKnown RBP3.83□□□□□ -1.8
CDKL5-208ENST00000624953 TAPT1Q6NXT6 567 aa3.83□□□□□ -1.8
CDKL5-208ENST00000624953 Q6ZNX1 250 aa3.83□□□□□ -1.8
CDKL5-208ENST00000624953 MICALCLQ6ZW33 695 aa3.83□□□□□ -1.8
CDKL5-208ENST00000624953 PPP1R42Q7Z4L9 355 aa3.83□□□□□ -1.8
CDKL5-208ENST00000624953 CLNKQ7Z7G1 428 aa3.83□□□□□ -1.8
CDKL5-208ENST00000624953 PPP1R35Q8TAP8 253 aa3.83□□□□□ -1.8
CDKL5-208ENST00000624953 SSH3Q8TE77 659 aa3.83□□□□□ -1.8
CDKL5-208ENST00000624953 SLC35A4Q96G79 324 aa3.83□□□□□ -1.8
CDKL5-208ENST00000624953 ZBED3Q96IU2 234 aaPredicted RBP3.83□□□□□ -1.8
CDKL5-208ENST00000624953 ZNF333Q96JL9 665 aa3.83□□□□□ -1.8
CDKL5-208ENST00000624953 CLMNQ96JQ2 1002 aa3.83□□□□□ -1.8
CDKL5-208ENST00000624953 PLEKHF1Q96S99 279 aa3.83□□□□□ -1.8
CDKL5-208ENST00000624953 TTPALQ9BTX7 342 aa3.83□□□□□ -1.8
CDKL5-208ENST00000624953 UTP14AQ9BVJ6 771 aaKnown RBP3.83□□□□□ -1.8
CDKL5-208ENST00000624953 TINAGL1Q9GZM7 467 aaPredicted RBP3.83□□□□□ -1.8
CDKL5-208ENST00000624953 MYOZ2Q9NPC6 264 aa3.83□□□□□ -1.8
CDKL5-208ENST00000624953 C11orf21Q9P2W6 132 aa3.83□□□□□ -1.8
CDKL5-208ENST00000624953 FEZ2Q9UHY8 353 aaPredicted RBP3.83□□□□□ -1.8
CDKL5-208ENST00000624953 LOC285556D6RIA3 1793 aa3.83□□□□□ -1.8
CDKL5-208ENST00000624953 MYH2Q9UKX2 1941 aa3.83□□□□□ -1.8
CDKL5-208ENST00000624953 SIPA1L1O43166 1804 aa3.82□□□□□ -1.8
CDKL5-208ENST00000624953 COL1A1P02452 1464 aaPredicted RBP3.82□□□□□ -1.8
CDKL5-208ENST00000624953 SH3TC1Q8TE82 1336 aa3.82□□□□□ -1.8
CDKL5-208ENST00000624953 MYO1FO00160 1098 aa3.82□□□□□ -1.8
CDKL5-208ENST00000624953 DCLK1O15075 740 aa3.82□□□□□ -1.8
CDKL5-208ENST00000624953 RAMP2O60895 175 aa3.82□□□□□ -1.8
CDKL5-208ENST00000624953 SOAT2O75908 522 aa3.82□□□□□ -1.8
CDKL5-208ENST00000624953 PIM1P11309 404 aaPredicted RBP3.82□□□□□ -1.8
CDKL5-208ENST00000624953 HTR1BP28222 390 aa3.82□□□□□ -1.8
CDKL5-208ENST00000624953 CTGFP29279 349 aa3.82□□□□□ -1.8
CDKL5-208ENST00000624953 AVPR1BP47901 424 aa3.82□□□□□ -1.8
CDKL5-208ENST00000624953 RPS7P62081 194 aaKnown RBP3.82□□□□□ -1.8
CDKL5-208ENST00000624953 PIGFQ07326 219 aa3.82□□□□□ -1.8
CDKL5-208ENST00000624953 PRKG1Q13976 671 aa3.82□□□□□ -1.8
CDKL5-208ENST00000624953 ZNF169Q14929 603 aaPredicted RBP3.82□□□□□ -1.8
CDKL5-208ENST00000624953 PPP2R5AQ15172 486 aa3.82□□□□□ -1.8
CDKL5-208ENST00000624953 PTPRRQ15256 657 aa3.82□□□□□ -1.8
CDKL5-208ENST00000624953 SF3B3Q15393 1217 aaKnown RBP3.82□□□□□ -1.8
CDKL5-208ENST00000624953 SPDYE7PQ495Y7 208 aa3.82□□□□□ -1.8
CDKL5-208ENST00000624953 KIF6Q6ZMV9 814 aa3.82□□□□□ -1.8
CDKL5-208ENST00000624953 COPS6Q7L5N1 327 aa3.82□□□□□ -1.8
CDKL5-208ENST00000624953 UBE2Q1Q7Z7E8 422 aa3.82□□□□□ -1.8
CDKL5-208ENST00000624953 CHPFQ8IZ52 775 aa3.82□□□□□ -1.8
CDKL5-208ENST00000624953 CELF5Q8N6W0 485 aaKnown RBP3.82□□□□□ -1.8
CDKL5-208ENST00000624953 ZBTB34Q8NCN2 500 aa3.82□□□□□ -1.8
CDKL5-208ENST00000624953 GPR150Q8NGU9 434 aa3.82□□□□□ -1.8
CDKL5-208ENST00000624953 KBTBD7Q8WVZ9 684 aa3.82□□□□□ -1.8
CDKL5-208ENST00000624953 ANKS1AQ92625 1134 aa3.82□□□□□ -1.8
CDKL5-208ENST00000624953 Q96MF0 132 aa3.82□□□□□ -1.8
CDKL5-208ENST00000624953 CNPPD1Q9BV87 410 aa3.82□□□□□ -1.8
CDKL5-208ENST00000624953 TRIM54Q9BYV2 358 aa3.82□□□□□ -1.8
CDKL5-208ENST00000624953 ARHGAP39Q9C0H5 1083 aa3.82□□□□□ -1.8
CDKL5-208ENST00000624953 ST6GALNAC1Q9NSC7 600 aaPredicted RBP3.82□□□□□ -1.8
CDKL5-208ENST00000624953 L1RE1Q9UN81 338 aa3.82□□□□□ -1.8
CDKL5-208ENST00000624953 CDYLQ9Y232 598 aa3.82□□□□□ -1.8
CDKL5-208ENST00000624953 NOX1Q9Y5S8 564 aa3.82□□□□□ -1.8
CDKL5-208ENST00000624953 TCF20Q9UGU0 1960 aaKnown RBP3.82□□□□□ -1.8
CDKL5-208ENST00000624953 ZNFX1Q9P2E3 1918 aaKnown RBP3.82□□□□□ -1.8
CDKL5-208ENST00000624953 FOCADQ5VW36 1801 aa3.81□□□□□ -1.8
CDKL5-208ENST00000624953 COL2A1P02458 1487 aaPredicted RBP3.81□□□□□ -1.8
CDKL5-208ENST00000624953 MYO9BQ13459 2157 aa3.81□□□□□ -1.8
CDKL5-208ENST00000624953 ZNF785A8K8V0 405 aa3.81□□□□□ -1.8
CDKL5-208ENST00000624953 ERC2O15083 957 aa3.81□□□□□ -1.8
CDKL5-208ENST00000624953 HTATSF1O43719 755 aaKnown RBP3.81□□□□□ -1.8
CDKL5-208ENST00000624953 C1QL1O75973 258 aa3.81□□□□□ -1.8
CDKL5-208ENST00000624953 ITGAMP11215 1152 aa3.81□□□□□ -1.8
CDKL5-208ENST00000624953 HDCP19113 662 aa3.81□□□□□ -1.8
CDKL5-208ENST00000624953 FBLP22087 321 aaKnown RBP3.81□□□□□ -1.8
CDKL5-208ENST00000624953 KLRK1P26718 216 aa3.81□□□□□ -1.8
CDKL5-208ENST00000624953 ZNF135P52742 658 aaPredicted RBP3.81□□□□□ -1.8
CDKL5-208ENST00000624953 MXRA7P84157 204 aa3.81□□□□□ -1.8
CDKL5-208ENST00000624953 ZNF844Q08AG5 666 aa3.81□□□□□ -1.8
CDKL5-208ENST00000624953 MPP3Q13368 585 aa3.81□□□□□ -1.8
CDKL5-208ENST00000624953 ANO6Q4KMQ2 910 aa3.81□□□□□ -1.8
CDKL5-208ENST00000624953 TAF2Q6P1X5 1199 aa3.81□□□□□ -1.8
CDKL5-208ENST00000624953 FOXR2Q6PJQ5 311 aa3.81□□□□□ -1.8
CDKL5-208ENST00000624953 OLFML1Q6UWY5 402 aa3.81□□□□□ -1.8
CDKL5-208ENST00000624953 USP37Q86T82 979 aa3.81□□□□□ -1.8
CDKL5-208ENST00000624953 COLGALT2Q8IYK4 626 aa3.81□□□□□ -1.8
CDKL5-208ENST00000624953 GRAMD1CQ8IYS0 662 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms