RNA–Protein interactions for RNA: ENST00000624700.3

CDKL5-207, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 4

Gene CDKL5, Length 564 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-207ENST00000624700 SRGAP2BP0DMP2 458 aa4.9□□□□□ -1.63
CDKL5-207ENST00000624700 TMEM225BP0DP42 221 aa4.9□□□□□ -1.63
CDKL5-207ENST00000624700 CREB1P16220 341 aa4.9□□□□□ -1.63
CDKL5-207ENST00000624700 MST1P26927 711 aa4.9□□□□□ -1.63
CDKL5-207ENST00000624700 CYP2C18P33260 490 aa4.9□□□□□ -1.63
CDKL5-207ENST00000624700 EEFSECP57772 596 aaKnown RBP4.9□□□□□ -1.63
CDKL5-207ENST00000624700 SP2Q02086 613 aa4.9□□□□□ -1.63
CDKL5-207ENST00000624700 FOXO1Q12778 655 aa4.9□□□□□ -1.63
CDKL5-207ENST00000624700 PFKFB4Q16877 469 aa4.9□□□□□ -1.63
CDKL5-207ENST00000624700 CCDC38Q502W7 563 aa4.9□□□□□ -1.63
CDKL5-207ENST00000624700 RAP1GAP2Q684P5 730 aa4.9□□□□□ -1.63
CDKL5-207ENST00000624700 ABLIM2Q6H8Q1 611 aa4.9□□□□□ -1.63
CDKL5-207ENST00000624700 CLEC9AQ6UXN8 241 aa4.9□□□□□ -1.63
CDKL5-207ENST00000624700 Q6ZWC4 215 aa4.9□□□□□ -1.63
CDKL5-207ENST00000624700 USP49Q70CQ1 688 aa4.9□□□□□ -1.63
CDKL5-207ENST00000624700 PEG10Q86TG7 708 aaKnown RBP4.9□□□□□ -1.63
CDKL5-207ENST00000624700 SFTPA1Q8IWL2 248 aa4.9□□□□□ -1.63
CDKL5-207ENST00000624700 FSTL5Q8N475 847 aaPredicted RBP4.9□□□□□ -1.63
CDKL5-207ENST00000624700 SPATA5Q8NB90 893 aa4.9□□□□□ -1.63
CDKL5-207ENST00000624700 FAM71BQ8TC56 605 aa4.9□□□□□ -1.63
CDKL5-207ENST00000624700 TBC1D5Q92609 795 aa4.9□□□□□ -1.63
CDKL5-207ENST00000624700 VOPP1Q96AW1 172 aa4.9□□□□□ -1.63
CDKL5-207ENST00000624700 TIMP4Q99727 224 aa4.9□□□□□ -1.63
CDKL5-207ENST00000624700 PAGR1Q9BTK6 254 aa4.9□□□□□ -1.63
CDKL5-207ENST00000624700 DUSP26Q9BV47 211 aa4.9□□□□□ -1.63
CDKL5-207ENST00000624700 AGO4Q9HCK5 861 aaKnown RBP4.9□□□□□ -1.63
CDKL5-207ENST00000624700 SNX15Q9NRS6 342 aa4.9□□□□□ -1.63
CDKL5-207ENST00000624700 MGAT4CQ9UBM8 478 aa4.9□□□□□ -1.63
CDKL5-207ENST00000624700 AMFRQ9UKV5 643 aa4.9□□□□□ -1.63
CDKL5-207ENST00000624700 NFU1Q9UMS0 254 aa4.9□□□□□ -1.63
CDKL5-207ENST00000624700 SLC27A6Q9Y2P4 619 aa4.9□□□□□ -1.63
CDKL5-207ENST00000624700 RIPOR2Q9Y4F9 1068 aa4.9□□□□□ -1.63
CDKL5-207ENST00000624700 NPC1O15118 1278 aa4.89□□□□□ -1.63
CDKL5-207ENST00000624700 NPPBP16860 134 aa4.89□□□□□ -1.63
CDKL5-207ENST00000624700 WT1P19544 449 aaPredicted RBP4.89□□□□□ -1.63
CDKL5-207ENST00000624700 MMP8P22894 467 aa4.89□□□□□ -1.63
CDKL5-207ENST00000624700 CCT8P50990 548 aa4.89□□□□□ -1.63
CDKL5-207ENST00000624700 CACNA2D1P54289 1103 aa4.89□□□□□ -1.63
CDKL5-207ENST00000624700 EIF4A1P60842 406 aaKnown RBP4.89□□□□□ -1.63
CDKL5-207ENST00000624700 ACOX1Q15067 660 aa4.89□□□□□ -1.63
CDKL5-207ENST00000624700 ELF2Q15723 593 aa4.89□□□□□ -1.63
CDKL5-207ENST00000624700 TMTC4Q5T4D3 741 aa4.89□□□□□ -1.63
CDKL5-207ENST00000624700 PTCHD4Q6ZW05 846 aa4.89□□□□□ -1.63
CDKL5-207ENST00000624700 TRIM63Q969Q1 353 aa4.89□□□□□ -1.63
CDKL5-207ENST00000624700 PRPF18Q99633 342 aaKnown RBP4.89□□□□□ -1.63
CDKL5-207ENST00000624700 OBP2BQ9NPH6 170 aa4.89□□□□□ -1.63
CDKL5-207ENST00000624700 DUSP22Q9NRW4 184 aa4.89□□□□□ -1.63
CDKL5-207ENST00000624700 DLL3Q9NYJ7 618 aa4.89□□□□□ -1.63
CDKL5-207ENST00000624700 ENTPD2Q9Y5L3 495 aa4.89□□□□□ -1.63
CDKL5-207ENST00000624700 SYT5O00445 386 aa4.88□□□□□ -1.63
CDKL5-207ENST00000624700 WDR47O94967 919 aa4.88□□□□□ -1.63
CDKL5-207ENST00000624700 ITGA5P08648 1049 aa4.88□□□□□ -1.63
CDKL5-207ENST00000624700 SERPINF1P36955 418 aa4.88□□□□□ -1.63
CDKL5-207ENST00000624700 ALDH18A1P54886 795 aaKnown RBP4.88□□□□□ -1.63
CDKL5-207ENST00000624700 SIM1P81133 766 aaPredicted RBP4.88□□□□□ -1.63
CDKL5-207ENST00000624700 CSHL1Q14406 222 aa4.88□□□□□ -1.63
CDKL5-207ENST00000624700 ATPAF1Q5TC12 328 aaPredicted RBP4.88□□□□□ -1.63
CDKL5-207ENST00000624700 CEP85Q6P2H3 762 aa4.88□□□□□ -1.63
CDKL5-207ENST00000624700 GGT6Q6P531 493 aa4.88□□□□□ -1.63
CDKL5-207ENST00000624700 CCT6BQ92526 530 aa4.88□□□□□ -1.63
CDKL5-207ENST00000624700 WDR24Q96S15 920 aa4.88□□□□□ -1.63
CDKL5-207ENST00000624700 RMDN3Q96TC7 470 aa4.88□□□□□ -1.63
CDKL5-207ENST00000624700 CINPQ9BW66 212 aaPredicted RBP4.88□□□□□ -1.63
CDKL5-207ENST00000624700 FSD1LQ9BXM9 530 aa4.88□□□□□ -1.63
CDKL5-207ENST00000624700 TP63Q9H3D4 680 aaPredicted RBP4.88□□□□□ -1.63
CDKL5-207ENST00000624700 DACT1Q9NYF0 836 aa4.88□□□□□ -1.63
CDKL5-207ENST00000624700 HERC5Q9UII4 1024 aaKnown RBP4.88□□□□□ -1.63
CDKL5-207ENST00000624700 RIMKLBQ9ULI2 386 aa4.88□□□□□ -1.63
CDKL5-207ENST00000624700 INSL6Q9Y581 213 aa4.88□□□□□ -1.63
CDKL5-207ENST00000624700 PCSK5Q92824 1860 aa4.88□□□□□ -1.63
CDKL5-207ENST00000624700 PNMA6EA0A0J9YXQ4 647 aa4.87□□□□□ -1.63
CDKL5-207ENST00000624700 CES2O00748 559 aa4.87□□□□□ -1.63
CDKL5-207ENST00000624700 PIP5K1BO14986 540 aa4.87□□□□□ -1.63
CDKL5-207ENST00000624700 JTBO76095 146 aa4.87□□□□□ -1.63
CDKL5-207ENST00000624700 FGAP02671 866 aa4.87□□□□□ -1.63
CDKL5-207ENST00000624700 ANXA6P08133 673 aa4.87□□□□□ -1.63
CDKL5-207ENST00000624700 ITGA2BP08514 1039 aa4.87□□□□□ -1.63
CDKL5-207ENST00000624700 EBLN1P0CF75 366 aa4.87□□□□□ -1.63
CDKL5-207ENST00000624700 ARP10275 920 aa4.87□□□□□ -1.63
CDKL5-207ENST00000624700 PECAM1P16284 738 aaPredicted RBP4.87□□□□□ -1.63
CDKL5-207ENST00000624700 ZNF37AP17032 561 aaPredicted RBP4.87□□□□□ -1.63
CDKL5-207ENST00000624700 ADRA1DP25100 572 aa4.87□□□□□ -1.63
CDKL5-207ENST00000624700 GRK6P43250 576 aa4.87□□□□□ -1.63
CDKL5-207ENST00000624700 CLCN2P51788 898 aa4.87□□□□□ -1.63
CDKL5-207ENST00000624700 TRIM14Q14142 442 aa4.87□□□□□ -1.63
CDKL5-207ENST00000624700 KCNJ12Q14500 433 aa4.87□□□□□ -1.63
CDKL5-207ENST00000624700 ARHGAP15Q53QZ3 475 aa4.87□□□□□ -1.63
CDKL5-207ENST00000624700 PCID2Q5JVF3 399 aa4.87□□□□□ -1.63
CDKL5-207ENST00000624700 RFX8Q6ZV50 586 aa4.87□□□□□ -1.63
CDKL5-207ENST00000624700 SLC29A4Q7RTT9 530 aa4.87□□□□□ -1.63
CDKL5-207ENST00000624700 C11orf44Q8N8P7 122 aa4.87□□□□□ -1.63
CDKL5-207ENST00000624700 PNPLA1Q8N8W4 532 aa4.87□□□□□ -1.63
CDKL5-207ENST00000624700 NELL1Q92832 810 aa4.87□□□□□ -1.63
CDKL5-207ENST00000624700 CTHRC1Q96CG8 243 aa4.87□□□□□ -1.63
CDKL5-207ENST00000624700 EIF3CQ99613 913 aaKnown RBP4.87□□□□□ -1.63
CDKL5-207ENST00000624700 IGSF9Q9P2J2 1179 aa4.87□□□□□ -1.63
CDKL5-207ENST00000624700 TLK1Q9UKI8 766 aa4.87□□□□□ -1.63
CDKL5-207ENST00000624700 ADAMTS5Q9UNA0 930 aa4.87□□□□□ -1.63
CDKL5-207ENST00000624700 SALL3Q9BXA9 1300 aa4.87□□□□□ -1.63
CDKL5-207ENST00000624700 LINC00473A8K010 186 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms