RNA–Protein interactions for RNA: ENST00000623056.3

LDB3-209, Transcript of LIM domain binding 3, humanhuman

TSL 5 BASIC

Gene LDB3, Length 2,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-209ENST00000623056 TFAP2AP05549 437 aa14.64□□□□□ -0.07
LDB3-209ENST00000623056 RFC1P35251 1148 aaPredicted RBP14.64□□□□□ -0.07
LDB3-209ENST00000623056 LIG4P49917 911 aa14.64□□□□□ -0.07
LDB3-209ENST00000623056 YWHAZP63104 245 aaKnown RBP14.64□□□□□ -0.07
LDB3-209ENST00000623056 TLR1Q15399 786 aa14.64□□□□□ -0.07
LDB3-209ENST00000623056 ZYXQ15942 572 aaKnown RBP14.64□□□□□ -0.07
LDB3-209ENST00000623056 GRAMD1BQ3KR37 738 aa14.64□□□□□ -0.07
LDB3-209ENST00000623056 LGSNQ5TDP6 509 aa14.64□□□□□ -0.07
LDB3-209ENST00000623056 OLFML2BQ68BL8 750 aa14.64□□□□□ -0.07
LDB3-209ENST00000623056 SCARA3Q6AZY7 606 aa14.64□□□□□ -0.07
LDB3-209ENST00000623056 KLHDC10Q6PID8 442 aa14.64□□□□□ -0.07
LDB3-209ENST00000623056 ACTRT2Q8TDY3 377 aa14.64□□□□□ -0.07
LDB3-209ENST00000623056 ZNF778Q96MU6 729 aa14.64□□□□□ -0.07
LDB3-209ENST00000623056 GCNAQ96QF7 691 aa14.64□□□□□ -0.07
LDB3-209ENST00000623056 DEFB129Q9H1M3 183 aa14.64□□□□□ -0.07
LDB3-209ENST00000623056 DBNDD1Q9H9R9 158 aa14.64□□□□□ -0.07
LDB3-209ENST00000623056 CYP4F11Q9HBI6 524 aa14.64□□□□□ -0.07
LDB3-209ENST00000623056 USP29Q9HBJ7 922 aa14.64□□□□□ -0.07
LDB3-209ENST00000623056 SMYD2Q9NRG4 433 aa14.64□□□□□ -0.07
LDB3-209ENST00000623056 CIDEBQ9UHD4 219 aa14.64□□□□□ -0.07
LDB3-209ENST00000623056 POMPQ9Y244 141 aa14.64□□□□□ -0.07
LDB3-209ENST00000623056 CAPN8A6NHC0 703 aa14.63□□□□□ -0.07
LDB3-209ENST00000623056 WDR64B1ANS9 1081 aa14.63□□□□□ -0.07
LDB3-209ENST00000623056 BIRC5O15392 142 aa14.63□□□□□ -0.07
LDB3-209ENST00000623056 PFDN1O60925 122 aa14.63□□□□□ -0.07
LDB3-209ENST00000623056 STAM2O75886 525 aa14.63□□□□□ -0.07
LDB3-209ENST00000623056 KLHL2O95198 593 aa14.63□□□□□ -0.07
LDB3-209ENST00000623056 ALDH1B1P30837 517 aa14.63□□□□□ -0.07
LDB3-209ENST00000623056 L1CAMP32004 1257 aa14.63□□□□□ -0.07
LDB3-209ENST00000623056 FDFT1P37268 417 aa14.63□□□□□ -0.07
LDB3-209ENST00000623056 JAK3P52333 1124 aa14.63□□□□□ -0.07
LDB3-209ENST00000623056 SNAPC2Q13487 334 aa14.63□□□□□ -0.07
LDB3-209ENST00000623056 NDUFAF2Q8N183 169 aa14.63□□□□□ -0.07
LDB3-209ENST00000623056 WDTC1Q8N5D0 677 aa14.63□□□□□ -0.07
LDB3-209ENST00000623056 TMEM35BQ8NCS4 154 aa14.63□□□□□ -0.07
LDB3-209ENST00000623056 CEP170P1Q96L14 293 aa14.63□□□□□ -0.07
LDB3-209ENST00000623056 CSRNP1Q96S65 589 aa14.63□□□□□ -0.07
LDB3-209ENST00000623056 MMP19Q99542 508 aa14.63□□□□□ -0.07
LDB3-209ENST00000623056 PLAC1Q9HBJ0 212 aa14.63□□□□□ -0.07
LDB3-209ENST00000623056 RHBDL2Q9NX52 303 aa14.63□□□□□ -0.07
LDB3-209ENST00000623056 AGO2Q9UKV8 859 aaKnown RBP14.63□□□□□ -0.07
LDB3-209ENST00000623056 ITGA11Q9UKX5 1188 aa14.63□□□□□ -0.07
LDB3-209ENST00000623056 SSX2IPQ9Y2D8 614 aa14.63□□□□□ -0.07
LDB3-209ENST00000623056 INPP5FQ9Y2H2 1132 aa14.63□□□□□ -0.07
LDB3-209ENST00000623056 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.63□□□□□ -0.07
LDB3-209ENST00000623056 TTLL13PA6NNM8 815 aa14.63□□□□□ -0.07
LDB3-209ENST00000623056 SIN3BO75182 1162 aa14.63□□□□□ -0.07
LDB3-209ENST00000623056 LYPLA1O75608 230 aaPredicted RBP14.63□□□□□ -0.07
LDB3-209ENST00000623056 TOM1L1O75674 476 aa14.63□□□□□ -0.07
LDB3-209ENST00000623056 TOP3BO95985 862 aaKnown RBP14.63□□□□□ -0.07
LDB3-209ENST00000623056 CLPTM1O96005 669 aa14.63□□□□□ -0.07
LDB3-209ENST00000623056 PRKCHP24723 683 aa14.63□□□□□ -0.07
LDB3-209ENST00000623056 CRHR1P34998 444 aa14.63□□□□□ -0.07
LDB3-209ENST00000623056 IRX4P78413 519 aa14.63□□□□□ -0.07
LDB3-209ENST00000623056 ROR1Q01973 937 aa14.63□□□□□ -0.07
LDB3-209ENST00000623056 HADHQ16836 314 aaKnown RBP14.63□□□□□ -0.07
LDB3-209ENST00000623056 TCHHL1Q5QJ38 904 aaPredicted RBP14.63□□□□□ -0.07
LDB3-209ENST00000623056 GPAT2Q6NUI2 795 aa14.63□□□□□ -0.07
LDB3-209ENST00000623056 ARCQ7LC44 396 aa14.63□□□□□ -0.07
LDB3-209ENST00000623056 HPS6Q86YV9 775 aa14.63□□□□□ -0.07
LDB3-209ENST00000623056 WDR75Q8IWA0 830 aaKnown RBP14.63□□□□□ -0.07
LDB3-209ENST00000623056 KIAA0319LQ8IZA0 1049 aa14.63□□□□□ -0.07
LDB3-209ENST00000623056 MARVELD2Q8N4S9 558 aa14.63□□□□□ -0.07
LDB3-209ENST00000623056 CCDC33Q8N5R6 958 aa14.63□□□□□ -0.07
LDB3-209ENST00000623056 METTL25Q8N6Q8 603 aa14.63□□□□□ -0.07
LDB3-209ENST00000623056 EFCAB3Q8N7B9 438 aa14.63□□□□□ -0.07
LDB3-209ENST00000623056 UBR7Q8N806 425 aa14.63□□□□□ -0.07
LDB3-209ENST00000623056 JOSD2Q8TAC2 188 aa14.63□□□□□ -0.07
LDB3-209ENST00000623056 SPATA18Q8TC71 538 aa14.63□□□□□ -0.07
LDB3-209ENST00000623056 FAF2Q96CS3 445 aa14.63□□□□□ -0.07
LDB3-209ENST00000623056 MRIQ9BWK5 157 aa14.63□□□□□ -0.07
LDB3-209ENST00000623056 SHCBP1LQ9BZQ2 653 aa14.63□□□□□ -0.07
LDB3-209ENST00000623056 POPDC2Q9HBU9 364 aa14.63□□□□□ -0.07
LDB3-209ENST00000623056 ARHGAP28Q9P2N2 729 aa14.63□□□□□ -0.07
LDB3-209ENST00000623056 ZC3H7BQ9UGR2 993 aaKnown RBP14.63□□□□□ -0.07
LDB3-209ENST00000623056 CCPG1Q9ULG6 757 aa14.63□□□□□ -0.07
LDB3-209ENST00000623056 DNAJC16Q9Y2G8 782 aa14.63□□□□□ -0.07
LDB3-209ENST00000623056 DTNAQ9Y4J8 743 aa14.63□□□□□ -0.07
LDB3-209ENST00000623056 BTBD19C9JJ37 291 aa14.62□□□□□ -0.07
LDB3-209ENST00000623056 CHADO15335 359 aa14.62□□□□□ -0.07
LDB3-209ENST00000623056 ITM2AO43736 263 aa14.62□□□□□ -0.07
LDB3-209ENST00000623056 CSH1P0DML2 217 aa14.62□□□□□ -0.07
LDB3-209ENST00000623056 CSH2P0DML3 217 aa14.62□□□□□ -0.07
LDB3-209ENST00000623056 NADK2Q4G0N4 442 aa14.62□□□□□ -0.07
LDB3-209ENST00000623056 OGFRL1Q5TC84 451 aaPredicted RBP14.62□□□□□ -0.07
LDB3-209ENST00000623056 DARS2Q6PI48 645 aaKnown RBP14.62□□□□□ -0.07
LDB3-209ENST00000623056 ISLR2Q6UXK2 745 aa14.62□□□□□ -0.07
LDB3-209ENST00000623056 KCTD6Q8NC69 237 aa14.62□□□□□ -0.07
LDB3-209ENST00000623056 OR5B17Q8NGF7 314 aa14.62□□□□□ -0.07
LDB3-209ENST00000623056 PPP1R14CQ8TAE6 165 aa14.62□□□□□ -0.07
LDB3-209ENST00000623056 PIWIL2Q8TC59 973 aaKnown RBP14.62□□□□□ -0.07
LDB3-209ENST00000623056 MIPOL1Q8TD10 442 aa14.62□□□□□ -0.07
LDB3-209ENST00000623056 LZICQ8WZA0 190 aa14.62□□□□□ -0.07
LDB3-209ENST00000623056 APBB2Q92870 758 aa14.62□□□□□ -0.07
LDB3-209ENST00000623056 PLEKHG4BQ96PX9 1271 aa14.62□□□□□ -0.07
LDB3-209ENST00000623056 CAMKK2Q96RR4 588 aa14.62□□□□□ -0.07
LDB3-209ENST00000623056 SIKE1Q9BRV8 207 aa14.62□□□□□ -0.07
LDB3-209ENST00000623056 TDRD3Q9H7E2 651 aaKnown RBP14.62□□□□□ -0.07
LDB3-209ENST00000623056 DDX18Q9NVP1 670 aaKnown RBP14.62□□□□□ -0.07
LDB3-209ENST00000623056 RBAKQ9NYW8 714 aaPredicted RBP14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms