RNA–Protein interactions for RNA: ENST00000622972.3

LINC00963-215, long intergenic non-protein coding RNA 963, human

TSL 5

Gene LINC00963, Length 444 nt, Biotype lincRNA, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC00963-215	ENST00000622972	RMDN1	Q96DB5	314 aa		6.24	□□□□□ -1.41
LINC00963-215	ENST00000622972	RSPRY1	Q96DX4	576 aa		6.24	□□□□□ -1.41
LINC00963-215	ENST00000622972	HPDL	Q96IR7	371 aa		6.24	□□□□□ -1.41
LINC00963-215	ENST00000622972	NAP1L5	Q96NT1	182 aa	Predicted RBP	6.24	□□□□□ -1.41
LINC00963-215	ENST00000622972	MMS19	Q96T76	1030 aa		6.24	□□□□□ -1.41
LINC00963-215	ENST00000622972	INSM2	Q96T92	566 aa	Predicted RBP	6.24	□□□□□ -1.41
LINC00963-215	ENST00000622972	TSG101	Q99816	390 aa		6.24	□□□□□ -1.41
LINC00963-215	ENST00000622972	CRACR2A	Q9BSW2	395 aa		6.24	□□□□□ -1.41
LINC00963-215	ENST00000622972	LRRC3	Q9BY71	257 aa		6.24	□□□□□ -1.41
LINC00963-215	ENST00000622972	RBSN	Q9H1K0	784 aa		6.24	□□□□□ -1.41
LINC00963-215	ENST00000622972	GAN	Q9H2C0	597 aa		6.24	□□□□□ -1.41
LINC00963-215	ENST00000622972	THAP9	Q9H5L6	903 aa		6.24	□□□□□ -1.41
LINC00963-215	ENST00000622972	ETNK1	Q9HBU6	452 aa		6.24	□□□□□ -1.41
LINC00963-215	ENST00000622972	TMEM8A	Q9HCN3	771 aa		6.24	□□□□□ -1.41
LINC00963-215	ENST00000622972	TRPV5	Q9NQA5	729 aa		6.24	□□□□□ -1.41
LINC00963-215	ENST00000622972	PRMT8	Q9NR22	394 aa	Predicted RBP	6.24	□□□□□ -1.41
LINC00963-215	ENST00000622972	GKN1	Q9NS71	199 aa		6.24	□□□□□ -1.41
LINC00963-215	ENST00000622972	OBP2A	Q9NY56	170 aa		6.24	□□□□□ -1.41
LINC00963-215	ENST00000622972	UXT	Q9UBK9	157 aa	Predicted RBP	6.24	□□□□□ -1.41
LINC00963-215	ENST00000622972	LIMA1	Q9UHB6	759 aa	Known RBP	6.24	□□□□□ -1.41
LINC00963-215	ENST00000622972	SIK3	Q9Y2K2	1263 aa		6.24	□□□□□ -1.41
LINC00963-215	ENST00000622972	FRMD4B	Q9Y2L6	1034 aa		6.24	□□□□□ -1.41
LINC00963-215	ENST00000622972	FANCM	Q8IYD8	2048 aa		6.24	□□□□□ -1.41
LINC00963-215	ENST00000622972	ZFHX2	Q9C0A1	2572 aa	Predicted RBP	6.24	□□□□□ -1.41
LINC00963-215	ENST00000622972	NCAN	O14594	1321 aa		6.24	□□□□□ -1.41
LINC00963-215	ENST00000622972	BECN2	A8MW95	431 aa		6.23	□□□□□ -1.41
LINC00963-215	ENST00000622972	CHURC1-FNTB	B4DL54	471 aa		6.23	□□□□□ -1.41
LINC00963-215	ENST00000622972	PMM2	O15305	246 aa		6.23	□□□□□ -1.41
LINC00963-215	ENST00000622972	PRAMEF12	O95522	483 aa		6.23	□□□□□ -1.41
LINC00963-215	ENST00000622972	CKM	P06732	381 aa		6.23	□□□□□ -1.41
LINC00963-215	ENST00000622972	PDGFRB	P09619	1106 aa		6.23	□□□□□ -1.41
LINC00963-215	ENST00000622972	CCDC192	P0DO97	292 aa		6.23	□□□□□ -1.41
LINC00963-215	ENST00000622972	CHRNB1	P11230	501 aa		6.23	□□□□□ -1.41
LINC00963-215	ENST00000622972	SDHB	P21912	280 aa		6.23	□□□□□ -1.41
LINC00963-215	ENST00000622972	CYP2F1	P24903	491 aa		6.23	□□□□□ -1.41
LINC00963-215	ENST00000622972	DDX6	P26196	483 aa	Known RBP eCLIP	6.23	□□□□□ -1.41
LINC00963-215	ENST00000622972	ANXA13	P27216	316 aa		6.23	□□□□□ -1.41
LINC00963-215	ENST00000622972	PBX1	P40424	430 aa		6.23	□□□□□ -1.41
LINC00963-215	ENST00000622972	PIK3CA	P42336	1068 aa		6.23	□□□□□ -1.41
LINC00963-215	ENST00000622972	LHX1	P48742	406 aa		6.23	□□□□□ -1.41
LINC00963-215	ENST00000622972	FNTB	P49356	437 aa		6.23	□□□□□ -1.41
LINC00963-215	ENST00000622972	COPB1	P53618	953 aa	Known RBP	6.23	□□□□□ -1.41
LINC00963-215	ENST00000622972	PSMC1	P62191	440 aa	Known RBP	6.23	□□□□□ -1.41
LINC00963-215	ENST00000622972	NOP14	P78316	857 aa	Known RBP	6.23	□□□□□ -1.41
LINC00963-215	ENST00000622972	SATB1	Q01826	763 aa		6.23	□□□□□ -1.41
LINC00963-215	ENST00000622972	CYP27A1	Q02318	531 aa		6.23	□□□□□ -1.41
LINC00963-215	ENST00000622972	LMNB2	Q03252	620 aa		6.23	□□□□□ -1.41
LINC00963-215	ENST00000622972	FCHO2	Q0JRZ9	810 aa		6.23	□□□□□ -1.41
LINC00963-215	ENST00000622972	SPEM2	Q0P670	501 aa		6.23	□□□□□ -1.41
LINC00963-215	ENST00000622972	GRSF1	Q12849	480 aa	Known RBP eCLIP	6.23	□□□□□ -1.41
LINC00963-215	ENST00000622972	LRMP	Q12912	555 aa		6.23	□□□□□ -1.41
LINC00963-215	ENST00000622972	FZD5	Q13467	585 aa		6.23	□□□□□ -1.41
LINC00963-215	ENST00000622972	BIRC3	Q13489	604 aa		6.23	□□□□□ -1.41
LINC00963-215	ENST00000622972	SIM2	Q14190	667 aa	Predicted RBP	6.23	□□□□□ -1.41
LINC00963-215	ENST00000622972	SURF1	Q15526	300 aa		6.23	□□□□□ -1.41
LINC00963-215	ENST00000622972	MAN2A1	Q16706	1144 aa		6.23	□□□□□ -1.41
LINC00963-215	ENST00000622972	RSPO4	Q2I0M5	234 aa	Predicted RBP	6.23	□□□□□ -1.41
LINC00963-215	ENST00000622972	SKOR2	Q2VWA4	1001 aa	Predicted RBP	6.23	□□□□□ -1.41
LINC00963-215	ENST00000622972	ZNF699	Q32M78	642 aa		6.23	□□□□□ -1.41
LINC00963-215	ENST00000622972	CRTC2	Q53ET0	693 aa	Predicted RBP	6.23	□□□□□ -1.41
LINC00963-215	ENST00000622972	TCERG1L	Q5VWI1	586 aa		6.23	□□□□□ -1.41
LINC00963-215	ENST00000622972	E4F1	Q66K89	784 aa	Predicted RBP	6.23	□□□□□ -1.41
LINC00963-215	ENST00000622972	KRT39	Q6A163	491 aa		6.23	□□□□□ -1.41
LINC00963-215	ENST00000622972	TXNDC8	Q6A555	127 aa		6.23	□□□□□ -1.41
LINC00963-215	ENST00000622972	C4orf50	Q6ZRC1	276 aa		6.23	□□□□□ -1.41
LINC00963-215	ENST00000622972		Q6ZS52	159 aa		6.23	□□□□□ -1.41
LINC00963-215	ENST00000622972	PAQR9	Q6ZVX9	377 aa		6.23	□□□□□ -1.41
LINC00963-215	ENST00000622972	TMEM86A	Q8N2M4	240 aa		6.23	□□□□□ -1.41
LINC00963-215	ENST00000622972	SPEM1	Q8N4L4	309 aa		6.23	□□□□□ -1.41
LINC00963-215	ENST00000622972	SERBP1	Q8NC51	408 aa	Known RBP eCLIP	6.23	□□□□□ -1.41
LINC00963-215	ENST00000622972	RNF214	Q8ND24	703 aa		6.23	□□□□□ -1.41
LINC00963-215	ENST00000622972	SYAP1	Q96A49	352 aa	Predicted RBP	6.23	□□□□□ -1.41
LINC00963-215	ENST00000622972	EXOC4	Q96A65	974 aa		6.23	□□□□□ -1.41
LINC00963-215	ENST00000622972	FNBP1	Q96RU3	617 aa		6.23	□□□□□ -1.41
LINC00963-215	ENST00000622972	ACBD6	Q9BR61	282 aa		6.23	□□□□□ -1.41
LINC00963-215	ENST00000622972	TUBGCP2	Q9BSJ2	902 aa		6.23	□□□□□ -1.41
LINC00963-215	ENST00000622972	SLC46A2	Q9BY10	475 aa		6.23	□□□□□ -1.41
LINC00963-215	ENST00000622972	GTPBP4	Q9BZE4	634 aa	Known RBP	6.23	□□□□□ -1.41
LINC00963-215	ENST00000622972	ELOVL4	Q9GZR5	314 aa		6.23	□□□□□ -1.41
LINC00963-215	ENST00000622972	INTS2	Q9H0H0	1204 aa	Known RBP	6.23	□□□□□ -1.41
LINC00963-215	ENST00000622972	VPS16	Q9H269	839 aa		6.23	□□□□□ -1.41
LINC00963-215	ENST00000622972	EPC1	Q9H2F5	836 aa		6.23	□□□□□ -1.41
LINC00963-215	ENST00000622972	EBF3	Q9H4W6	596 aa		6.23	□□□□□ -1.41
LINC00963-215	ENST00000622972	ACP6	Q9NPH0	428 aa		6.23	□□□□□ -1.41
LINC00963-215	ENST00000622972	TDP1	Q9NUW8	608 aa		6.23	□□□□□ -1.41
LINC00963-215	ENST00000622972	MAGEC2	Q9UBF1	373 aa	Predicted RBP	6.23	□□□□□ -1.41
LINC00963-215	ENST00000622972	ZMYM5	Q9UJ78	669 aa		6.23	□□□□□ -1.41
LINC00963-215	ENST00000622972	GTF3C4	Q9UKN8	822 aa		6.23	□□□□□ -1.41
LINC00963-215	ENST00000622972	SLC8A2	Q9UPR5	921 aa		6.23	□□□□□ -1.41
LINC00963-215	ENST00000622972	FAM186A	A6NE01	2351 aa		6.22	□□□□□ -1.41
LINC00963-215	ENST00000622972	TRAV19	A0A0A6YYK7	116 aa		6.22	□□□□□ -1.41
LINC00963-215	ENST00000622972	MYBPHL	A2RUH7	354 aa		6.22	□□□□□ -1.41
LINC00963-215	ENST00000622972	LRRC10B	A6NIK2	292 aa		6.22	□□□□□ -1.41
LINC00963-215	ENST00000622972	SHISA7	A6NL88	538 aa		6.22	□□□□□ -1.41
LINC00963-215	ENST00000622972	TTLL8	A6PVC2	850 aa		6.22	□□□□□ -1.41
LINC00963-215	ENST00000622972	LGALS16	A8MUM7	142 aa		6.22	□□□□□ -1.41
LINC00963-215	ENST00000622972	ARNTL	O00327	626 aa		6.22	□□□□□ -1.41
LINC00963-215	ENST00000622972	MAN1A2	O60476	641 aa		6.22	□□□□□ -1.41
LINC00963-215	ENST00000622972	LILRB5	O75023	590 aa		6.22	□□□□□ -1.41
LINC00963-215	ENST00000622972	PHACTR2	O75167	634 aa		6.22	□□□□□ -1.41

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