RNA–Protein interactions for RNA: ENST00000621269.4

ATXN3-253, Transcript of ataxin 3, humanhuman

TSL 5 BASIC

Gene ATXN3, Length 936 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-253ENST00000621269 ANO7Q6IWH7 933 aa25.31■■□□□ 1.64
ATXN3-253ENST00000621269 NUDT18Q6ZVK8 323 aa25.31■■□□□ 1.64
ATXN3-253ENST00000621269 HTR3DQ70Z44 454 aa25.31■■□□□ 1.64
ATXN3-253ENST00000621269 TTC30AQ86WT1 665 aa25.31■■□□□ 1.64
ATXN3-253ENST00000621269 SFTPA1Q8IWL2 248 aa25.31■■□□□ 1.64
ATXN3-253ENST00000621269 TXNDC5Q8NBS9 432 aaKnown RBP25.31■■□□□ 1.64
ATXN3-253ENST00000621269 SMARCE1Q969G3 411 aa25.31■■□□□ 1.64
ATXN3-253ENST00000621269 WBP2Q969T9 261 aa25.31■■□□□ 1.64
ATXN3-253ENST00000621269 DUSP15Q9H1R2 295 aaPredicted RBP25.31■■□□□ 1.64
ATXN3-253ENST00000621269 CISHQ9NSE2 258 aa25.31■■□□□ 1.64
ATXN3-253ENST00000621269 DEC1Q9P2X7 70 aa25.31■■□□□ 1.64
ATXN3-253ENST00000621269 A0A1W2PQH9 124 aa25.3■■□□□ 1.64
ATXN3-253ENST00000621269 TBC1D3BA6NDS4 549 aa25.3■■□□□ 1.64
ATXN3-253ENST00000621269 SLC16A3O15427 465 aaKnown RBP25.3■■□□□ 1.64
ATXN3-253ENST00000621269 GDF9O60383 454 aa25.3■■□□□ 1.64
ATXN3-253ENST00000621269 RARGP13631 454 aa25.3■■□□□ 1.64
ATXN3-253ENST00000621269 GBP1P32455 592 aa25.3■■□□□ 1.64
ATXN3-253ENST00000621269 PSEN1P49768 467 aa25.3■■□□□ 1.64
ATXN3-253ENST00000621269 FKBP3Q00688 224 aaKnown RBP25.3■■□□□ 1.64
ATXN3-253ENST00000621269 SF3A2Q15428 464 aaKnown RBP25.3■■□□□ 1.64
ATXN3-253ENST00000621269 EOGTQ5NDL2 527 aa25.3■■□□□ 1.64
ATXN3-253ENST00000621269 EMC10Q5UCC4 262 aa25.3■■□□□ 1.64
ATXN3-253ENST00000621269 TADA2BQ86TJ2 420 aa25.3■■□□□ 1.64
ATXN3-253ENST00000621269 C11orf74Q86VG3 221 aa25.3■■□□□ 1.64
ATXN3-253ENST00000621269 RASSF3Q86WH2 238 aa25.3■■□□□ 1.64
ATXN3-253ENST00000621269 TMEM25Q86YD3 366 aa25.3■■□□□ 1.64
ATXN3-253ENST00000621269 IL17RCQ8NAC3 791 aa25.3■■□□□ 1.64
ATXN3-253ENST00000621269 ENGASEQ8NFI3 743 aa25.3■■□□□ 1.64
ATXN3-253ENST00000621269 TMEM176AQ96HP8 235 aa25.3■■□□□ 1.64
ATXN3-253ENST00000621269 CNOT6LQ96LI5 555 aaKnown RBP25.3■■□□□ 1.64
ATXN3-253ENST00000621269 TPSD1Q9BZJ3 242 aa25.3■■□□□ 1.64
ATXN3-253ENST00000621269 NMUR1Q9HB89 426 aa25.3■■□□□ 1.64
ATXN3-253ENST00000621269 OSER1Q9NX31 292 aa25.3■■□□□ 1.64
ATXN3-253ENST00000621269 DNMT3LQ9UJW3 386 aa25.3■■□□□ 1.64
ATXN3-253ENST00000621269 NAGPAQ9UK23 515 aa25.3■■□□□ 1.64
ATXN3-253ENST00000621269 INVSQ9Y283 1065 aa25.3■■□□□ 1.64
ATXN3-253ENST00000621269 KIAA1549LQ6ZVL6 1849 aa25.3■■□□□ 1.64
ATXN3-253ENST00000621269 ATG2BQ96BY7 2078 aa25.3■■□□□ 1.64
ATXN3-253ENST00000621269 TULP3O75386 442 aa25.29■■□□□ 1.64
ATXN3-253ENST00000621269 KIF11P52732 1056 aa25.29■■□□□ 1.64
ATXN3-253ENST00000621269 C10orf120Q5SQS8 335 aa25.29■■□□□ 1.64
ATXN3-253ENST00000621269 ANKRD40Q6AI12 368 aa25.29■■□□□ 1.64
ATXN3-253ENST00000621269 KLHDC10Q6PID8 442 aa25.29■■□□□ 1.64
ATXN3-253ENST00000621269 ETFBKMTQ8IXQ9 262 aa25.29■■□□□ 1.64
ATXN3-253ENST00000621269 FAM124BQ9H5Z6 455 aaPredicted RBP25.29■■□□□ 1.64
ATXN3-253ENST00000621269 POLMQ9NP87 494 aaPredicted RBP25.29■■□□□ 1.64
ATXN3-253ENST00000621269 MTPAPQ9NVV4 582 aaKnown RBP eCLIP25.29■■□□□ 1.64
ATXN3-253ENST00000621269 MYO16Q9Y6X6 1858 aa25.29■■□□□ 1.64
ATXN3-253ENST00000621269 RALAP11233 206 aa25.28■■□□□ 1.64
ATXN3-253ENST00000621269 MPLP40238 635 aa25.28■■□□□ 1.64
ATXN3-253ENST00000621269 KIR2DL1P43626 348 aaPredicted RBP25.28■■□□□ 1.64
ATXN3-253ENST00000621269 PLA2G4AP47712 749 aa25.28■■□□□ 1.64
ATXN3-253ENST00000621269 SLC8A3P57103 927 aa25.28■■□□□ 1.64
ATXN3-253ENST00000621269 TMEM92Q6UXU6 159 aa25.28■■□□□ 1.64
ATXN3-253ENST00000621269 CCDC186Q7Z3E2 898 aa25.28■■□□□ 1.64
ATXN3-253ENST00000621269 PHTF2Q8N3S3 785 aa25.28■■□□□ 1.64
ATXN3-253ENST00000621269 SLC4A11Q8NBS3 891 aa25.28■■□□□ 1.64
ATXN3-253ENST00000621269 ERCC4Q92889 916 aaPredicted RBP25.28■■□□□ 1.64
ATXN3-253ENST00000621269 TATDN2Q93075 761 aa25.28■■□□□ 1.64
ATXN3-253ENST00000621269 TIGD1Q96MW7 591 aa25.28■■□□□ 1.64
ATXN3-253ENST00000621269 VPS45Q9NRW7 570 aa25.28■■□□□ 1.64
ATXN3-253ENST00000621269 NUDT5Q9UKK9 219 aa25.28■■□□□ 1.64
ATXN3-253ENST00000621269 CACNA1AO00555 2505 aa25.28■■□□□ 1.64
ATXN3-253ENST00000621269 SGK1O00141 431 aa25.27■■□□□ 1.64
ATXN3-253ENST00000621269 RAD23BP54727 409 aa25.27■■□□□ 1.64
ATXN3-253ENST00000621269 LRRC63Q05C16 580 aa25.27■■□□□ 1.64
ATXN3-253ENST00000621269 STIM1Q13586 685 aa25.27■■□□□ 1.64
ATXN3-253ENST00000621269 PLA2G2CQ5R387 149 aa25.27■■□□□ 1.64
ATXN3-253ENST00000621269 MDGA1Q8NFP4 955 aa25.27■■□□□ 1.64
ATXN3-253ENST00000621269 SPATA20Q8TB22 786 aa25.27■■□□□ 1.64
ATXN3-253ENST00000621269 KCNV2Q8TDN2 545 aa25.27■■□□□ 1.64
ATXN3-253ENST00000621269 XPO6Q96QU8 1125 aaKnown RBP25.27■■□□□ 1.64
ATXN3-253ENST00000621269 CDK5RAP1Q96SZ6 601 aaKnown RBP25.27■■□□□ 1.64
ATXN3-253ENST00000621269 ARID3AQ99856 593 aa25.27■■□□□ 1.64
ATXN3-253ENST00000621269 BCCIPQ9P287 314 aaKnown RBP eCLIP25.27■■□□□ 1.64
ATXN3-253ENST00000621269 WDR35Q9P2L0 1181 aa25.27■■□□□ 1.64
ATXN3-253ENST00000621269 ARMCX3Q9UH62 379 aaPredicted RBP25.27■■□□□ 1.64
ATXN3-253ENST00000621269 USP3Q9Y6I4 520 aa25.27■■□□□ 1.64
ATXN3-253ENST00000621269 NEDD8-MDP1E9PL57 170 aa25.26■■□□□ 1.63
ATXN3-253ENST00000621269 MDM4O15151 490 aa25.26■■□□□ 1.63
ATXN3-253ENST00000621269 GREM1O60565 184 aa25.26■■□□□ 1.63
ATXN3-253ENST00000621269 PMS1P54277 932 aaKnown RBP25.26■■□□□ 1.63
ATXN3-253ENST00000621269 CREB5Q02930 508 aa25.26■■□□□ 1.63
ATXN3-253ENST00000621269 CBWD6Q4V339 395 aa25.26■■□□□ 1.63
ATXN3-253ENST00000621269 CBWD3Q5JTY5 395 aa25.26■■□□□ 1.63
ATXN3-253ENST00000621269 CBWD5Q5RIA9 395 aa25.26■■□□□ 1.63
ATXN3-253ENST00000621269 C10orf76Q5T2E6 689 aa25.26■■□□□ 1.63
ATXN3-253ENST00000621269 IL31Q6EBC2 164 aa25.26■■□□□ 1.63
ATXN3-253ENST00000621269 GRAMD4Q6IC98 578 aa25.26■■□□□ 1.63
ATXN3-253ENST00000621269 TPGS1Q6ZTW0 290 aa25.26■■□□□ 1.63
ATXN3-253ENST00000621269 TRMT11Q7Z4G4 463 aaKnown RBP25.26■■□□□ 1.63
ATXN3-253ENST00000621269 ZC3H3Q8IXZ2 948 aaKnown RBP25.26■■□□□ 1.63
ATXN3-253ENST00000621269 BBS2Q9BXC9 721 aa25.26■■□□□ 1.63
ATXN3-253ENST00000621269 UBXN6Q9BZV1 441 aa25.26■■□□□ 1.63
ATXN3-253ENST00000621269 DNAJC17Q9NVM6 304 aaKnown RBP25.26■■□□□ 1.63
ATXN3-253ENST00000621269 CLIC5Q9NZA1 410 aa25.26■■□□□ 1.63
ATXN3-253ENST00000621269 CEP250Q9BV73 2442 aa25.25■■□□□ 1.63
ATXN3-253ENST00000621269 ARHGAP17Q68EM7 881 aa25.25■■□□□ 1.63
ATXN3-253ENST00000621269 SCD5Q86SK9 330 aa25.25■■□□□ 1.63
ATXN3-253ENST00000621269 MIB1Q86YT6 1006 aa25.25■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms