RNA–Protein interactions for RNA: ENST00000621150.3

TNFAIP3-211, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 1,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-211ENST00000621150 PABPC5Q96DU9 382 aaKnown RBP13.01□□□□□ -0.33
TNFAIP3-211ENST00000621150 FUT8Q9BYC5 575 aa13.01□□□□□ -0.33
TNFAIP3-211ENST00000621150 ELAC1Q9H777 363 aaKnown RBP13.01□□□□□ -0.33
TNFAIP3-211ENST00000621150 ARFGAP3Q9NP61 516 aa13.01□□□□□ -0.33
TNFAIP3-211ENST00000621150 CRTAC1Q9NQ79 661 aa13.01□□□□□ -0.33
TNFAIP3-211ENST00000621150 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.01□□□□□ -0.33
TNFAIP3-211ENST00000621150 MAP2K7O14733 419 aa13□□□□□ -0.33
TNFAIP3-211ENST00000621150 ATP2C2O75185 946 aa13□□□□□ -0.33
TNFAIP3-211ENST00000621150 LRCH4O75427 683 aa13□□□□□ -0.33
TNFAIP3-211ENST00000621150 SASH3O75995 380 aa13□□□□□ -0.33
TNFAIP3-211ENST00000621150 ITGB1P05556 798 aa13□□□□□ -0.33
TNFAIP3-211ENST00000621150 RARAP10276 462 aa13□□□□□ -0.33
TNFAIP3-211ENST00000621150 PTPN1P18031 435 aaKnown RBP13□□□□□ -0.33
TNFAIP3-211ENST00000621150 PTPN7P35236 360 aa13□□□□□ -0.33
TNFAIP3-211ENST00000621150 LHX1P48742 406 aa13□□□□□ -0.33
TNFAIP3-211ENST00000621150 PLCB3Q01970 1234 aa13□□□□□ -0.33
TNFAIP3-211ENST00000621150 TXNRD3NBQ6F5E7 133 aa13□□□□□ -0.33
TNFAIP3-211ENST00000621150 CCDC70Q6NSX1 233 aa13□□□□□ -0.33
TNFAIP3-211ENST00000621150 ARCQ7LC44 396 aa13□□□□□ -0.33
TNFAIP3-211ENST00000621150 POLNQ7Z5Q5 900 aa13□□□□□ -0.33
TNFAIP3-211ENST00000621150 ZDHHC17Q8IUH5 632 aa13□□□□□ -0.33
TNFAIP3-211ENST00000621150 KLHL7Q8IXQ5 586 aa13□□□□□ -0.33
TNFAIP3-211ENST00000621150 EIF1ADQ8N9N8 165 aaKnown RBP13□□□□□ -0.33
TNFAIP3-211ENST00000621150 KLHL23Q8NBE8 558 aa13□□□□□ -0.33
TNFAIP3-211ENST00000621150 SPPL3Q8TCT6 385 aa13□□□□□ -0.33
TNFAIP3-211ENST00000621150 AENQ8WTP8 325 aaKnown RBP13□□□□□ -0.33
TNFAIP3-211ENST00000621150 HSFY1Q96LI6 401 aa13□□□□□ -0.33
TNFAIP3-211ENST00000621150 PKMYT1Q99640 499 aa13□□□□□ -0.33
TNFAIP3-211ENST00000621150 TGIF2Q9GZN2 237 aa13□□□□□ -0.33
TNFAIP3-211ENST00000621150 HESX1Q9UBX0 185 aa13□□□□□ -0.33
TNFAIP3-211ENST00000621150 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13□□□□□ -0.33
TNFAIP3-211ENST00000621150 ZSCAN5CA6NGD5 496 aaPredicted RBP12.99□□□□□ -0.33
TNFAIP3-211ENST00000621150 H3BQ06 376 aaPredicted RBP12.99□□□□□ -0.33
TNFAIP3-211ENST00000621150 TMEM189-UBE2V1I3L0A0 370 aa12.99□□□□□ -0.33
TNFAIP3-211ENST00000621150 XPO1O14980 1071 aaKnown RBP12.99□□□□□ -0.33
TNFAIP3-211ENST00000621150 PHF2O75151 1096 aa12.99□□□□□ -0.33
TNFAIP3-211ENST00000621150 HEXIM1O94992 359 aaKnown RBP12.99□□□□□ -0.33
TNFAIP3-211ENST00000621150 CSPG5O95196 566 aa12.99□□□□□ -0.33
TNFAIP3-211ENST00000621150 F12P00748 615 aaPredicted RBP12.99□□□□□ -0.33
TNFAIP3-211ENST00000621150 PTGIRP43119 386 aa12.99□□□□□ -0.33
TNFAIP3-211ENST00000621150 RGS7P49802 495 aa12.99□□□□□ -0.33
TNFAIP3-211ENST00000621150 ZNF143P52747 638 aaPredicted RBP12.99□□□□□ -0.33
TNFAIP3-211ENST00000621150 TAZQ16635 292 aa12.99□□□□□ -0.33
TNFAIP3-211ENST00000621150 CAPN12Q6ZSI9 719 aa12.99□□□□□ -0.33
TNFAIP3-211ENST00000621150 EP400NLQ6ZTU2 488 aa12.99□□□□□ -0.33
TNFAIP3-211ENST00000621150 CYP4V2Q6ZWL3 525 aaPredicted RBP12.99□□□□□ -0.33
TNFAIP3-211ENST00000621150 TMC7Q7Z402 723 aa12.99□□□□□ -0.33
TNFAIP3-211ENST00000621150 EMC1Q8N766 993 aa12.99□□□□□ -0.33
TNFAIP3-211ENST00000621150 RNF169Q8NCN4 708 aa12.99□□□□□ -0.33
TNFAIP3-211ENST00000621150 SUSD3Q96L08 255 aa12.99□□□□□ -0.33
TNFAIP3-211ENST00000621150 DUSP16Q9BY84 665 aa12.99□□□□□ -0.33
TNFAIP3-211ENST00000621150 SYNCQ9H7C4 482 aa12.99□□□□□ -0.33
TNFAIP3-211ENST00000621150 TMEM161AQ9NX61 479 aa12.99□□□□□ -0.33
TNFAIP3-211ENST00000621150 DDX43Q9NXZ2 648 aaKnown RBP12.99□□□□□ -0.33
TNFAIP3-211ENST00000621150 CLDND1Q9NY35 253 aa12.99□□□□□ -0.33
TNFAIP3-211ENST00000621150 PCYOX1Q9UHG3 505 aa12.99□□□□□ -0.33
TNFAIP3-211ENST00000621150 AMACRQ9UHK6 382 aa12.99□□□□□ -0.33
TNFAIP3-211ENST00000621150 TDRD15B5MCY1 1934 aaKnown RBP12.99□□□□□ -0.33
TNFAIP3-211ENST00000621150 C3orf70A6NLC5 250 aaPredicted RBP12.99□□□□□ -0.33
TNFAIP3-211ENST00000621150 TBKBP1A7MCY6 615 aa12.99□□□□□ -0.33
TNFAIP3-211ENST00000621150 ERLIN1O75477 346 aa12.99□□□□□ -0.33
TNFAIP3-211ENST00000621150 B3GAT3O94766 335 aa12.99□□□□□ -0.33
TNFAIP3-211ENST00000621150 DDHD2O94830 711 aa12.99□□□□□ -0.33
TNFAIP3-211ENST00000621150 IL9P15248 144 aa12.99□□□□□ -0.33
TNFAIP3-211ENST00000621150 ACAT1P24752 427 aaKnown RBP12.99□□□□□ -0.33
TNFAIP3-211ENST00000621150 PSMA2P25787 234 aa12.99□□□□□ -0.33
TNFAIP3-211ENST00000621150 IL1R2P27930 398 aa12.99□□□□□ -0.33
TNFAIP3-211ENST00000621150 ADORA2BP29275 332 aa12.99□□□□□ -0.33
TNFAIP3-211ENST00000621150 ECHS1P30084 290 aa12.99□□□□□ -0.33
TNFAIP3-211ENST00000621150 PCK1P35558 622 aa12.99□□□□□ -0.33
TNFAIP3-211ENST00000621150 FLT3P36888 993 aa12.99□□□□□ -0.33
TNFAIP3-211ENST00000621150 LTBRP36941 435 aa12.99□□□□□ -0.33
TNFAIP3-211ENST00000621150 SLC6A3Q01959 620 aa12.99□□□□□ -0.33
TNFAIP3-211ENST00000621150 HYAL1Q12794 435 aa12.99□□□□□ -0.33
TNFAIP3-211ENST00000621150 CTC1Q2NKJ3 1217 aa12.99□□□□□ -0.33
TNFAIP3-211ENST00000621150 ATP13A4Q4VNC1 1196 aa12.99□□□□□ -0.33
TNFAIP3-211ENST00000621150 FAM102AQ5T9C2 384 aaPredicted RBP12.99□□□□□ -0.33
TNFAIP3-211ENST00000621150 PTCRAQ6ISU1 281 aaPredicted RBP12.99□□□□□ -0.33
TNFAIP3-211ENST00000621150 TTC27Q6P3X3 843 aa12.99□□□□□ -0.33
TNFAIP3-211ENST00000621150 FAM171BQ6P995 826 aa12.99□□□□□ -0.33
TNFAIP3-211ENST00000621150 DCLRE1AQ6PJP8 1040 aa12.99□□□□□ -0.33
TNFAIP3-211ENST00000621150 GLB1LQ6UWU2 654 aa12.99□□□□□ -0.33
TNFAIP3-211ENST00000621150 SLC26A9Q7LBE3 791 aa12.99□□□□□ -0.33
TNFAIP3-211ENST00000621150 ZNF280BQ86YH2 543 aa12.99□□□□□ -0.33
TNFAIP3-211ENST00000621150 COLGALT2Q8IYK4 626 aa12.99□□□□□ -0.33
TNFAIP3-211ENST00000621150 POF1BQ8WVV4 589 aa12.99□□□□□ -0.33
TNFAIP3-211ENST00000621150 CASKIN2Q8WXE0 1202 aa12.99□□□□□ -0.33
TNFAIP3-211ENST00000621150 RSPH1Q8WYR4 309 aa12.99□□□□□ -0.33
TNFAIP3-211ENST00000621150 KCTD13Q8WZ19 329 aa12.99□□□□□ -0.33
TNFAIP3-211ENST00000621150 SLITRK1Q96PX8 696 aa12.99□□□□□ -0.33
TNFAIP3-211ENST00000621150 SYT15Q9BQS2 421 aa12.99□□□□□ -0.33
TNFAIP3-211ENST00000621150 B3GNT5Q9BYG0 378 aa12.99□□□□□ -0.33
TNFAIP3-211ENST00000621150 RBCK1Q9BYM8 510 aa12.99□□□□□ -0.33
TNFAIP3-211ENST00000621150 DNAI2Q9GZS0 605 aa12.99□□□□□ -0.33
TNFAIP3-211ENST00000621150 LRRC19Q9H756 370 aa12.99□□□□□ -0.33
TNFAIP3-211ENST00000621150 CAPN10Q9HC96 672 aa12.99□□□□□ -0.33
TNFAIP3-211ENST00000621150 CD320Q9NPF0 282 aa12.99□□□□□ -0.33
TNFAIP3-211ENST00000621150 ST7Q9NRC1 585 aa12.99□□□□□ -0.33
TNFAIP3-211ENST00000621150 HCSTQ9UBK5 93 aa12.99□□□□□ -0.33
TNFAIP3-211ENST00000621150 CDH9Q9ULB4 789 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms